메뉴 건너뛰기




Volumn 42, Issue 10, 2014, Pages 6232-6242

The forkhead transcription factor FOXK2 acts as a chromatin targeting factor for the BAP1-containing histone deubiquitinase complex

Author keywords

[No Author keywords available]

Indexed keywords

DEUBIQUITINASE; DNA; HISTONE; PROTEIN BAP 1; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR FOXK2; TRANSCRIPTION FACTOR SIN3A; TUMOR SUPPRESSOR PROTEIN; UNCLASSIFIED DRUG;

EID: 84903171180     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gku274     Document Type: Article
Times cited : (66)

References (42)
  • 1
    • 0036387193 scopus 로고    scopus 로고
    • Forkhead transcription factors: Key players in development and metabolism
    • Carlsson, P. and Mahlapuu, M. (2002) Forkhead transcription factors: key players in development and metabolism. Dev. Biol., 250, 1-23.
    • (2002) Dev. Biol. , vol.250 , pp. 1-23
    • Carlsson, P.1    Mahlapuu, M.2
  • 2
    • 62549108593 scopus 로고    scopus 로고
    • The evolution of Fox genes and their role in development and disease
    • Hannenhalli, S. and Kaestner, K.H. (2009) The evolution of Fox genes and their role in development and disease. Nat. Rev. Genet., 10, 233-240.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 233-240
    • Hannenhalli, S.1    Kaestner, K.H.2
  • 3
    • 0028046675 scopus 로고
    • Cloning and characterization of seven human forkhead proteins: Binding site specificity and DNA bending
    • Pierrou, S., Hellqvist, M., Samuelsson, L., Enerbäck, S. and Carlsson, P. (1994) Cloning and characterization of seven human forkhead proteins: binding site specificity and DNA bending. EMBO J., 13, 5002-5012.
    • (1994) EMBO J. , vol.13 , pp. 5002-5012
    • Pierrou, S.1    Hellqvist, M.2    Samuelsson, L.3    Enerbäck, S.4    Carlsson, P.5
  • 6
    • 0037423210 scopus 로고    scopus 로고
    • Absence of p21CIP rescues myogenic progenitor cell proliferative and regenerative capacity in Foxk1 null mice
    • Hawke, T.J., Jiang, N. and Garry, D.J. (2003) Absence of p21CIP rescues myogenic progenitor cell proliferative and regenerative capacity in Foxk1 null mice. J. Biol. Chem., 278, 4015-4020.
    • (2003) J. Biol. Chem. , vol.278 , pp. 4015-4020
    • Hawke, T.J.1    Jiang, N.2    Garry, D.J.3
  • 7
    • 0034650839 scopus 로고    scopus 로고
    • The winged-helix/forkhead protein myocyte nuclear factor beta (MNF-beta) forms a co-repressor complex with mammalian sin3B
    • Yang, Q., Kong, Y., Rothermel, B., Garry, DJ., Bassel-Duby, R. and Williams, R.S. (2000) The winged-helix/forkhead protein myocyte nuclear factor beta (MNF-beta) forms a co-repressor complex with mammalian sin3B. Biochem. J., 345, 335-343.
    • (2000) Biochem. J. , vol.345 , pp. 335-343
    • Yang, Q.1    Kong, Y.2    Rothermel, B.3    Garry, D.J.4    Bassel-Duby, R.5    Williams, R.S.6
  • 8
    • 84862027129 scopus 로고    scopus 로고
    • Sin3 interacts with Foxk1 and regulates myogenic progenitors
    • Shi, X. and Garry, D.J. (2012) Sin3 interacts with Foxk1 and regulates myogenic progenitors. Mol. Cell. Biochem., 366, 251-258.
    • (2012) Mol. Cell. Biochem. , vol.366 , pp. 251-258
    • Shi, X.1    Garry, D.J.2
  • 9
    • 34548587147 scopus 로고    scopus 로고
    • Functional interactions between the Forkhead transcription factor FOXK1 and the MADS-box protein SRF
    • Freddie, C.T., Ji, Z., Marais, A. and Sharrocks, A.D. (2007) Functional interactions between the Forkhead transcription factor FOXK1 and the MADS-box protein SRF. Nucleic Acids Res., 35, 5203-5212.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 5203-5212
    • Freddie, C.T.1    Ji, Z.2    Marais, A.3    Sharrocks, A.D.4
  • 10
    • 0025773849 scopus 로고
    • Cloning of a cellular factor, interleukin binding factor, that binds to NFAT-like motifs in the human immunodeficiency virus long terminal repeat
    • Li, C., Lai, C.F., Sigman, D.S. and Gaynor, R.B. (1991) Cloning of a cellular factor, interleukin binding factor, that binds to NFAT-like motifs in the human immunodeficiency virus long terminal repeat. Proc. Natl. Acad. Sci. U.S.A., 88, 7739-7743.
    • (1991) Proc. Natl. Acad. Sci. U.S.A. , vol.88 , pp. 7739-7743
    • Li, C.1    Lai, C.F.2    Sigman, D.S.3    Gaynor, R.B.4
  • 11
    • 77649125844 scopus 로고    scopus 로고
    • Adenovirus type 5 E1A and E6 proteins of low-risk cutaneous beta-human papillomaviruses suppress cell transformation through interaction with FOXK1/K2 transcription factors
    • Komorek, J., Kuppuswamy, M., Subramanian, T., Vijayalingam, S., Lomonosova, E., Zhao, L.J., Mymryk, J.S., Schmitt, K. and Chinnadurai, G. (2010) Adenovirus type 5 E1A and E6 proteins of low-risk cutaneous beta-human papillomaviruses suppress cell transformation through interaction with FOXK1/K2 transcription factors. J. Virol., 84, 2719-2731.
    • (2010) J. Virol. , vol.84 , pp. 2719-2731
    • Komorek, J.1    Kuppuswamy, M.2    Subramanian, T.3    Vijayalingam, S.4    Lomonosova, E.5    Zhao, L.J.6    Mymryk, J.S.7    Schmitt, K.8    Chinnadurai, G.9
  • 12
    • 84863025767 scopus 로고    scopus 로고
    • The forkhead transcription factor FOXK2 promotes AP-1-mediated transcriptional regulation
    • Ji, Z., Donaldson, I.J., Liu, J., Hayes, A., Zeef, L.A. and Sharrocks, A.D. (2012) The forkhead transcription factor FOXK2 promotes AP-1-mediated transcriptional regulation. Mol. Cell. Biol., 32, 385-398.
    • (2012) Mol. Cell. Biol. , vol.32 , pp. 385-398
    • Ji, Z.1    Donaldson, I.J.2    Liu, J.3    Hayes, A.4    Zeef, L.A.5    Sharrocks, A.D.6
  • 13
    • 78149237746 scopus 로고    scopus 로고
    • Cell cycle-dependent regulation of the Forkhead transcription factor FOXK2 by CDK-cyclin complexes
    • Marais, A., Ji, Z., Child, E.S., Krause, E., Mann, D.J. and Sharrocks, A.D. (2010) Cell cycle-dependent regulation of the Forkhead transcription factor FOXK2 by CDK-cyclin complexes. J. Biol. Chem., 285, 35728-35739.
    • (2010) J. Biol. Chem. , vol.285 , pp. 35728-35739
    • Marais, A.1    Ji, Z.2    Child, E.S.3    Krause, E.4    Mann, D.J.5    Sharrocks, A.D.6
  • 14
    • 77953704837 scopus 로고    scopus 로고
    • FOXK2 transcription factor is a novel G/T-mismatch DNA binding protein
    • Fujii, Y. and Nakamura, M. (2010) FOXK2 transcription factor is a novel G/T-mismatch DNA binding protein. J. Biochem., 147, 705-709.
    • (2010) J. Biochem. , vol.147 , pp. 705-709
    • Fujii, Y.1    Nakamura, M.2
  • 15
    • 79955934205 scopus 로고    scopus 로고
    • An emerging model for BAP1's role in regulating cell cycle progression
    • Eletr, Z.M. and Wilkinson, K.D. (2011) An emerging model for BAP1's role in regulating cell cycle progression. Cell Biochem. Biophys. 60, 3-11.
    • (2011) Cell Biochem. Biophys. , vol.60 , pp. 3-11
    • Eletr, Z.M.1    Wilkinson, K.D.2
  • 16
    • 0028211125 scopus 로고
    • The transcription factors Elk-1 and serum response factor interact by direct protein-protein contacts mediated by a short region of Elk-1
    • Shore, P. and Sharrocks, A.D. (1994) The transcription factors Elk-1 and serum response factor interact by direct protein-protein contacts mediated by a short region of Elk-1. Mol. Cell. Biol., 14, 283-291.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 283-291
    • Shore, P.1    Sharrocks, A.D.2
  • 19
    • 1342288026 scopus 로고    scopus 로고
    • Affy-analysis of Affymetrix GeneChip data at the probe level
    • Gautier, L., Cope, L., Bolstad, B.M. and Irizarry, R.A. (2004) Affy-analysis of Affymetrix GeneChip data at the probe level. Bioinformatics, 20, 307-315
    • (2004) Bioinformatics , vol.20 , pp. 307-315
    • Gautier, L.1    Cope, L.2    Bolstad, B.M.3    Irizarry, R.A.4
  • 20
    • 33644872577 scopus 로고    scopus 로고
    • Limma: Linear models for microarray data
    • Gentleman, R., Carey, V., Dudoit, S., Irizarry, R. and Huber, W. (eds). Springer, New York
    • Smyth, G. (2005) Limma: linear models for microarray data. In: Gentleman, R., Carey, V., Dudoit, S., Irizarry, R. and Huber, W. (eds). Bioinformatics and Computational Biology Solutions using R and Bioconductor. Springer, New York, pp. 397-420.
    • (2005) Bioinformatics and Computational Biology Solutions Using R and Bioconductor , pp. 397-420
    • Smyth, G.1
  • 21
    • 84858314394 scopus 로고    scopus 로고
    • BioMart: Driving a paradigm change in biological data management
    • Kasprzyk, A. (2011) BioMart: driving a paradigm change in biological data management. Database, 2011, bar049
    • (2011) Database , vol.2011
    • Kasprzyk, A.1
  • 23
    • 84878689941 scopus 로고    scopus 로고
    • HCFC1 is a common component of active human CpG-island promoters and coincides with ZNF143, THAP11, YY1, and GABP transcription factor occupancy
    • Michaud, J., Praz, V., James, Faresse, N., Jnbaptiste, C.K., Tyagi, S., Schütz, F. and Herr, W. (2013) HCFC1 is a common component of active human CpG-island promoters and coincides with ZNF143, THAP11, YY1, and GABP transcription factor occupancy. Genome Res., 23, 907-916.
    • (2013) Genome Res. , vol.23 , pp. 907-916
    • Michaud, J.1    Praz, V.2    James3    Faresse, N.4    Jnbaptiste, C.K.5    Tyagi, S.6    Schütz, F.7    Herr, W.8
  • 24
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead, B., Trapnell, C., Pop, M. and Salzberg, S.L. (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol., 10, R25.
    • (2009) Genome Biol. , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 25
    • 77952567987 scopus 로고    scopus 로고
    • Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B-cell identities
    • Heinz, S., Benner, C., Spann, N., Bertolino, E., Lin, Y.C., Laslo, P., Cheng, J.X., Murre, C., Singh, H. and Glass, C.K. (2010) Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B-cell identities. Mol. Cell, 38, 576-589.
    • (2010) Mol. Cell , vol.38 , pp. 576-589
    • Heinz, S.1    Benner, C.2    Spann, N.3    Bertolino, E.4    Lin, Y.C.5    Laslo, P.6    Cheng, J.X.7    Murre, C.8    Singh, H.9    Glass, C.K.10
  • 27
    • 67649634849 scopus 로고    scopus 로고
    • Defining the human deubiquitinating enzyme interaction landscape
    • Sowa, M.E., Bennett, E.J., Gygi, S.P. and Harper, J.W. (2009) Defining the human deubiquitinating enzyme interaction landscape. Cell, 138, 389-403.
    • (2009) Cell , vol.138 , pp. 389-403
    • Sowa, M.E.1    Bennett, E.J.2    Gygi, S.P.3    Harper, J.W.4
  • 28
    • 71749110779 scopus 로고    scopus 로고
    • The deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1
    • Machida, Y.J., Machida, Y., Vashisht, A.A., Wohlschlegel, J.A. and Dutta, A. (2009) The deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1. J. Biol. Chem., 284, 34179-34188.
    • (2009) J. Biol. Chem. , vol.284 , pp. 34179-34188
    • Machida, Y.J.1    Machida, Y.2    Vashisht, A.A.3    Wohlschlegel, J.A.4    Dutta, A.5
  • 29
    • 84873568880 scopus 로고    scopus 로고
    • The ASXL-BAP1 axis: New factors in myelopoiesis, cancer and epigenetics
    • Abdel-Wahab, O. and Dey, A. (2013) The ASXL-BAP1 axis: new factors in myelopoiesis, cancer and epigenetics. Leukemia, 27, 10-15.
    • (2013) Leukemia , vol.27 , pp. 10-15
    • Abdel-Wahab, O.1    Dey, A.2
  • 33
    • 84874116331 scopus 로고    scopus 로고
    • Chromatin: Receiver and quarterback for cellular signals
    • Johnson, D.G. and Dent, S.Y. (2013) Chromatin: receiver and quarterback for cellular signals. Cell, 152, 685-689.
    • (2013) Cell , vol.152 , pp. 685-689
    • Johnson, D.G.1    Dent, S.Y.2
  • 35
    • 34250823511 scopus 로고    scopus 로고
    • E2F activation of S phase promoters via association with HCF-1 and the MLL family of histone H3K4 methyltransferases
    • Tyagi, S., Chabes, A.L., Wysocka, J. and Herr, W. (2007) E2F activation of S phase promoters via association with HCF-1 and the MLL family of histone H3K4 methyltransferases. Mol. Cell 27, 107-119.
    • (2007) Mol. Cell , vol.27 , pp. 107-119
    • Tyagi, S.1    Chabes, A.L.2    Wysocka, J.3    Herr, W.4
  • 36
    • 79959694149 scopus 로고    scopus 로고
    • The nuclear deubiquitinase BAP1 is commonly inactivated by somatic mutations and 3p21.1 losses in malignant pleural mesothelioma
    • Bott, M., Brevet, M., Taylor, B.S., Shimizu, S., Ito, T., Wang, L., Creaney, J., Lake, RA., Zakowski, MF., Reva, B. et al. (2011) The nuclear deubiquitinase BAP1 is commonly inactivated by somatic mutations and 3p21.1 losses in malignant pleural mesothelioma. Nat. Genet., 43, 668-672.
    • (2011) Nat. Genet. , vol.43 , pp. 668-672
    • Bott, M.1    Brevet, M.2    Taylor, B.S.3    Shimizu, S.4    Ito, T.5    Wang, L.6    Creaney, J.7    Lake, R.A.8    Zakowski, M.F.9    Reva, B.10
  • 37
    • 77749304864 scopus 로고    scopus 로고
    • Role of the HCF-1 basic region in sustaining cell proliferation
    • Mangone, M., Myers, M.P. and Herr, W. (2010) Role of the HCF-1 basic region in sustaining cell proliferation. PLoS One, 5, e9020.
    • (2010) PLoS One , vol.5
    • Mangone, M.1    Myers, M.P.2    Herr, W.3
  • 38
    • 40849106789 scopus 로고    scopus 로고
    • Histone ubiquitination: Triggering gene activity
    • Weake, V.M. and Workman, J.L. (2008) Histone ubiquitination: triggering gene activity. Mol. Cell, 29, 653-663.
    • (2008) Mol. Cell , vol.29 , pp. 653-663
    • Weake, V.M.1    Workman, J.L.2
  • 39
    • 84880696681 scopus 로고    scopus 로고
    • Histone H2A monoubiquitination and Polycomb repression: The missing pieces of the puzzle
    • Scheuermann, J.C., Gutiérrez, L. and Müller, J. (2012) Histone H2A monoubiquitination and Polycomb repression: the missing pieces of the puzzle. Fly, 6, 162-168.
    • (2012) Fly , vol.6 , pp. 162-168
    • Scheuermann, J.C.1    Gutiérrez, L.2    Müller, J.3
  • 41
    • 84886035297 scopus 로고    scopus 로고
    • A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation
    • Iurlaro, M., Ficz, G., Oxley, D., Raiber, E.A., Bachman, M., Booth, M.J., Andrews, S., Balasubramanian, S. and Reik, W. (2013) A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation. Genome Biol., 14, R119.
    • (2013) Genome Biol. , vol.14
    • Iurlaro, M.1    Ficz, G.2    Oxley, D.3    Raiber, E.A.4    Bachman, M.5    Booth, M.J.6    Andrews, S.7    Balasubramanian, S.8    Reik, W.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.