메뉴 건너뛰기




Volumn 52, Issue 7, 2014, Pages 2583-2594

Microbial profiling of combat wound infection through detection microarray and next-generation sequencing

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84903753515     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.00556-14     Document Type: Article
Times cited : (43)

References (42)
  • 1
    • 45549088996 scopus 로고    scopus 로고
    • Invasion vs insurgency: US Navy/Marine corps forward surgical care during operation iraqi freedom
    • DOI 10.1001/archsurg.143.6.564
    • Brethauer SA, Chao A, Chambers LW, Green DJ, Brown C, Rhee P, Bohman HR. 2008. Invasion vs insurgency: US Navy/Marine Corps forward surgical care during Operation Iraqi Freedom. Arch. Surg. 143:564-569. http://dx.doi.org/10.1001/ archsurg.143.6.564 (Pubitemid 351860841)
    • (2008) Archives of Surgery , vol.143 , Issue.6 , pp. 564-569
    • Brethauer, S.A.1    Chao, A.2    Chambers, L.W.3    Green, D.J.4    Brown, C.5    Rhee, P.6    Bohman, H.R.7
  • 2
    • 77953023871 scopus 로고    scopus 로고
    • Incidence of primary blast injury in US military overseas contingency operations: A retrospective study
    • Ritenour AE, Blackbourne LH, Kelly JF, McLaughlin DF, Pearse LA, Holcomb JB, Wade CE. 2010. Incidence of primary blast injury in US military overseas contingency operations: a retrospective study. Ann. Surg. 251:1140-1144. http://dx.doi.org/10.1097/SLA.0b013e3181e01270
    • (2010) Ann. Surg , vol.251 , pp. 1140-1144
    • Ritenour, A.E.1    Blackbourne, L.H.2    Kelly, J.F.3    McLaughlin, D.F.4    Pearse, L.A.5    Holcomb, J.B.6    Wade, C.E.7
  • 3
    • 77958538046 scopus 로고    scopus 로고
    • Improvised explosive devices: Pathophysiology, injury profiles and current medical management
    • Ramasamy A, Hill AM, Clasper JC. 2009. Improvised explosive devices: pathophysiology, injury profiles and current medical management. J. R. Army Med. Corps. 155:265-272. http://dx.doi.org/10.1136 /jramc-155-04-05
    • (2009) J. R. Army Med. Corps , vol.155 , pp. 265-272
    • Ramasamy, A.1    Hill, A.M.2    Clasper, J.C.3
  • 6
    • 80155210514 scopus 로고    scopus 로고
    • Inflammatory response is associated with critical colonization in combat wounds
    • Brown TS, Hawksworth JS, Sheppard FR, Tadaki DK, Elster E. 2011 .Inflammatory response is associated with critical colonization in combat wounds. Surg. Infect. (Larchmt.) 12:351-357. http://dx.doi.org/10.1089 /sur.2010.110
    • (2011) Surg. Infect. (Larchmt.) , vol.12 , pp. 351-357
    • Brown, T.S.1    Hawksworth, J.S.2    Sheppard, F.R.3    Tadaki, D.K.4    Elster, E.5
  • 8
    • 0035071319 scopus 로고    scopus 로고
    • Wound microbiology and associated approaches to wound management
    • DOI 10.1128/CMR.14.2.244-269.2001
    • Bowler PG, Duerden BI, Armstrong DG. 2001. Wound microbiology and associated approaches to wound management. Clin. Microbiol. Rev. 14:244-269. http://dx.doi.org/10.1128/CMR.14.2.244-269.2001. (Pubitemid 32294670)
    • (2001) Clinical Microbiology Reviews , vol.14 , Issue.2 , pp. 244-269
    • Bowler, P.G.1    Duerden, B.I.2    Armstrong, D.G.3
  • 9
    • 0037270457 scopus 로고    scopus 로고
    • The clinical relevance of microbiology in acute and chronic wounds
    • quiz, 24-25
    • McGuckin M, Goldman R, Bolton L, Salcido R. 2003. The clinical relevance of microbiology in acute and chronic wounds. Adv. Skin Wound Care 16:12-23; quiz, 24-25. http://dx.doi.org/10.1097/00129334-200301000-00011.
    • (2003) Adv. Skin Wound Care , vol.16 , pp. 12-23
    • McGuckin, M.1    Goldman, R.2    Bolton, L.3    Salcido, R.4
  • 10
    • 3843069912 scopus 로고    scopus 로고
    • Use of 16S ribosomal DNA PCR and denaturing gradient gel electrophoresis for analysis of the microfloras of healing and nonhealing chronic venous leg ulcers
    • DOI 10.1128/JCM.42.8.3549-3557.2004
    • Davies CE, Hill KE, Wilson MJ, Stephens P, Hill CM, Harding KG, Thomas DW. 2004. Use of 16S ribosomal DNA PCR and denaturing gradient gel electrophoresis for analysis of the microfloras of healing and nonhealing chronic venous leg ulcers. J. Clin. Microbiol. 42:3549-3557. http://dx.doi.org/10.1128/JCM.42.8.3549-3557.2004. (Pubitemid 39045679)
    • (2004) Journal of Clinical Microbiology , vol.42 , Issue.8 , pp. 3549-3557
    • Davies, C.E.1    Hill, K.E.2    Wilson, M.J.3    Stephens, P.4    Hill, C.M.5    Harding, K.G.6    Thomas, D.W.7
  • 11
    • 38349090456 scopus 로고    scopus 로고
    • Microscopic and physiologic evidence for biofilm-associated wound colonization in vivo
    • Davis SC, Ricotti C, Cazzaniga A, Welsh E, Eaglstein WH, Mertz PM. 2008. Microscopic and physiologic evidence for biofilm-associated wound colonization in vivo. Wound Repair Regen. 16:23-29. http://dx.doi.org/10.1111/j.1524-475X. 2007.00303.x.
    • (2008) Wound Repair Regen , vol.16 , pp. 23-29
    • Davis, S.C.1    Ricotti, C.2    Cazzaniga, A.3    Welsh, E.4    Eaglstein, W.H.5    Mertz, P.M.6
  • 12
    • 67549124954 scopus 로고    scopus 로고
    • Clinical experience with wound biofilm and management: A case series
    • Hurlow J, Bowler PG. 2009. Clinical experience with wound biofilm and management: a case series. Ostomy Wound Manage. 55:38-49.
    • (2009) Ostomy Wound Manage , vol.55 , pp. 38-49
    • Hurlow, J.1    Bowler, P.G.2
  • 13
    • 33847356485 scopus 로고    scopus 로고
    • Infection following soft tissue injury: Its role in wound healing
    • DOI 10.1097/QCO.0b013e32801a3e7c, PII 0000143220070400000004
    • Ryan TJ. 2007. Infection following soft tissue injury: its role in wound healing. Curr. Opin. Infect. Dis. 20:124-128. http://dx.doi.org/10.1097/QCO. 0b013e32801a3e7c. (Pubitemid 46340793)
    • (2007) Current Opinion in Infectious Diseases , vol.20 , Issue.2 , pp. 124-128
    • Ryan, T.J.1
  • 14
    • 70350246127 scopus 로고    scopus 로고
    • Defining wound microbial flora: Molecular microbiology opening new horizons
    • Frankel YM, Melendez JH, Wang NY, Price LB, Zenilman JM, Lazarus GS. 2009. Defining wound microbial flora: molecular microbiology opening new horizons. Arch. Dermatol. 145:1193-1195. http://dx.doi.org/10.1001/archdermatol. 2009.246.
    • (2009) Arch. Dermatol , vol.145 , pp. 1193-1195
    • Frankel, Y.M.1    Melendez, J.H.2    Wang, N.Y.3    Price, L.B.4    Zenilman, J.M.5    Lazarus, G.S.6
  • 15
    • 78649316993 scopus 로고    scopus 로고
    • A microbial detection array (MDA) for viral and bacterial detection
    • Gardner SN, Jaing CJ, McLoughlin KS, Slezak TR. 2010. A microbial detection array (MDA) for viral and bacterial detection. BMC Genomics 11:668. http://dx.doi.org/10.1186/1471-2164-11-668.
    • (2010) BMC Genomics , vol.11 , pp. 668
    • Gardner, S.N.1    Jaing, C.J.2    McLoughlin, K.S.3    Slezak, T.R.4
  • 18
    • 84883468661 scopus 로고    scopus 로고
    • Scalable metagenomic taxonomy classification using a reference genome database
    • Ames SK, Hysom DA, Gardner SN, Lloyd GS, Gokhale MB, Allen JE. 2013. Scalable metagenomic taxonomy classification using a reference genome database. Bioinformatics 29:2253-2260. http://dx.doi.org/10.1093/bioinformatics/btt389.
    • (2013) Bioinformatics , vol.29 , pp. 2253-2260
    • Ames, S.K.1    Hysom, D.A.2    Gardner, S.N.3    Lloyd, G.S.4    Gokhale, M.B.5    Allen, J.E.6
  • 19
    • 84876427223 scopus 로고    scopus 로고
    • Phyloseq: An R package for reproducible interactive analysis and graphics of microbiome census data
    • McMurdie PJ, Holmes S. 2013. Phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data. PLoS One 8:e61217. http://dx.doi.org/10.1371/journal.pone.0061217.
    • (2013) PLoS One , vol.8
    • McMurdie, P.J.1    Holmes, S.2
  • 21
    • 77949531040 scopus 로고    scopus 로고
    • NeatMap-non-clustering heat map alternatives in R
    • Rajaram S, Oono Y. 2010. NeatMap-non-clustering heat map alternatives in R. BMC Bioinformatics 11:45. http://dx.doi.org/10.1186/1471-2105-11-45.
    • (2010) BMC Bioinformatics , vol.11 , pp. 45
    • Rajaram, S.1    Oono, Y.2
  • 22
    • 84866292179 scopus 로고    scopus 로고
    • Scalable SNP analyses of 100-bacterial or viral genomes
    • Gardner SN, Slezak T. 2010. Scalable SNP analyses of 100- bacterial or viral genomes. J. Forensic Res. 1:107. http://dx.doi.org/10.4172/2157-7145. 1000107.
    • (2010) J. Forensic Res , vol.1 , pp. 107
    • Gardner, S.N.1    Slezak, T.2
  • 23
    • 84891935788 scopus 로고    scopus 로고
    • When whole-genome alignments just won't work: KSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds of microbial genomes
    • Gardner SN. 2013. When whole-genome alignments just won't work: kSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds of microbial genomes. PLoS One 8:e81760. http://dx.doi.org/10.1371/journal.pone. 0081760.
    • (2013) PLoS One , vol.8
    • Gardner, S.N.1
  • 25
    • 49149086653 scopus 로고    scopus 로고
    • Infectious disease complications of combat-related injuries
    • Murray CK. 2008. Infectious disease complications of combat-related injuries. Crit. Care Med. 36:S358-S364. http://dx.doi.org/10.1097/CCM. 0b013e31817e2ffc.
    • (2008) Crit. Care Med , vol.36
    • Murray, C.K.1
  • 28
    • 84869413334 scopus 로고    scopus 로고
    • Variants of the gentamicin and tobramycin resistance plasmid pRAY are widely distributed in Acinetobacter
    • Hamidian M, Nigro SJ, Hall RM. 2012. Variants of the gentamicin and tobramycin resistance plasmid pRAY are widely distributed in Acinetobacter. J. Antimicrob. Chemother. 67:2833-2836. http://dx.doi.org/10.1093/jac/dks318.
    • (2012) J. Antimicrob. Chemother , vol.67 , pp. 2833-2836
    • Hamidian, M.1    Nigro, S.J.2    Hall, R.M.3
  • 29
    • 84874444175 scopus 로고    scopus 로고
    • The neuropathic diabetic foot ulcer microbiome is associated with clinical factors
    • Gardner SE, Hillis SL, Heilmann K, Segre JA, Grice EA. 2013. The neuropathic diabetic foot ulcer microbiome is associated with clinical factors. Diabetes 62:923-930. http://dx.doi.org/10.2337/db12-0771.
    • (2013) Diabetes , vol.62 , pp. 923-930
    • Gardner, S.E.1    Hillis, S.L.2    Heilmann, K.3    Segre, J.A.4    Grice, E.A.5
  • 30
    • 42049111815 scopus 로고    scopus 로고
    • Survey of bacterial diversity in chronic wounds using pyrosequencing, DGGE, and full ribosome shotgun sequencing
    • Dowd SE, Sun Y, Secor PR, Rhoads DD, Wolcott BM, James GA, Wolcott RD. 2008. Survey of bacterial diversity in chronic wounds using pyrosequencing, DGGE, and full ribosome shotgun sequencing.BMCMicrobiol. 8:43. http://dx.doi.org/10.1186/1471-2180-8-43.
    • (2008) BMCMicrobiol , vol.8 , pp. 43
    • Dowd, S.E.1    Sun, Y.2    Secor, P.R.3    Rhoads, D.D.4    Wolcott, B.M.5    James, G.A.6    Wolcott, R.D.7
  • 35
    • 84856700592 scopus 로고    scopus 로고
    • Differences in Acinetobacter baumannii strains and host innate immune response determine morbidity and mortality in experimental pneumonia
    • de Breij A, Eveillard M, Dijkshoorn L, van den Broek PJ, Nibbering PH, Joly-Guillou ML. 2012. Differences in Acinetobacter baumannii strains and host innate immune response determine morbidity and mortality in experimental pneumonia. PLoS One 7:e30673. http://dx.doi.org/10.1371/journal.pone.0030673.
    • (2012) PLoS One , vol.7
    • De Breij, A.1    Eveillard, M.2    Dijkshoorn, L.3    Van Den Broek, P.J.4    Nibbering, P.H.5    Joly-Guillou, M.L.6
  • 37
  • 38
    • 67349285168 scopus 로고    scopus 로고
    • Invasive mycoses following trauma
    • Hajdu S, Obradovic A, Presterl E, Vecsei V. 2009. Invasive mycoses following trauma. Injury 40:548-554. http://dx.doi.org/10.1016/j.injury.2008.03. 034.
    • (2009) Injury , vol.40 , pp. 548-554
    • Hajdu, S.1    Obradovic, A.2    Presterl, E.3    Vecsei, V.4
  • 39
    • 84872076768 scopus 로고    scopus 로고
    • A genetic approach to the development of new therapeutic phages to fight Pseudomonas aeruginosa in wound infections
    • Krylov V, Shaburova O, Krylov S, Pleteneva E. 2013. A genetic approach to the development of new therapeutic phages to fight Pseudomonas aeruginosa in wound infections. Viruses 5:15-53. http://dx.doi.org/10.3390/v5010015.
    • (2013) Viruses , vol.5 , pp. 15-53
    • Krylov, V.1    Shaburova, O.2    Krylov, S.3    Pleteneva, E.4
  • 40
    • 85046980084 scopus 로고    scopus 로고
    • Novel therapies for treatment of multidrug resistant Acinetobacter baumannii skin infections
    • Mihu MR, Martinez LR. 2011. Novel therapies for treatment of multidrug resistant Acinetobacter baumannii skin infections. Virulence 2:97-102. http://dx.doi.org/10.4161/viru.2.2.15061.
    • (2011) Virulence , vol.2 , pp. 97-102
    • Mihu, M.R.1    Martinez, L.R.2
  • 41
    • 78651270133 scopus 로고    scopus 로고
    • Biomarkers to predict wound healing: The future of complex war wound management
    • Hahm G, Glaser JJ, Elster EA. 2011. Biomarkers to predict wound healing: the future of complex war wound management. Plast. Reconstr. Surg. 127(Suppl 1):21S-26S. http://dx.doi.org/10.1097/PRS.0b013e3181fbe291.
    • (2011) Plast. Reconstr. Surg , vol.127 , Issue.SUPPL. 1
    • Hahm, G.1    Glaser, J.J.2    Elster, E.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.