메뉴 건너뛰기




Volumn 27, Issue , 2014, Pages 92-101

A mechanistic link between gene regulation and genome architecture in mammalian development

Author keywords

[No Author keywords available]

Indexed keywords

CELL PROTEIN; GENOMIC DNA; CHROMATIN;

EID: 84903785480     PISSN: 0959437X     EISSN: 18790380     Source Type: Journal    
DOI: 10.1016/j.gde.2014.05.002     Document Type: Review
Times cited : (36)

References (63)
  • 1
    • 0037083376 scopus 로고    scopus 로고
    • Capturing chromosome conformation
    • Dekker J., Rippe K., Dekker M., Kleckner N. Capturing chromosome conformation. Science 2002, 295:1306-1311. 10.1126/science.1067799.
    • (2002) Science , vol.295 , pp. 1306-1311
    • Dekker, J.1    Rippe, K.2    Dekker, M.3    Kleckner, N.4
  • 2
    • 84878011578 scopus 로고    scopus 로고
    • Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data
    • Dekker J., Marti-Renom M.A., Mirny L.A. Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data. Nat Rev Genet 2013, 14:390-403. 10.1038/nrg3454.
    • (2013) Nat Rev Genet , vol.14 , pp. 390-403
    • Dekker, J.1    Marti-Renom, M.A.2    Mirny, L.A.3
  • 3
    • 84855297335 scopus 로고    scopus 로고
    • A decade of 3C technologies: insights into nuclear organization
    • de Wit E., de Laat W. A decade of 3C technologies: insights into nuclear organization. Genes Dev 2012, 26:11-24. 10.1101/gad.179804.111.
    • (2012) Genes Dev , vol.26 , pp. 11-24
    • de Wit, E.1    de Laat, W.2
  • 4
    • 84876838711 scopus 로고    scopus 로고
    • The hierarchy of the 3D genome
    • Gibcus J.H., Dekker J. The hierarchy of the 3D genome. Mol Cell 2013, 49:773-782. 10.1016/j.molcel.2013.02.011.
    • (2013) Mol Cell , vol.49 , pp. 773-782
    • Gibcus, J.H.1    Dekker, J.2
  • 5
    • 84875190221 scopus 로고    scopus 로고
    • Genome architecture: domain organization of interphase chromosomes
    • Bickmore W.A., van Steensel B. Genome architecture: domain organization of interphase chromosomes. Cell 2013, 152:1270-1284. 10.1016/j.cell.2013.02.001.
    • (2013) Cell , vol.152 , pp. 1270-1284
    • Bickmore, W.A.1    van Steensel, B.2
  • 6
    • 84879232679 scopus 로고    scopus 로고
    • Genome organization and long-range regulation of gene expression by enhancers
    • Smallwood A., Ren B. Genome organization and long-range regulation of gene expression by enhancers. Curr Opin Cell Biol 2013, 25:387-394. 10.1016/j.ceb.2013.02.005.
    • (2013) Curr Opin Cell Biol , vol.25 , pp. 387-394
    • Smallwood, A.1    Ren, B.2
  • 7
    • 84871933637 scopus 로고    scopus 로고
    • Pluripotency in 3D: genome organization in pluripotent cells
    • Denholtz M., Plath K. Pluripotency in 3D: genome organization in pluripotent cells. Curr Opin Cell Biol 2012, 24:793-801. 10.1016/j.ceb.2012.11.001.
    • (2012) Curr Opin Cell Biol , vol.24 , pp. 793-801
    • Denholtz, M.1    Plath, K.2
  • 8
    • 84892474589 scopus 로고    scopus 로고
    • Polycomb silencing: from linear chromatin domains to 3D chromosome folding
    • Cheutin T., Cavalli G. Polycomb silencing: from linear chromatin domains to 3D chromosome folding. Curr Opin Genet Dev 2014, 25C:30-37. 10.1016/j.gde.2013.11.016.
    • (2014) Curr Opin Genet Dev , vol.25 C , pp. 30-37
    • Cheutin, T.1    Cavalli, G.2
  • 9
    • 70349873824 scopus 로고    scopus 로고
    • Comprehensive mapping of long-range interactions reveals folding principles of the human genome
    • Lieberman-Aiden E., et al. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science 2009, 326:289-293. 10.1126/science.1181369.
    • (2009) Science , vol.326 , pp. 289-293
    • Lieberman-Aiden, E.1
  • 10
    • 75649092667 scopus 로고    scopus 로고
    • Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis
    • Hiratani I., et al. Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis. Genome Res 2010, 20:155-169. 10.1101/gr.099796.109.
    • (2010) Genome Res , vol.20 , pp. 155-169
    • Hiratani, I.1
  • 11
    • 84869502375 scopus 로고    scopus 로고
    • Global changes in the nuclear positioning of genes and intra- and interdomain genomic interactions that orchestrate B cell fate
    • Lin Y.C., et al. Global changes in the nuclear positioning of genes and intra- and interdomain genomic interactions that orchestrate B cell fate. Nat Immunol 2012, 13:1196-1204. 10.1038/ni.2432.
    • (2012) Nat Immunol , vol.13 , pp. 1196-1204
    • Lin, Y.C.1
  • 12
    • 84869002200 scopus 로고    scopus 로고
    • Nuclear aggregation of olfactory receptor genes governs their monogenic expression
    • Clowney E.J., et al. Nuclear aggregation of olfactory receptor genes governs their monogenic expression. Cell 2012, 151:724-737. 10.1016/j.cell.2012.09.043.
    • (2012) Cell , vol.151 , pp. 724-737
    • Clowney, E.J.1
  • 13
    • 85027929606 scopus 로고    scopus 로고
    • Long-range chromatin contacts in embryonic stem cells reveal a role for pluripotency factors and polycomb proteins in genome organization
    • Denholtz M., et al. Long-range chromatin contacts in embryonic stem cells reveal a role for pluripotency factors and polycomb proteins in genome organization. Cell Stem Cell 2013, 13:602-616. 10.1016/j.stem.2013.08.013.
    • (2013) Cell Stem Cell , vol.13 , pp. 602-616
    • Denholtz, M.1
  • 14
    • 84887852466 scopus 로고    scopus 로고
    • Genome-wide chromatin interactions of the Nanog locus in pluripotency, differentiation, and reprogramming
    • Apostolou E., et al. Genome-wide chromatin interactions of the Nanog locus in pluripotency, differentiation, and reprogramming. Cell Stem Cell 2013, 12:699-712. 10.1016/j.stem.2013.04.013.
    • (2013) Cell Stem Cell , vol.12 , pp. 699-712
    • Apostolou, E.1
  • 15
    • 84884134904 scopus 로고    scopus 로고
    • The pluripotent genome in three dimensions is shaped around pluripotency factors
    • de Wit E., et al. The pluripotent genome in three dimensions is shaped around pluripotency factors. Nature 2013, 501:227-231. 10.1038/nature12420.
    • (2013) Nature , vol.501 , pp. 227-231
    • de Wit, E.1
  • 16
    • 84870495610 scopus 로고    scopus 로고
    • TNFalpha signals through specialized factories where responsive coding and miRNA genes are transcribed
    • Papantonis A., et al. TNFalpha signals through specialized factories where responsive coding and miRNA genes are transcribed. EMBO J 2012, 31:4404-4414. 10.1038/emboj.2012.288.
    • (2012) EMBO J , vol.31 , pp. 4404-4414
    • Papantonis, A.1
  • 17
    • 84861095603 scopus 로고    scopus 로고
    • Topological domains in mammalian genomes identified by analysis of chromatin interactions
    • Dixon J.R., et al. Topological domains in mammalian genomes identified by analysis of chromatin interactions. Nature 2012, 485:376-380. 10.1038/nature11082.
    • (2012) Nature , vol.485 , pp. 376-380
    • Dixon, J.R.1
  • 18
    • 84861100147 scopus 로고    scopus 로고
    • Spatial partitioning of the regulatory landscape of the X-inactivation centre
    • Nora E.P., et al. Spatial partitioning of the regulatory landscape of the X-inactivation centre. Nature 2012, 485:381-385. 10.1038/nature11049.
    • (2012) Nature , vol.485 , pp. 381-385
    • Nora, E.P.1
  • 19
    • 84856747483 scopus 로고    scopus 로고
    • Three-dimensional folding and functional organization principles of the Drosophila genome
    • Sexton T., et al. Three-dimensional folding and functional organization principles of the Drosophila genome. Cell 2012, 148:458-472. 10.1016/j.cell.2012.01.010.
    • (2012) Cell , vol.148 , pp. 458-472
    • Sexton, T.1
  • 20
    • 84864462544 scopus 로고    scopus 로고
    • A map of the cis-regulatory sequences in the mouse genome
    • Shen Y., et al. A map of the cis-regulatory sequences in the mouse genome. Nature 2012, 488:116-120. 10.1038/nature11243.
    • (2012) Nature , vol.488 , pp. 116-120
    • Shen, Y.1
  • 21
    • 84878860751 scopus 로고    scopus 로고
    • Architectural protein subclasses shape 3D organization of genomes during lineage commitment
    • Phillips-Cremins J.E., et al. Architectural protein subclasses shape 3D organization of genomes during lineage commitment. Cell 2013, 153:1281-1295. 10.1016/j.cell.2013.04.053.
    • (2013) Cell , vol.153 , pp. 1281-1295
    • Phillips-Cremins, J.E.1
  • 22
    • 84887835943 scopus 로고    scopus 로고
    • Klf4 organizes long-range chromosomal interactions with the oct4 locus in reprogramming and pluripotency
    • Wei Z., et al. Klf4 organizes long-range chromosomal interactions with the oct4 locus in reprogramming and pluripotency. Cell Stem Cell 2013, 13:36-47. 10.1016/j.stem.2013.05.010.
    • (2013) Cell Stem Cell , vol.13 , pp. 36-47
    • Wei, Z.1
  • 23
    • 84890566970 scopus 로고    scopus 로고
    • Cohesin-mediated interactions organize chromosomal domain architecture
    • Sofueva S., et al. Cohesin-mediated interactions organize chromosomal domain architecture. EMBO J 2013, 32:3119-3129. 10.1038/emboj.2013.237.
    • (2013) EMBO J , vol.32 , pp. 3119-3129
    • Sofueva, S.1
  • 24
    • 84892934183 scopus 로고    scopus 로고
    • Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells
    • Zuin J., et al. Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells. Proc Natl Acad Sci USA 2013, 10.1073/pnas.1317788111.
    • (2013) Proc Natl Acad Sci USA
    • Zuin, J.1
  • 25
    • 34248196445 scopus 로고    scopus 로고
    • Rise, fall and resurrection of chromosome territories: a historical perspective. Part I. The rise of chromosome territories
    • Cremer T., Cremer C. Rise, fall and resurrection of chromosome territories: a historical perspective. Part I. The rise of chromosome territories. Eur J Histochem 2006, 50:161-176.
    • (2006) Eur J Histochem , vol.50 , pp. 161-176
    • Cremer, T.1    Cremer, C.2
  • 26
    • 33847775659 scopus 로고    scopus 로고
    • Rise, fall and resurrection of chromosome territories: a historical perspective. Part II. Fall and resurrection of chromosome territories during the 1950s to 1980s. Part III. Chromosome territories and the functional nuclear architecture: experiments and models from the 1990s to the present
    • Cremer T., Cremer C. Rise, fall and resurrection of chromosome territories: a historical perspective. Part II. Fall and resurrection of chromosome territories during the 1950s to 1980s. Part III. Chromosome territories and the functional nuclear architecture: experiments and models from the 1990s to the present. Eur J Histochem 2006, 50:223-272.
    • (2006) Eur J Histochem , vol.50 , pp. 223-272
    • Cremer, T.1    Cremer, C.2
  • 28
    • 84887322004 scopus 로고    scopus 로고
    • High-resolution mapping of the spatial organization of a bacterial chromosome
    • Le T.B., Imakaev M.V., Mirny L.A., Laub M.T. High-resolution mapping of the spatial organization of a bacterial chromosome. Science 2013, 342:731-734. 10.1126/science.1242059.
    • (2013) Science , vol.342 , pp. 731-734
    • Le, T.B.1    Imakaev, M.V.2    Mirny, L.A.3    Laub, M.T.4
  • 29
    • 0037023361 scopus 로고    scopus 로고
    • Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development
    • Kosak S.T., et al. Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development. Science 2002, 296:158-162. 10.1126/science.1068768.
    • (2002) Science , vol.296 , pp. 158-162
    • Kosak, S.T.1
  • 30
    • 77952576224 scopus 로고    scopus 로고
    • Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation
    • Peric-Hupkes D., et al. Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation. Mol Cell 2010, 38:603-613. 10.1016/j.molcel.2010.03.016.
    • (2010) Mol Cell , vol.38 , pp. 603-613
    • Peric-Hupkes, D.1
  • 31
    • 33747195353 scopus 로고    scopus 로고
    • Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
    • Takahashi K., Yamanaka S. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 2006, 126:663-676. 10.1016/j.cell.2006.07.024.
    • (2006) Cell , vol.126 , pp. 663-676
    • Takahashi, K.1    Yamanaka, S.2
  • 32
    • 84889993685 scopus 로고    scopus 로고
    • Murine esBAF chromatin remodeling complex subunits BAF250a and Brg1 are necessary to maintain and reprogram pluripotency-specific replication timing of select replication domains
    • Takebayashi S., et al. Murine esBAF chromatin remodeling complex subunits BAF250a and Brg1 are necessary to maintain and reprogram pluripotency-specific replication timing of select replication domains. Epigenetics Chromatin 2013, 6:42. 10.1186/1756-8935-6-42.
    • (2013) Epigenetics Chromatin , vol.6 , pp. 42
    • Takebayashi, S.1
  • 33
    • 78651514974 scopus 로고    scopus 로고
    • Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila
    • Bantignies F., et al. Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila. Cell 2011, 144:214-226. 10.1016/j.cell.2010.12.026.
    • (2011) Cell , vol.144 , pp. 214-226
    • Bantignies, F.1
  • 34
    • 84893155560 scopus 로고    scopus 로고
    • Intrachromosomal looping is required for activation of endogenous pluripotency genes during reprogramming
    • Zhang H., et al. Intrachromosomal looping is required for activation of endogenous pluripotency genes during reprogramming. Cell Stem Cell 2013, 13:30-35. 10.1016/j.stem.2013.05.012.
    • (2013) Cell Stem Cell , vol.13 , pp. 30-35
    • Zhang, H.1
  • 35
    • 84886777912 scopus 로고    scopus 로고
    • Chromosomal contact permits transcription between coregulated genes
    • Fanucchi S., Shibayama Y., Burd S., Weinberg M.S., Mhlanga M.M. Chromosomal contact permits transcription between coregulated genes. Cell 2013, 155:606-620. 10.1016/j.cell.2013.09.051.
    • (2013) Cell , vol.155 , pp. 606-620
    • Fanucchi, S.1    Shibayama, Y.2    Burd, S.3    Weinberg, M.S.4    Mhlanga, M.M.5
  • 36
    • 73349090560 scopus 로고    scopus 로고
    • Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells
    • Schoenfelder S., et al. Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells. Nat Genet 2010, 42:53-61.
    • (2010) Nat Genet , vol.42 , pp. 53-61
    • Schoenfelder, S.1
  • 37
    • 34250729138 scopus 로고    scopus 로고
    • Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs
    • Rinn J.L., et al. Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs. Cell 2007, 129:1311-1323. 10.1016/j.cell.2007.05.022.
    • (2007) Cell , vol.129 , pp. 1311-1323
    • Rinn, J.L.1
  • 38
    • 84879642373 scopus 로고    scopus 로고
    • The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome
    • Engreitz J.M., et al. The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome. Science 2013, 341:1237973. 10.1126/science.1237973.
    • (2013) Science , vol.341 , pp. 1237973
    • Engreitz, J.M.1
  • 39
    • 84865800494 scopus 로고    scopus 로고
    • The long-range interaction landscape of gene promoters
    • Sanyal A., Lajoie B.R., Jain G., Dekker J. The long-range interaction landscape of gene promoters. Nature 2012, 489:109-113. 10.1038/nature11279.
    • (2012) Nature , vol.489 , pp. 109-113
    • Sanyal, A.1    Lajoie, B.R.2    Jain, G.3    Dekker, J.4
  • 40
    • 84878754528 scopus 로고    scopus 로고
    • A switch between topological domains underlies HoxD genes collinearity in mouse limbs
    • Andrey G., et al. A switch between topological domains underlies HoxD genes collinearity in mouse limbs. Science 2013, 340:1234167. 10.1126/science.1234167.
    • (2013) Science , vol.340 , pp. 1234167
    • Andrey, G.1
  • 41
    • 84879695128 scopus 로고    scopus 로고
    • Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation
    • Li W., et al. Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. Nature 2013, 498:516-520. 10.1038/nature12210.
    • (2013) Nature , vol.498 , pp. 516-520
    • Li, W.1
  • 42
    • 84894589713 scopus 로고    scopus 로고
    • Interactome maps of mouse gene regulatory domains reveal basic principles of transcriptional regulation
    • Kieffer-Kwon K.R., et al. Interactome maps of mouse gene regulatory domains reveal basic principles of transcriptional regulation. Cell 2013, 155:1507-1520. 10.1016/j.cell.2013.11.039.
    • (2013) Cell , vol.155 , pp. 1507-1520
    • Kieffer-Kwon, K.R.1
  • 43
    • 84881024808 scopus 로고    scopus 로고
    • DNase I-hypersensitive exons colocalize with promoters and distal regulatory elements
    • Mercer T.R., et al. DNase I-hypersensitive exons colocalize with promoters and distal regulatory elements. Nat Genet 2013, 45:852-859. 10.1038/ng.2677.
    • (2013) Nat Genet , vol.45 , pp. 852-859
    • Mercer, T.R.1
  • 44
    • 84887620842 scopus 로고    scopus 로고
    • A high-resolution map of the three-dimensional chromatin interactome in human cells
    • Jin F., et al. A high-resolution map of the three-dimensional chromatin interactome in human cells. Nature 2013, 503:290-294. 10.1038/nature12644.
    • (2013) Nature , vol.503 , pp. 290-294
    • Jin, F.1
  • 45
    • 84894579192 scopus 로고    scopus 로고
    • Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release
    • Liu W., et al. Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release. Cell 2013, 155:1581-1595. 10.1016/j.cell.2013.10.056.
    • (2013) Cell , vol.155 , pp. 1581-1595
    • Liu, W.1
  • 46
    • 84879208137 scopus 로고    scopus 로고
    • Cohesin at active genes: a unifying theme for cohesin and gene expression from model organisms to humans
    • Dorsett D., Merkenschlager M. Cohesin at active genes: a unifying theme for cohesin and gene expression from model organisms to humans. Curr Opin Cell Biol 2013, 25:327-333. 10.1016/j.ceb.2013.02.003.
    • (2013) Curr Opin Cell Biol , vol.25 , pp. 327-333
    • Dorsett, D.1    Merkenschlager, M.2
  • 47
    • 77957139539 scopus 로고    scopus 로고
    • Mediator and cohesin connect gene expression and chromatin architecture
    • Kagey M.H., et al. Mediator and cohesin connect gene expression and chromatin architecture. Nature 2010, 467:430-435. 10.1038/nature09380.
    • (2010) Nature , vol.467 , pp. 430-435
    • Kagey, M.H.1
  • 48
    • 38849121606 scopus 로고    scopus 로고
    • Cohesins functionally associate with CTCF on mammalian chromosome arms
    • Parelho V., et al. Cohesins functionally associate with CTCF on mammalian chromosome arms. Cell 2008, 132:422-433. 10.1016/j.cell.2008.01.011.
    • (2008) Cell , vol.132 , pp. 422-433
    • Parelho, V.1
  • 49
    • 67650997080 scopus 로고    scopus 로고
    • Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus
    • Hadjur S., et al. Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus. Nature 2009, 460:410-413. 10.1038/nature08079.
    • (2009) Nature , vol.460 , pp. 410-413
    • Hadjur, S.1
  • 50
    • 46149113242 scopus 로고    scopus 로고
    • CTCF physically links cohesin to chromatin
    • Rubio E.D., et al. CTCF physically links cohesin to chromatin. Proc Natl Acad Sci USA 2008, 105:8309-8314. 10.1073/pnas.0801273105.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 8309-8314
    • Rubio, E.D.1
  • 51
    • 39149121436 scopus 로고    scopus 로고
    • Cohesin mediates transcriptional insulation by CCCTC-binding factor
    • Wendt K.S., et al. Cohesin mediates transcriptional insulation by CCCTC-binding factor. Nature 2008, 451:796-801. 10.1038/nature06634.
    • (2008) Nature , vol.451 , pp. 796-801
    • Wendt, K.S.1
  • 52
    • 79959699992 scopus 로고    scopus 로고
    • CTCF-mediated functional chromatin interactome in pluripotent cells
    • Handoko L., et al. CTCF-mediated functional chromatin interactome in pluripotent cells. Nat Genet 2011, 43:630-638. 10.1038/ng.857.
    • (2011) Nat Genet , vol.43 , pp. 630-638
    • Handoko, L.1
  • 53
    • 76749089660 scopus 로고    scopus 로고
    • A comprehensive map of insulator elements for the Drosophila genome
    • Negre N., et al. A comprehensive map of insulator elements for the Drosophila genome. PLoS Genet 2010, 6:e1000814. 10.1371/journal.pgen.1000814.
    • (2010) PLoS Genet , vol.6
    • Negre, N.1
  • 54
    • 84868334509 scopus 로고    scopus 로고
    • Nature and function of insulator protein binding sites in the Drosophila genome
    • Schwartz Y.B., et al. Nature and function of insulator protein binding sites in the Drosophila genome. Genome Res 2012, 22:2188-2198. 10.1101/gr.138156.112.
    • (2012) Genome Res , vol.22 , pp. 2188-2198
    • Schwartz, Y.B.1
  • 55
    • 84892934183 scopus 로고    scopus 로고
    • Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells
    • Zuin J., et al. Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells. Proc Natl Acad Sci USA 2014, 111:996-1001. 10.1073/pnas.1317788111.
    • (2014) Proc Natl Acad Sci USA , vol.111 , pp. 996-1001
    • Zuin, J.1
  • 56
    • 84885617426 scopus 로고    scopus 로고
    • Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
    • Nagano T., et al. Single-cell Hi-C reveals cell-to-cell variability in chromosome structure. Nature 2013, 502:59-64. 10.1038/nature12593.
    • (2013) Nature , vol.502 , pp. 59-64
    • Nagano, T.1
  • 57
    • 33750212321 scopus 로고    scopus 로고
    • Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C)
    • Simonis M., et al. Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C). Nat Genet 2006, 38:1348-1354. 10.1038/ng1896.
    • (2006) Nat Genet , vol.38 , pp. 1348-1354
    • Simonis, M.1
  • 58
    • 33750203582 scopus 로고    scopus 로고
    • Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions
    • Zhao Z., et al. Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions. Nat Genet 2006, 38:1341-1347. 10.1038/ng1891.
    • (2006) Nat Genet , vol.38 , pp. 1341-1347
    • Zhao, Z.1
  • 59
    • 79959952919 scopus 로고    scopus 로고
    • The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA
    • Splinter E., et al. The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA. Genes Dev 2011, 25:1371-1383. 10.1101/gad.633311.
    • (2011) Genes Dev , vol.25 , pp. 1371-1383
    • Splinter, E.1
  • 60
    • 33749400168 scopus 로고    scopus 로고
    • Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements
    • Dostie J., et al. Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements. Genome Res 2006, 16:1299-1309. 10.1101/gr.5571506.
    • (2006) Genome Res , vol.16 , pp. 1299-1309
    • Dostie, J.1
  • 61
    • 80055118988 scopus 로고    scopus 로고
    • Hi-C: a method to study the three-dimensional architecture of genomes
    • van Berkum N.L., et al. Hi-C: a method to study the three-dimensional architecture of genomes. J Vis Exp 2010, 10.3791/1869.
    • (2010) J Vis Exp
    • van Berkum, N.L.1
  • 62
    • 84862917808 scopus 로고    scopus 로고
    • Genome architectures revealed by tethered chromosome conformation capture and population-based modeling
    • Kalhor R., Tjong H., Jayathilaka N., Alber F., Chen L. Genome architectures revealed by tethered chromosome conformation capture and population-based modeling. Nat Biotechnol 2012, 30:90-98. 10.1038/nbt.2057.
    • (2012) Nat Biotechnol , vol.30 , pp. 90-98
    • Kalhor, R.1    Tjong, H.2    Jayathilaka, N.3    Alber, F.4    Chen, L.5
  • 63
    • 70449103609 scopus 로고    scopus 로고
    • An oestrogen-receptor-alpha-bound human chromatin interactome
    • Fullwood M.J., et al. An oestrogen-receptor-alpha-bound human chromatin interactome. Nature 2009, 462:58-64. 10.1038/nature08497.
    • (2009) Nature , vol.462 , pp. 58-64
    • Fullwood, M.J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.