Modeling positive Granger causality and negative phase lag between cortical areas

NeuroImage

Volumn 99, Issue , 2014, Pages 411-418

  Matias, Fernanda S ^a,b   Gollo, Leonardo L ^c   Carelli, Pedro V ^a   Bressler, Steven L ^d   Copelli, Mauro ^a   Mirasso, Claudio R ^b  

^a FEDERAL UNIVERSITY OF PERNAMBUCO   (Brazil)

^b CSIC   (Spain)

^c QIMR BERGHOFER MEDICAL RESEARCH INSTITUTE   (Australia)

^d FLORIDA ATLANTIC UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTICIPATED SYNCHRONIZATION; ARTICLE; BRAIN FUNCTION; COHERENCE; CONNECTOME; CORTICAL SYNCHRONIZATION; GRANGER CAUSALITY; HAPLORHINI; NERVOUS SYSTEM POTENTIAL; NONHUMAN; PRIORITY JOURNAL; SENSORY FEEDBACK; SIGNAL PROCESSING; STATISTICAL PARAMETERS; THEORETICAL MODEL; TIME; TIME DELAY; ALGORITHM; ANIMAL; BIOLOGICAL MODEL; BRAIN CORTEX; ELECTROENCEPHALOGRAPHY PHASE SYNCHRONIZATION; EPIDEMIOLOGY; MEMBRANE POTENTIAL; NERVE TRACT; PHYSIOLOGY; PSYCHOMOTOR PERFORMANCE;

ALGORITHMS; ANIMALS; CAUSALITY; CEREBRAL CORTEX; ELECTROENCEPHALOGRAPHY PHASE SYNCHRONIZATION; HAPLORHINI; MEMBRANE POTENTIALS; MODELS, NEUROLOGICAL; NEURAL PATHWAYS; PSYCHOMOTOR PERFORMANCE;

EID: 84903647613     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2014.05.063     Document Type: Article

References (62)

1. Akaike H. A new look at the statistical model identification. IEEE Trans. Autom. Control 1974, 19:716-717.
2. Alonso A., García-Austt E. Neuronal sources of theta rhythm in the entorhinal cortex of the rat. ii. Phase relations between unit discharges and theta field potentials. Rev. Mod. Phys. 1987, 67:502-509.
3. Anderson E.B., Mitchell J.F., Reynolds J.H. Attention-dependent reductions in burstiness and action-potential height in macaque area v4. Nat. Neurosci. 2013, 16:1125-1131.
4. Baccalá L.A., Sameshima K. Partial directed coherence: a new concept in neural structure determination. Biol. Cybern. 2001, 84:463-474.
5. Banerjee S., Snyder A.C., Molholm S., Foxe J.J. Oscillatory alpha-band mechanisms and the deployment of spatial attention to anticipated auditory and visual target locations: supramodal or sensory-specific control mechanisms?. J. Neurosci. 2011, 31:9923-9932.
6. Battaglia D., Witt A., Wolf F., Geisel T. Dynamic effective connectivity of inter-areal brain circuits. PLoS Comput. Biol. 2012, 8:e1002438.
7. Bi G.Q., Poo M.M. Synaptic modifications in cultured hippocampal neurons: dependence on spike timing, synaptic strength, and postsynaptic cell type. J. Neurosci. 1998, 18:10464-10472.
8. Bressler S., Kelso J. Cortical coordination dynamics and cognition. Trends Cogn. Sci. 2001, 5:26-36.
9. Bressler S.L., Menon V. Large-scale brain networks in cognition: emerging methods and principles. Trends Cogn. Sci. 2010, 14:277-290.
10. Bressler S.L., Seth A.K. Wiener-Granger causality: a well established methodology. NeuroImage 2011, 58:323-329.
11. Brette R. Computing with neural synchrony. PLoS Comput. Biol. 2012, 8:e1002561.
12. Brovelli A., Ding M., Ledberg A., Chen Y., Nakamura R., Bressler S.L. Beta oscillations in a large-scale sensorimotor cortical network: directional influences revealed by Granger causality. Proc. Natl. Acad. Sci. U. S. A. 2004, 101:9849-9854.
13. Che Y., Li R., Han C., Cui S., Wang J., Wei X., Deng B. Topology identification of uncertain nonlinearly coupled complex networks with delays based on anticipatory synchronization. Chaos 2013, 23:013127.
14. Chrobak J.J., Buzsáki G. Gamma oscillations in the entorhinal cortex of the freely behaving rat. J. Neurosci. 1998, 18:388-398.
15. Ciszak M., Calvo O., Masoller C., Mirasso C.R., Toral R. Anticipating the response of excitable systems driven by random forcing. Phys. Rev. Lett. 2003, 90:204102.
16. Ciszak M., Marino F., Toral R., Balle S. Dynamical mechanism of anticipating synchronization in excitable systems. Phys. Rev. Lett. 2004, 93:114102.
17. Ciszak M., Mirasso C.R., Toral R., Calvo O. Predict-prevent control method for perturbed excitable systems. Phys. Rev. E. 2009, 79:046203.
18. Feenstra B., Holsheimer J. Dipole-like neuronal sources of theta rhythm in dorsal hippocampus, dentate gyrus and cingulate cortex of the urethane-anesthetized rat. Electroencephalogr. Clin. Neurophysiol. 1979, 47:532-538.
19. Fell J., Axmacher N. The role of phase synchronization in memory processes. Nat. Rev. Neurosci. 2011, 12:105-118.
20. Fries P. A mechanism for cognitive dynamics: neuronal communication through neuronal coherence. Trends Cogn. Sci. 2005, 9:474-480.
21. Gollo L.L., Mirasso C.R., Atienza M., Crespo-Garcia M., Cantero J.L. Theta band zero-lag long-range cortical synchronization via hippocampal dynamical relaying. PLoS ONE 2011, 6:e17756.
22. Granger C.W.J. Investigating causal relations by econometric models and cross-spectral methods. Econometrica 1969, 37:424-438.
23. Gregoriou G.G., Gotts S.J., Zhou H., R.D High-frequency, long range coupling between prefrontal and visual cortex during attention. Science 2009, 324:1207-1210.
24. He F., Billings S.A., Wei H.L., Sarrigiannis P.G. A nonlinear causality measure in the frequency domain: nonlinear partial directed coherence with applications to EEG. J. Neurosci. Methods 2014, 225:71-80.
25. Izhikevich E. Simple model of spiking neurons. IEEE Trans. Neural Netw. 2003, 14:1569.
26. Izhikevich E.M. Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting 2006, MIT Press, Cambridge.
27. Izhikevich E., Gally J., Edelman G. Spike-timing dynamics of neuronal groups. Cereb. Cortex 2004, 14:933-944.
28. Kostur M., Hänggi P., Talkner P., Mateos J.L. Anticipated synchronization in coupled inertial ratchets with time-delayed feedback: a numerical study. Phys. Rev. E. 2005, 72:036210.
29. Lobier M., Siebenhühner F., Palva S., Palva J.M. Phase transfer entropy: a novel phase-based measure for directed connectivity in networks coupled by oscillatory interactions. NeuroImage 2014, 85. (Part 2:853 - 872 New Horizons for Neural Oscillation).
30. Lütkepohl H. Introduction to Multiple Time Series Analysis 1993, Springer, Berlin.
31. Marinazzo D., Pellicoro M., Stramaglia S. Kernel method for nonlinear Granger causality. Phys. Rev. Lett. 2008, 100:144103.
32. Marinazzo D., Liao W., Chen H., Stramaglia S. Nonlinear connectivity by Granger causality. NeuroImage 2011, 58:330-338.
33. Markov N., Kennedy H. The importance of being hierarchical. Curr. Opin. Neurobiol. 2013, 23:187-294.
34. Markram H., Gerstner W., Sjöström P.J. A history of spike-timing-dependent plasticity. Front. Synaptic Neurosci. 2011, 3:1-24.
35. Marsden J.F., Limousin-Dowsey P., Ashby P., Pollak P., Brown P. Subthalamic nucleus, sensorimotor cortex and muscle interrelationships in Parkinson's disease. Brain 2001, 124:378-388.
36. Masoller C., Zanette D.H. Anticipated synchronization in coupled chaotic maps with delays. Phys. A 2001, 300:359-366.
37. Matias F.S., Carelli P.V., Mirasso C.R., Copelli M. Anticipated synchronization in a biologically plausible model of neuronal motifs. Phys. Rev. E. 2011, 84:021922.
38. Niso G., Bruña R., Pereda E., Gutiérrez R., Bajo R., Maestú F., del-Pozo F. HERMES: towards an integrated toolbox to characterize functional and effective brain connectivity. Neuroinformatics 2013, 11:405-434.
39. Pereda E., Quiroga R.Q., Bhattacharya J. Nonlinear multivariate analysis of neurophysiological signals. Prog. Neurobiol. 2005, 77:1-37.
40. Pikovsky A., Rosenblum M., Kurths J. Synchronization: A Universal Concept in Nonlinear Sciences 2001, Cambridge University Press, Cambridge, UK.
41. Pyragas K., Pyragiené T. Coupling design for a long-term anticipating synchronization of chaos. Phys. Rev. E. 2008, 78:046217.
42. Pyragiené T., Pyragas K. Anticipating spike synchronization in nonidentical chaotic neurons. Nonlinear Dyn. 2013, 1-10.
43. Salazar R.F., Dotson N.M., Bressler S.L., Gray C.M. Content-specific fronto-parietal synchronization during visual working memory. Science 2012, 338:1097-1100.
44. Sauseng P., Klimesch W. What does phase information of oscillatory brain activity tell us about cognitive processes?. Neurosci. Biobehav. Rev. 2008, 32:1001-1013.
45. Schnitzler A., Gross J. Normal and pathological oscillatory communication in the brain. Nat. Rev. Neurosci. 2005, 6:285-296.
46. Seth A. A matlab toolbox for granger causal connectivity analysis. J. Neurosci. Methods 2010, 186:262-273.
47. Sharott A., Peter J., Magill P.J., Bolam J.P., Brown P. Directional analysis of coherent oscillatory field potentials in the cerebral cortex and basal ganglia of the rat. J. Physiol. 2005, 562:951-963.
48. Siegel M., Donner T.H., Engel A.K. Spectral fingerprints of large-scale neuronal interactions. Nat. Rev. Neurosci. 2012, 13:121-134.
49. Singer W. Neuronal synchrony: a versatile code for the definition of relations?. Neuron Rev. 1999, 24:49-65.
50. Sivaprakasam S., Shahverdiev E.M., Spencer P.S., Shore K.A. Experimental demonstration of anticipating synchronization in chaotic semiconductor lasers with optical feedback. Phys. Rev. Lett. 2001, 87:154101.
51. Stephen D.G., Dixon J.A. Coordinate-independent mapping of structural and functional data by objective relational transformation (ORT). Chaos, Solitons Fractals 2011, 44:160-168.
52. Stepp N., Turvey M.T. On strong anticipation. Cogn. Syst. Res. 2010, 11:148-164.
53. Tang S., Liu J.M. Experimental verification of anticipated and retarded synchronization in chaotic semiconductor lasers. Phys. Rev. Lett. 2003, 90:194101.
54. Tass P., Kurths J., Rosenblum M.G., Guasti G., Hefter H. Delay-induced transitions in visually guided movements. Phys. Rev. E. 1996, 54:R2224-R2227.
55. Uhlhaas P.J., Pipa G., Lima B., Melloni L., Neuenschwander S., Nikolić D., Singer W. Neural synchrony in cortical networks: history, concept and current status. Front. Integr. Neurosci. 2009, 3:17.
56. Varela F., Lachaux J.P., Rodriguez E., Martinerie J. The brainweb: phase synchronization and large-scale integration. Nat. Rev. Neurosci. 2001, 2:229-239.
57. Vicente R., Wibral M., Lindner M., Pipa G. Transfer entropy-a model-free measure of effective connectivity for the neurosciences. J. Comput. Neurosci. 2011, 30:45-67.
58. Voss H.U. Anticipating chaotic synchronization. Phys. Rev. E. 2000, 61:5115.
59. Voss H.U. Dynamic long-term anticipation of chaotic states. Phys. Rev. Lett. 2001, 87:014102.
60. Voss H.U. Erratum: anticipating chaotic synchronization [phys. rev. e 61, 5115 (2000)]. Phys. Rev. E. 2001, 64:039904.
61. Wang X.J. Neurophysiological and computational principles of cortical rhythms in cognition. Physiol. Rev. 2010, 90:1195-1268.
62. Williams D., Tijssen M., van Bruggen G., Bosch A., Insola A., Lazzaro V.D., Mazzone P., Oliviero A., Quartarone A., Speelman H., Brown P. Dopamine-dependent changes in the functional connectivity between basal ganglia and cerebral cortex in humans. Brain 2002, 125:1558-1569.