-
3
-
-
33845782385
-
2+ indicators: Using genetics and molecular design to understand complex physiology
-
2+ indicators: using genetics and molecular design to understand complex physiology J. Physiol. 2007 578 55 67
-
(2007)
J. Physiol.
, vol.578
, pp. 55-67
-
-
Kotlikoff, M.I.1
-
4
-
-
84883390990
-
Fast GCaMPs for improved tracking of neuronal activity
-
X. R. Sun A. Badura D. A. Pacheco L. A. Lynch E. R. Schneider M. P. Taylor I. B. Hogue L. W. Enquist M. Murthy S. S. H. Wang Fast GCaMPs for improved tracking of neuronal activity Nat. Commun. 2013 4 2170
-
(2013)
Nat. Commun.
, vol.4
, pp. 2170
-
-
Sun, X.R.1
Badura, A.2
Pacheco, D.A.3
Lynch, L.A.4
Schneider, E.R.5
Taylor, M.P.6
Hogue, I.B.7
Enquist, L.W.8
Murthy, M.9
Wang, S.S.H.10
-
5
-
-
84880427381
-
Ultrasensitive fluorescent proteins for imaging neuronal activity
-
T.-W. Chen T. J. Wardill Y. Sun S. R. Pulver S. L. Renninger A. Baohan E. R. Schreiter R. A. Kerr M. B. Orger V. Jayaraman L. L. Looger K. Svoboda D. S. Kim Ultrasensitive fluorescent proteins for imaging neuronal activity Nature 2013 499 295 300
-
(2013)
Nature
, vol.499
, pp. 295-300
-
-
Chen, T.-W.1
Wardill, T.J.2
Sun, Y.3
Pulver, S.R.4
Renninger, S.L.5
Baohan, A.6
Schreiter, E.R.7
Kerr, R.A.8
Orger, M.B.9
Jayaraman, V.10
Looger, L.L.11
Svoboda, K.12
Kim, D.S.13
-
6
-
-
84874152926
-
2+ Indicators and Photophysical Considerations for Optogenetic Applications
-
2+ Indicators and Photophysical Considerations for Optogenetic Applications ACS Chem. Neurosci. 2013 4 963 972
-
(2013)
ACS Chem. Neurosci.
, vol.4
, pp. 963-972
-
-
Wu, J.1
Liu, L.2
Matsuda, T.3
Zhao, Y.4
Rebane, A.5
Drobizhev, M.6
Chang, Y.-F.7
Araki, S.8
Arai, Y.9
March, K.10
Hughes, T.E.11
-
8
-
-
80053371503
-
2+ Indicators
-
2+ Indicators Science 2011 333 1888 1891
-
(2011)
Science
, vol.333
, pp. 1888-1891
-
-
Zhao, Y.1
Araki, S.2
Wu, J.3
Teramoto, T.4
Chang, Y.-F.5
Nakano, M.6
Abdelfattah, A.S.7
Fujiwara, M.8
Ishihara, T.9
Nagai, T.10
Campbell, R.E.11
-
9
-
-
84867026349
-
Optimization of a GCaMP Calcium Indicator for Neural Activity Imaging
-
J. Akerboom T.-W. Chen T. J. Wardill L. Tian J. S. Marvin S. Mutlu N. C. Calderón F. Esposti B. G. Borghuis X. R. Sun A. Gordus M. B. Orger R. Portugues F. Engert J. J. Macklin A. Filosa A. Aggarwal R. A. Kerr R. Takagi S. Kracun E. Shigetomi B. S. Khakh H. Baier L. Lagnado S. S.-H. Wang C. I. Bargmann B. E. Kimmel V. Jayaraman K. Svoboda D. S. Kim E. R. Schreiter L. L. Looger Optimization of a GCaMP Calcium Indicator for Neural Activity Imaging J. Neurosci. 2012 32 13819 13840
-
(2012)
J. Neurosci.
, vol.32
, pp. 13819-13840
-
-
Akerboom, J.1
Chen, T.-W.2
Wardill, T.J.3
Tian, L.4
Marvin, J.S.5
Mutlu, S.6
Calderón, N.C.7
Esposti, F.8
Borghuis, B.G.9
Sun, X.R.10
Gordus, A.11
Orger, M.B.12
Portugues, R.13
Engert, F.14
Macklin, J.J.15
Filosa, A.16
Aggarwal, A.17
Kerr, R.A.18
Takagi, R.19
Kracun, S.20
Shigetomi, E.21
Khakh, B.S.22
Baier, H.23
Lagnado, L.24
Wang, S.S.-H.25
Bargmann, C.I.26
Kimmel, B.E.27
Jayaraman, V.28
Svoboda, K.29
Kim, D.S.30
Schreiter, E.R.31
Looger, L.L.32
more..
-
10
-
-
73349108496
-
Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators
-
L. Tian S. A. Hires T. Mao D. Huber M. E. Chiappe S. H. Chalasani L. Petreanu J. Akerboom S. A. McKinney E. R. Schreiter C. I. Bargmann V. Jayaraman K. Svoboda L. L. Looger Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators Nat. Methods 2009 6 875 881
-
(2009)
Nat. Methods
, vol.6
, pp. 875-881
-
-
Tian, L.1
Hires, S.A.2
Mao, T.3
Huber, D.4
Chiappe, M.E.5
Chalasani, S.H.6
Petreanu, L.7
Akerboom, J.8
McKinney, S.A.9
Schreiter, E.R.10
Bargmann, C.I.11
Jayaraman, V.12
Svoboda, K.13
Looger, L.L.14
-
11
-
-
77956340960
-
2+ indicators, yellow Cameleon-Nano
-
2+ indicators, yellow Cameleon-Nano Nat. Methods 2010 7 729 732
-
(2010)
Nat. Methods
, vol.7
, pp. 729-732
-
-
Horikawa, K.1
Yamada, Y.2
Matsuda, T.3
Kobayashi, K.4
Hashimoto, M.5
Matsu-Ura, T.6
Miyawaki, A.7
Michikawa, T.8
Mikoshiba, K.9
Nagai, T.10
-
12
-
-
0029973636
-
FACS-optimized mutants of the green fluorescent protein (GFP)
-
B. P. Cormack R. H. Valdivia S. Falkow FACS-optimized mutants of the green fluorescent protein (GFP) Gene 1996 173 33 38
-
(1996)
Gene
, vol.173
, pp. 33-38
-
-
Cormack, B.P.1
Valdivia, R.H.2
Falkow, S.3
-
13
-
-
21444436724
-
Evolutionary optimization of fluorescent proteins for intracellular FRET
-
A. W. Nguyen P. S. Daugherty Evolutionary optimization of fluorescent proteins for intracellular FRET Nat. Biotechnol. 2005 23 355 360
-
(2005)
Nat. Biotechnol.
, vol.23
, pp. 355-360
-
-
Nguyen, A.W.1
Daugherty, P.S.2
-
15
-
-
43149111583
-
Droplet-Based Microfluidic Platforms for the Encapsulation and Screening of Mammalian Cells and Multicellular Organisms
-
J. Clausell-Tormos D. Lieber J.-C. Baret A. El-Harrak O. J. Miller L. Frenz J. Blouwolff K. J. Humphry S. Köster H. Duan C. Holtze D. A. Weitz A. D. Griffiths C. A. Merten Droplet-Based Microfluidic Platforms for the Encapsulation and Screening of Mammalian Cells and Multicellular Organisms Chem. Biol. 2008 15 427 437
-
(2008)
Chem. Biol.
, vol.15
, pp. 427-437
-
-
Clausell-Tormos, J.1
Lieber, D.2
Baret, J.-C.3
El-Harrak, A.4
Miller, O.J.5
Frenz, L.6
Blouwolff, J.7
Humphry, K.J.8
Köster, S.9
Duan, H.10
Holtze, C.11
Weitz, D.A.12
Griffiths, A.D.13
Merten, C.A.14
-
16
-
-
84884573157
-
-
ed. F. D. Edward, Academic Press, 531
-
M. F. Haroon, C. T. Skennerton, J. A. Steen, N. Lachner, P. Hugenholtz and G. W. Tyson, in Methods Enzymol., ed., F. D. Edward, Academic Press, 2013, vol. 531, pp. 3-19
-
(2013)
Methods Enzymol.
, pp. 3-19
-
-
Haroon, M.F.1
Skennerton, C.T.2
Steen, J.A.3
Lachner, N.4
Hugenholtz, P.5
Tyson, G.W.6
-
19
-
-
0242385629
-
An Integrated Microfluidic System for Reaction, High-Sensitivity Detection, and Sorting of Fluorescent Cells and Particles
-
P. S. Dittrich P. Schwille An Integrated Microfluidic System for Reaction, High-Sensitivity Detection, and Sorting of Fluorescent Cells and Particles Anal. Chem. 2003 75 5767 5774
-
(2003)
Anal. Chem.
, vol.75
, pp. 5767-5774
-
-
Dittrich, P.S.1
Schwille, P.2
-
21
-
-
84878079325
-
Microfluidic cell sorter for use in developing red fluorescent proteins with improved photostability
-
L. M. Davis J. L. Lubbeck K. M. Dean A. E. Palmer R. Jimenez Microfluidic cell sorter for use in developing red fluorescent proteins with improved photostability Lab Chip 2013 13 2320 2327
-
(2013)
Lab Chip
, vol.13
, pp. 2320-2327
-
-
Davis, L.M.1
Lubbeck, J.L.2
Dean, K.M.3
Palmer, A.E.4
Jimenez, R.5
-
23
-
-
77749270677
-
Ultrahigh-throughput screening in drop-based microfluidics for directed evolution
-
J. J. Agresti E. Antipov A. R. Abate K. Ahn A. C. Rowat J.-C. Baret M. Marquez A. M. Klibanov A. D. Griffiths D. A. Weitz Ultrahigh-throughput screening in drop-based microfluidics for directed evolution Proc. Natl. Acad. Sci. U. S. A. 2010 107 4004 4009
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 4004-4009
-
-
Agresti, J.J.1
Antipov, E.2
Abate, A.R.3
Ahn, K.4
Rowat, A.C.5
Baret, J.-C.6
Marquez, M.7
Klibanov, A.M.8
Griffiths, A.D.9
Weitz, D.A.10
-
24
-
-
77955457208
-
Microfluidic compartmentalized directed evolution
-
B. M. Paegel G. F. Joyce Microfluidic compartmentalized directed evolution Chem. Biol. 2010 17 717 724
-
(2010)
Chem. Biol.
, vol.17
, pp. 717-724
-
-
Paegel, B.M.1
Joyce, G.F.2
-
25
-
-
84862833267
-
Specific Sorting of Single Bacterial Cells with Microfabricated Fluorescence-Activated Cell Sorting and Tyramide Signal Amplification Fluorescence in Situ Hybridization
-
C. H. Chen S. H. Cho H.-I. Chiang F. Tsai K. Zhang Y.-H. Lo Specific Sorting of Single Bacterial Cells with Microfabricated Fluorescence-Activated Cell Sorting and Tyramide Signal Amplification Fluorescence in Situ Hybridization Anal. Chem. 2011 83 7269 7275
-
(2011)
Anal. Chem.
, vol.83
, pp. 7269-7275
-
-
Chen, C.H.1
Cho, S.H.2
Chiang, H.-I.3
Tsai, F.4
Zhang, K.5
Lo, Y.-H.6
-
26
-
-
84886799054
-
An Engineered Monomeric Zoanthus sp. Yellow Fluorescent Protein
-
H. Hoi E. S. Howe Y. Ding W. Zhang M. A. Baird B. R. Sell J. R. Allen M. W. Davidson R. E. Campbell An Engineered Monomeric Zoanthus sp. Yellow Fluorescent Protein Chem. Biol. 2013 20 1296 1304
-
(2013)
Chem. Biol.
, vol.20
, pp. 1296-1304
-
-
Hoi, H.1
Howe, E.S.2
Ding, Y.3
Zhang, W.4
Baird, M.A.5
Sell, B.R.6
Allen, J.R.7
Davidson, M.W.8
Campbell, R.E.9
-
27
-
-
1242328938
-
Electrokinetically driven micro flow cytometers with integrated fiber optics for on-line cell/particle detection
-
L.-M. Fu R.-J. Yang C.-H. Lin Y.-J. Pan G.-B. Lee Electrokinetically driven micro flow cytometers with integrated fiber optics for on-line cell/particle detection Anal. Chim. Acta 2004 507 163 169
-
(2004)
Anal. Chim. Acta
, vol.507
, pp. 163-169
-
-
Fu, L.-M.1
Yang, R.-J.2
Lin, C.-H.3
Pan, Y.-J.4
Lee, G.-B.5
-
28
-
-
3042856485
-
Insulator-based dielectrophoresis for the selective concentration and separation of live bacteria in water
-
B. H. Lapizco-Encinas B. A. Simmons E. B. Cummings Y. Fintschenko Insulator-based dielectrophoresis for the selective concentration and separation of live bacteria in water Electrophoresis 2004 25 1695 1704
-
(2004)
Electrophoresis
, vol.25
, pp. 1695-1704
-
-
Lapizco-Encinas, B.H.1
Simmons, B.A.2
Cummings, E.B.3
Fintschenko, Y.4
-
32
-
-
1242346127
-
Integrating advanced functionality in a microfabricated high-throughput fluorescent-activated cell sorter
-
A. Wolff I. R. Perch-Nielsen U. D. Larsen P. Friis G. Goranovic C. R. Poulsen J. P. Kutter P. Telleman Integrating advanced functionality in a microfabricated high-throughput fluorescent-activated cell sorter Lab Chip 2003 3 22 27
-
(2003)
Lab Chip
, vol.3
, pp. 22-27
-
-
Wolff, A.1
Perch-Nielsen, I.R.2
Larsen, U.D.3
Friis, P.4
Goranovic, G.5
Poulsen, C.R.6
Kutter, J.P.7
Telleman, P.8
-
33
-
-
0035129282
-
2+ probe composed of a single green fluorescent protein
-
2+ probe composed of a single green fluorescent protein Nat. Biotechnol. 2001 19 137 141
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 137-141
-
-
Nakai, J.1
Ohkura, M.2
Imoto, K.3
-
35
-
-
84874185263
-
Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics
-
J. Akerboom N. Carreras Calderón L. Tian S. Wabnig M. Prigge J. Tolö A. Gordus M. B. Orger K. E. Severi J. J. Macklin R. Patel S. R. Pulver T. J. Wardill E. Fischer C. Schüler T.-W. Chen K. S. Sarkisyan J. S. Marvin C. I. Bargmann D. S. Kim S. Kügler L. Lagnado P. Hegemann A. Gottschalk E. R. Schreiter L. L. Looger Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics Front. Mol. Neurosci. 2013 6 2
-
(2013)
Front. Mol. Neurosci.
, vol.6
, pp. 2
-
-
Akerboom, J.1
Carreras Calderón, N.2
Tian, L.3
Wabnig, S.4
Prigge, M.5
Tolö, J.6
Gordus, A.7
Orger, M.B.8
Severi, K.E.9
Macklin, J.J.10
Patel, R.11
Pulver, S.R.12
Wardill, T.J.13
Fischer, E.14
Schüler, C.15
Chen, T.-W.16
Sarkisyan, K.S.17
Marvin, J.S.18
Bargmann, C.I.19
Kim, D.S.20
Kügler, S.21
Lagnado, L.22
Hegemann, P.23
Gottschalk, A.24
Schreiter, E.R.25
Looger, L.L.26
more..
-
36
-
-
77953099930
-
Human mammalian cell sorting using a highly integrated micro-fabricated fluorescence-activated cell sorter (mFACS)
-
S. H. Cho C. H. Chen F. S. Tsai J. M. Godin Y.-H. Lo Human mammalian cell sorting using a highly integrated micro-fabricated fluorescence-activated cell sorter (mFACS) Lab Chip 2010 10 1567 1573
-
(2010)
Lab Chip
, vol.10
, pp. 1567-1573
-
-
Cho, S.H.1
Chen, C.H.2
Tsai, F.S.3
Godin, J.M.4
Lo, Y.-H.5
-
37
-
-
84860442533
-
Microfluidic flow cytometer for quantifying photobleaching of fluorescent proteins in cells
-
J. L. Lubbeck K. M. Dean H. Ma A. E. Palmer R. Jimenez Microfluidic flow cytometer for quantifying photobleaching of fluorescent proteins in cells Anal. Chem. 2012 84 3929 3937
-
(2012)
Anal. Chem.
, vol.84
, pp. 3929-3937
-
-
Lubbeck, J.L.1
Dean, K.M.2
Ma, H.3
Palmer, A.E.4
Jimenez, R.5
-
38
-
-
11844260011
-
ZFP538, a Yellow-Fluorescent Protein from Zoanthus, Contains a Novel Three-Ring Chromophore
-
S. J. Remington R. M. Wachter D. K. Yarbrough B. Branchaud D. C. Anderson K. Kallio K. A. Lukyanov zFP538, a Yellow-Fluorescent Protein from Zoanthus, Contains a Novel Three-Ring Chromophore Biochemistry 2004 44 202 212
-
(2004)
Biochemistry
, vol.44
, pp. 202-212
-
-
Remington, S.J.1
Wachter, R.M.2
Yarbrough, D.K.3
Branchaud, B.4
Anderson, D.C.5
Kallio, K.6
Lukyanov, K.A.7
-
39
-
-
0029757121
-
Ultra-fast excited state dynamics in green fluorescent protein: Multiple states and proton transfer
-
M. Chattoraj B. A. King G. U. Bublitz S. G. Boxer Ultra-fast excited state dynamics in green fluorescent protein: multiple states and proton transfer Proc. Natl. Acad. Sci. U. S. A. 1996 93 8362 8367
-
(1996)
Proc. Natl. Acad. Sci. U. S. A.
, vol.93
, pp. 8362-8367
-
-
Chattoraj, M.1
King, B.A.2
Bublitz, G.U.3
Boxer, S.G.4
-
40
-
-
48049095959
-
Fluorescence imaging using a fluorescent protein with a large Stokes shift
-
T. Kogure H. Kawano Y. Abe A. Miyawaki Fluorescence imaging using a fluorescent protein with a large Stokes shift Methods 2008 45 223 226
-
(2008)
Methods
, vol.45
, pp. 223-226
-
-
Kogure, T.1
Kawano, H.2
Abe, Y.3
Miyawaki, A.4
-
41
-
-
52049092533
-
Calcium Signaling in Dendrites and Spines: Practical and Functional Considerations
-
M. J. Higley B. L. Sabatini Calcium Signaling in Dendrites and Spines: Practical and Functional Considerations Neuron 2008 59 902 913
-
(2008)
Neuron
, vol.59
, pp. 902-913
-
-
Higley, M.J.1
Sabatini, B.L.2
-
42
-
-
0029065159
-
Dendritic spines as basic functional units of neuronal integration
-
R. Yuste W. Denk Dendritic spines as basic functional units of neuronal integration Nature 1995 375 682 684
-
(1995)
Nature
, vol.375
, pp. 682-684
-
-
Yuste, R.1
Denk, W.2
-
43
-
-
34347230164
-
Measuring calcium signaling using genetically targetable fluorescent indicators
-
A. E. Palmer R. Y. Tsien Measuring calcium signaling using genetically targetable fluorescent indicators Nat. Protoc. 2006 1 1057 1065
-
(2006)
Nat. Protoc.
, vol.1
, pp. 1057-1065
-
-
Palmer, A.E.1
Tsien, R.Y.2
-
45
-
-
84858054760
-
Imaging Calcium in Neurons
-
C. Grienberger A. Konnerth Imaging Calcium in Neurons Neuron 2012 73 862 885
-
(2012)
Neuron
, vol.73
, pp. 862-885
-
-
Grienberger, C.1
Konnerth, A.2
-
46
-
-
0032846609
-
Detecting Action Potentials in Neuronal Populations with Calcium Imaging
-
D. Smetters A. Majewska R. Yuste Detecting Action Potentials in Neuronal Populations with Calcium Imaging Methods 1999 18 215 221
-
(1999)
Methods
, vol.18
, pp. 215-221
-
-
Smetters, D.1
Majewska, A.2
Yuste, R.3
-
47
-
-
0029787731
-
Modulation of excitatory synaptic transmission by adenosine released from single hippocampal pyramidal neurons
-
J. M. Brundege T. V. Dunwiddie Modulation of excitatory synaptic transmission by adenosine released from single hippocampal pyramidal neurons J. Neurosci. 1996 16 5603 5612
-
(1996)
J. Neurosci.
, vol.16
, pp. 5603-5612
-
-
Brundege, J.M.1
Dunwiddie, T.V.2
-
48
-
-
84887391928
-
Methylxanthines do not affect rhythmogenic preBötC inspiratory network activity but impair bursting of preBötC-driven motoneurons
-
B. Panaitescu J. Kuribayashi A. Ruangkittisakul V. Leung M. Iizuka K. Ballanyi Methylxanthines do not affect rhythmogenic preBötC inspiratory network activity but impair bursting of preBötC-driven motoneurons Neuroscience 2013 255 158 176
-
(2013)
Neuroscience
, vol.255
, pp. 158-176
-
-
Panaitescu, B.1
Kuribayashi, J.2
Ruangkittisakul, A.3
Leung, V.4
Iizuka, M.5
Ballanyi, K.6
-
50
-
-
0342657277
-
Adenosine Receptor Antagonists Induce Persistent Bursting in the Rat Hippocampal CA3 Region Via an NMDA Receptor-Dependent Mechanism
-
S. Thümmler T. V. Dunwiddie Adenosine Receptor Antagonists Induce Persistent Bursting in the Rat Hippocampal CA3 Region Via an NMDA Receptor-Dependent Mechanism J. Neurophysiol. 2000 83 1787 1795
-
(2000)
J. Neurophysiol.
, vol.83
, pp. 1787-1795
-
-
Thümmler, S.1
Dunwiddie, T.V.2
-
53
-
-
84883651986
-
Circular permutated red fluorescent proteins and calcium ion indicators based on mCherry
-
H. J. Carlson R. E. Campbell Circular permutated red fluorescent proteins and calcium ion indicators based on mCherry Protein Eng., Des. Sel. 2013 26 763 772
-
(2013)
Protein Eng., Des. Sel.
, vol.26
, pp. 763-772
-
-
Carlson, H.J.1
Campbell, R.E.2
-
54
-
-
84867488425
-
-
ed. K. Ballanyi, Humana Press
-
C. Kantor, B. Panaitescu, J. Kuribayashi, A. Ruangkittisakul, I. Jovanovic, V. Leung, T.-F. Lee, D. MacTavish, J. H. Jhamandas, P.-Y. Cheung and K. Ballanyi, in Isolated Central Nervous System Circuits, ed., K. Ballanyi, Humana Press, 2012, pp. 315-356
-
(2012)
Isolated Central Nervous System Circuits
, pp. 315-356
-
-
Kantor, C.1
Panaitescu, B.2
Kuribayashi, J.3
Ruangkittisakul, A.4
Jovanovic, I.5
Leung, V.6
Lee, T.-F.7
Mactavish, D.8
Jhamandas, J.H.9
Cheung, P.-Y.10
Ballanyi, K.11
|