-
1
-
-
3042764537
-
Chironomid egg masses as a natural reservoir of Vibrio cholerae non-O1 and non-O139 in freshwater habitats
-
Halpern M, Broza YB, Mittler S, Arakawa E, Broza M. 2004. Chironomid egg masses as a natural reservoir of Vibrio cholerae non-O1 and non-O139 in freshwater habitats. Microb. Ecol. 47:341-349. http://dx.doi.org/10.1007/s00248-003-2007-6.
-
(2004)
Microb. Ecol.
, vol.47
, pp. 341-349
-
-
Halpern, M.1
Broza, Y.B.2
Mittler, S.3
Arakawa, E.4
Broza, M.5
-
2
-
-
0020684907
-
Ecological relationships between Vibrio cholerae and planktonic crustacean copepods
-
Huq A, Small EB, West PA, Huq MI, Rahman R, Colwell RR. 1983. Ecological relationships between Vibrio cholerae and planktonic crustacean copepods. Appl. Environ. Microbiol. 45:275-283.
-
(1983)
Appl. Environ. Microbiol.
, vol.45
, pp. 275-283
-
-
Huq, A.1
Small, E.B.2
West, P.A.3
Huq, M.I.4
Rahman, R.5
Colwell, R.R.6
-
3
-
-
0025296833
-
Attachment of Vibrio cholerae serogroup-O1 to zooplankton and phytoplankton of Bangladesh waters
-
Tamplin ML, Gauzens AL, Huq A, Sack DA, Colwell RR. 1990. Attachment of Vibrio cholerae serogroup-O1 to zooplankton and phytoplankton of Bangladesh waters. Appl. Environ. Microbiol. 56:1977-1980.
-
(1990)
Appl. Environ. Microbiol.
, vol.56
, pp. 1977-1980
-
-
Tamplin, M.L.1
Gauzens, A.L.2
Huq, A.3
Sack, D.A.4
Colwell, R.R.5
-
4
-
-
3843069972
-
Cyclic diguanylate (c-di-GMP) regulates Vibrio cholerae biofilm formation
-
Tischler AD, Camilli A. 2004. Cyclic diguanylate (c-di-GMP) regulates Vibrio cholerae biofilm formation. Mol. Microbiol. 53:857-869. http://dx.doi.org/10.1111/j.1365-2958.2004.04155.x.
-
(2004)
Mol. Microbiol.
, vol.53
, pp. 857-869
-
-
Tischler, A.D.1
Camilli, A.2
-
5
-
-
4344688129
-
GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility
-
Simm R, Morr M, Kader A, Nimtz M, Romling U. 2004. GGDEF and EAL domains inversely regulate cyclic di-GMP levels and transition from sessility to motility. Mol. Microbiol. 53:1123-1134. http://dx.doi.org/10.1111/j.1365-2958.2004.04206.x.
-
(2004)
Mol. Microbiol.
, vol.53
, pp. 1123-1134
-
-
Simm, R.1
Morr, M.2
Kader, A.3
Nimtz, M.4
Romling, U.5
-
6
-
-
77950928649
-
Second messenger-mediated adjustment of bacterial swimming velocity
-
Boehm A, Kaiser M, Li H, Spangler C, Kasper CA, Ackermann M, Kaever V, Sourjik V, Roth V, Jenal U. 2010. Second messenger-mediated adjustment of bacterial swimming velocity. Cell 141:107-116. http://dx.doi.org/10.1016/j.cell.2010.01.018.
-
(2010)
Cell
, vol.141
, pp. 107-116
-
-
Boehm, A.1
Kaiser, M.2
Li, H.3
Spangler, C.4
Kasper, C.A.5
Ackermann, M.6
Kaever, V.7
Sourjik, V.8
Roth, V.9
Jenal, U.10
-
7
-
-
33644516891
-
Analysis of Pseudomonas aeruginosa diguanylate cyclases and phosphodiesterases reveals a role for bis-(3'-5')-cyclic-GMP in virulence
-
Kulasakara H, Lee V, Brencic A, Liberati N, Urbach J, Miyata S, Lee DG, Neely AN, Hyodo M, Hayakawa Y, Ausubel FM, Lory S. 2006. Analysis of Pseudomonas aeruginosa diguanylate cyclases and phosphodiesterases reveals a role for bis-(3'-5')-cyclic-GMP in virulence. Proc. Natl. Acad. Sci. U. S. A. 103:2839-2844. http://dx.doi.org/10.1073/pnas.0511090103.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 2839-2844
-
-
Kulasakara, H.1
Lee, V.2
Brencic, A.3
Liberati, N.4
Urbach, J.5
Miyata, S.6
Lee, D.G.7
Neely, A.N.8
Hyodo, M.9
Hayakawa, Y.10
Ausubel, F.M.11
Lory, S.12
-
8
-
-
0028844985
-
Identification of a novel response regulator required for the swarmer-to-stalked-cell transition in Caulobacter crescentus
-
Hecht GB, Newton A. 1995. Identification of a novel response regulator required for the swarmer-to-stalked-cell transition in Caulobacter crescentus. J. Bacteriol. 177:6223-6229.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 6223-6229
-
-
Hecht, G.B.1
Newton, A.2
-
9
-
-
0037346498
-
Role of the GGDEF regulator PleD in polar development of Caulobacter crescentus
-
Aldridge P, Paul R, Goymer P, Rainey P, Jenal U. 2003. Role of the GGDEF regulator PleD in polar development of Caulobacter crescentus. Mol. Microbiol. 47:1695-1708. http://dx.doi.org/10.1046/j.1365-2958.2003.03401.x.
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 1695-1708
-
-
Aldridge, P.1
Paul, R.2
Goymer, P.3
Rainey, P.4
Jenal, U.5
-
10
-
-
23944431512
-
Cyclic diguanylate regulates Vibrio cholerae virulence gene expression
-
Tischler AD, Camilli A. 2005. Cyclic diguanylate regulates Vibrio cholerae virulence gene expression. Infect. Immun. 73:5873-5882. http://dx.doi.org/10.1128/IAI.73.9.5873-5882.2005.
-
(2005)
Infect. Immun.
, vol.73
, pp. 5873-5882
-
-
Tischler, A.D.1
Camilli, A.2
-
11
-
-
2642554922
-
Bacterial signal transduction network in a genomic perspective
-
Galperin MY. 2004. Bacterial signal transduction network in a genomic perspective. Environ. Microbiol. 6:552-567. http://dx.doi.org/10.1111/j.1462-2920.2004.00633.x.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 552-567
-
-
Galperin, M.Y.1
-
12
-
-
33845400857
-
Cyclic di-GMP signaling in bacteria: recent advances and new puzzles
-
Ryan RP, Fouhy Y, Lucey JF, Dow JM. 2006. Cyclic di-GMP signaling in bacteria: recent advances and new puzzles. J. Bacteriol. 188:8327-8334. http://dx.doi.org/10.1128/JB.01079-06.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 8327-8334
-
-
Ryan, R.P.1
Fouhy, Y.2
Lucey, J.F.3
Dow, J.M.4
-
13
-
-
21844451590
-
The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: enzymatically active and inactive EAL domains
-
Schmidt AJ, Ryjenkov DA, Gomelsky M. 2005. The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: enzymatically active and inactive EAL domains. J. Bacteriol. 187:4774-4781. http://dx.doi.org/10.1128/JB.187.14.4774-4781.2005.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 4774-4781
-
-
Schmidt, A.J.1
Ryjenkov, D.A.2
Gomelsky, M.3
-
14
-
-
33646249963
-
Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover
-
Ryan RP, Fouhy Y, Lucey JF, Crossman LC, Spiro S, He YW, Zhang LH, Heeb S, Camara M, Williams P, Dow JM. 2006. Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover. Proc. Natl. Acad. Sci. U. S. A. 103:6712-6717. http://dx.doi.org/10.1073/pnas.0600345103.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 6712-6717
-
-
Ryan, R.P.1
Fouhy, Y.2
Lucey, J.F.3
Crossman, L.C.4
Spiro, S.5
He, Y.W.6
Zhang, L.H.7
Heeb, S.8
Camara, M.9
Williams, P.10
Dow, J.M.11
-
15
-
-
0035845587
-
Novel domains of the prokaryotic two-component signal transduction systems
-
Galperin MY, Nikolskaya AN, Koonin EV. 2001. Novel domains of the prokaryotic two-component signal transduction systems. FEMS Microbiol. Lett. 203:11-21. http://dx.doi.org/10.1111/j.1574-6968.2001.tb10814.x.
-
(2001)
FEMS Microbiol. Lett.
, vol.203
, pp. 11-21
-
-
Galperin, M.Y.1
Nikolskaya, A.N.2
Koonin, E.V.3
-
16
-
-
79960891629
-
Modulation of Pseudomonas aeruginosa surface-associated group behaviors by individual amino acids through c-di-GMP signaling
-
Bernier SP, Ha DG, Khan W, Merritt JH, O'Toole GA. 2011. Modulation of Pseudomonas aeruginosa surface-associated group behaviors by individual amino acids through c-di-GMP signaling. Res. Microbiol. 162: 680-688. http://dx.doi.org/10.1016/j.resmic.2011.04.014.
-
(2011)
Res. Microbiol.
, vol.162
, pp. 680-688
-
-
Bernier, S.P.1
Ha, D.G.2
Khan, W.3
Merritt, J.H.4
O'Toole, G.A.5
-
17
-
-
77955401388
-
H-NOX regulation of c-di-GMP metabolism and biofilm formation in Legionella pneumophila
-
Carlson HK, Vance RE, Marletta MA. 2010. H-NOX regulation of c-di-GMP metabolism and biofilm formation in Legionella pneumophila. Mol. Microbiol. 77:930-942. http://dx.doi.org/10.1111/j.1365-2958.2010.07259.x.
-
(2010)
Mol. Microbiol.
, vol.77
, pp. 930-942
-
-
Carlson, H.K.1
Vance, R.E.2
Marletta, M.A.3
-
18
-
-
84879826686
-
Structure and signaling mechanism of a zinc-sensory diguanylate cyclase
-
13 June
-
Zähringer F, Lacanna E, Jenal U, Schirmer T, Boehm A. 13 June 2013. Structure and signaling mechanism of a zinc-sensory diguanylate cyclase. Structure http://dx.doi.org/10.1016/j.str.2013.04.026.
-
(2013)
Structure
-
-
Zähringer, F.1
Lacanna, E.2
Jenal, U.3
Schirmer, T.4
Boehm, A.5
-
19
-
-
78650358413
-
Biochemical and physiological characterization of a BLUF protein-EAL protein complex involved in blue light-dependent degradation of cyclic diguanylate in the purple bacterium Rhodopseudomonas palustris
-
Kanazawa T, Ren S, Maekawa M, Hasegawa K, Arisaka F, Hyodo M, Hayakawa Y, Ohta H, Masuda S. 2010. Biochemical and physiological characterization of a BLUF protein-EAL protein complex involved in blue light-dependent degradation of cyclic diguanylate in the purple bacterium Rhodopseudomonas palustris. Biochemistry 49:10647-10655. http://dx.doi.org/10.1021/bi101448t.
-
(2010)
Biochemistry
, vol.49
, pp. 10647-10655
-
-
Kanazawa, T.1
Ren, S.2
Maekawa, M.3
Hasegawa, K.4
Arisaka, F.5
Hyodo, M.6
Hayakawa, Y.7
Ohta, H.8
Masuda, S.9
-
20
-
-
77950547731
-
Cell-cell signal-dependent dynamic interactions between HD-GYP and GGDEF domain proteins mediate virulence in Xanthomonas campestris
-
Ryan RP, McCarthy Y, Andrade M, Farah CS, Armitage JP, Dow JM. 2010. Cell-cell signal-dependent dynamic interactions between HD-GYP and GGDEF domain proteins mediate virulence in Xanthomonas campestris. Proc. Natl. Acad. Sci. U. S. A. 107:5989-5994. http://dx.doi.org/10.1073/pnas.0912839107.
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 5989-5994
-
-
Ryan, R.P.1
McCarthy, Y.2
Andrade, M.3
Farah, C.S.4
Armitage, J.P.5
Dow, J.M.6
-
21
-
-
81055141478
-
Bis-(3'-5')-cyclic dimeric GMP-linked quorum sensing controls swarming in Vibrio parahaemolyticus
-
Trimble MJ, McCarter LL. 2011. Bis-(3'-5')-cyclic dimeric GMP-linked quorum sensing controls swarming in Vibrio parahaemolyticus. Proc. Natl. Acad. Sci. U. S. A. 108:18079-18084. http://dx.doi.org/10.1073/pnas.1113790108.
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 18079-18084
-
-
Trimble, M.J.1
McCarter, L.L.2
-
22
-
-
70350047301
-
An oxygen-sensing diguanylate cyclase and phosphodiesterase couple for c-di-GMP control
-
Tuckerman JR, Gonzalez G, Sousa EHS, Wan XH, Saito JA, Alam M, Gilles-Gonzalez MA. 2009. An oxygen-sensing diguanylate cyclase and phosphodiesterase couple for c-di-GMP control. Biochemistry 48:9764-9774. http://dx.doi.org/10.1021/bi901409g.
-
(2009)
Biochemistry
, vol.48
, pp. 9764-9774
-
-
Tuckerman, J.R.1
Gonzalez, G.2
Sousa, E.H.S.3
Wan, X.H.4
Saito, J.A.5
Alam, M.6
Gilles-Gonzalez, M.A.7
-
23
-
-
64449088389
-
Globins synthesize the second messenger bis-(3'-5')-cyclic diguanosine monophosphate in bacteria
-
Wan XH, Tuckerman JR, Saito JA, Freitas TAK, Newhouse JS, Denery JR, Galperin MY, Gonzalez G, Gilles-Gonzalez MA, Alam M. 2009. Globins synthesize the second messenger bis-(3'-5')-cyclic diguanosine monophosphate in bacteria. J. Mol. Biol. 388:262-270. http://dx.doi.org/10.1016/j.jmb.2009.03.015.
-
(2009)
J. Mol. Biol.
, vol.388
, pp. 262-270
-
-
Wan, X.H.1
Tuckerman, J.R.2
Saito, J.A.3
Freitas, T.A.K.4
Newhouse, J.S.5
Denery, J.R.6
Galperin, M.Y.7
Gonzalez, G.8
Gilles-Gonzalez, M.A.9
Alam, M.10
-
24
-
-
27144544090
-
NspS, a predicted polyamine sensor, mediates activation of Vibrio cholerae biofilm formation by norspermidine
-
Karatan E, Duncan TR, Watnick PI. 2005. NspS, a predicted polyamine sensor, mediates activation of Vibrio cholerae biofilm formation by norspermidine. J. Bacteriol. 187:7434-7443. http://dx.doi.org/10.1128/JB.187.21.7434-7443.2005.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 7434-7443
-
-
Karatan, E.1
Duncan, T.R.2
Watnick, P.I.3
-
25
-
-
84868243384
-
Bile secretion and the enterohepatic circulation
-
Feldman M, Friedman LS, Brandt LJ (ed) (9th), WB Saunders, Philadelphia, PA
-
Dawson PA. 2010. Bile secretion and the enterohepatic circulation, p 1075-1088. In Feldman M, Friedman LS, Brandt LJ (ed), Sleisenger and Fordtran's gastrointestinal and liver disease (9th), vol 1. WB Saunders, Philadelphia, PA.
-
(2010)
Sleisenger and Fordtran's gastrointestinal and liver disease
, vol.1
, pp. 1075-1088
-
-
Dawson, P.A.1
-
26
-
-
0021786673
-
Physicochemical behavior of bile-salts
-
O'Connor CJ, Wallace RG. 1985. Physicochemical behavior of bile-salts. Adv. Colloid Interface Sci. 22:1-111. http://dx.doi.org/10.1016/0001-8686(85)80002-6.
-
(1985)
Adv. Colloid Interface Sci.
, vol.22
, pp. 1-111
-
-
O'Connor, C.J.1
Wallace, R.G.2
-
27
-
-
20444493331
-
The interaction between bacteria and bile
-
Begley M, Gahan CGM, Hill C. 2005. The interaction between bacteria and bile. FEMS Microbiol. Rev. 29:625-651. http://dx.doi.org/10.1016/j.femsre.2004.09.003.
-
(2005)
FEMS Microbiol. Rev.
, vol.29
, pp. 625-651
-
-
Begley, M.1
Gahan, C.G.M.2
Hill, C.3
-
28
-
-
0032789526
-
Bile salt activation of stress response promoters in Escherichia coli
-
Bernstein C, Bernstein H, Payne CM, Beard SE, Schneider J. 1999. Bile salt activation of stress response promoters in Escherichia coli. Curr. Microbiol. 39:68-72. http://dx.doi.org/10.1007/s002849900420.
-
(1999)
Curr. Microbiol.
, vol.39
, pp. 68-72
-
-
Bernstein, C.1
Bernstein, H.2
Payne, C.M.3
Beard, S.E.4
Schneider, J.5
-
29
-
-
0024237660
-
Structural changes in vesicle membranes and mixed micelles of various lipid compositions after binding of different bile salts
-
Schubert R, Schmidt KH. 1988. Structural changes in vesicle membranes and mixed micelles of various lipid compositions after binding of different bile salts. Biochemistry 27:8787-8794. http://dx.doi.org/10.1021/bi00424a015.
-
(1988)
Biochemistry
, vol.27
, pp. 8787-8794
-
-
Schubert, R.1
Schmidt, K.H.2
-
30
-
-
0023647098
-
Transbilayer movement of bile-acids in model membranes
-
Cabral DJ, Small DM, Lilly HS, Hamilton JA. 1987. Transbilayer movement of bile-acids in model membranes. Biochemistry 26:1801-1804. http://dx.doi.org/10.1021/bi00381a002.
-
(1987)
Biochemistry
, vol.26
, pp. 1801-1804
-
-
Cabral, D.J.1
Small, D.M.2
Lilly, H.S.3
Hamilton, J.A.4
-
31
-
-
0033970188
-
The virulence regulatory protein ToxR mediates enhanced bile resistance in Vibrio cholerae and other pathogenic Vibrio species
-
Provenzano D, Schuhmacher DA, Barker JL, Klose KE. 2000. The virulence regulatory protein ToxR mediates enhanced bile resistance in Vibrio cholerae and other pathogenic Vibrio species. Infect. Immun. 68: 1491-1497. http://dx.doi.org/10.1128/IAI.68.3.1491-1497.2000.
-
(2000)
Infect. Immun.
, vol.68
, pp. 1491-1497
-
-
Provenzano, D.1
Schuhmacher, D.A.2
Barker, J.L.3
Klose, K.E.4
-
32
-
-
0031983410
-
Isolation and characterization of a putative multidrug resistance pump from Vibrio cholerae
-
Colmer JA, Fralick JA, Hamood AN. 1998. Isolation and characterization of a putative multidrug resistance pump from Vibrio cholerae. Mol. Microbiol. 27:63-72. http://dx.doi.org/10.1046/j.1365-2958.1998.00657.x.
-
(1998)
Mol. Microbiol.
, vol.27
, pp. 63-72
-
-
Colmer, J.A.1
Fralick, J.A.2
Hamood, A.N.3
-
33
-
-
0034967448
-
Vibrio cholerae tolC is required for bile resistance and colonization
-
Bina JE, Mekalanos JJ. 2001. Vibrio cholerae tolC is required for bile resistance and colonization. Infect. Immun. 69:4681-4685. http://dx.doi.org/10.1128/IAI.69.7.4681-4685.2001.
-
(2001)
Infect. Immun.
, vol.69
, pp. 4681-4685
-
-
Bina, J.E.1
Mekalanos, J.J.2
-
34
-
-
48849102268
-
Vibrio cholerae RND family efflux systems are required for antimicrobial resistance, optimal virulence factor production, and colonization of the infant mouse small intestine
-
Bina XR, Provenzano D, Nguyen N, Bina JE. 2008. Vibrio cholerae RND family efflux systems are required for antimicrobial resistance, optimal virulence factor production, and colonization of the infant mouse small intestine. Infect. Immun. 76:3595-3605. http://dx.doi.org/10.1128/IAI.01620-07.
-
(2008)
Infect. Immun.
, vol.76
, pp. 3595-3605
-
-
Bina, X.R.1
Provenzano, D.2
Nguyen, N.3
Bina, J.E.4
-
35
-
-
33645052739
-
Bile acids stimulate biofilm formation in Vibrio cholerae
-
Hung DT, Zhu J, Sturtevant D, Mekalanos JJ. 2006. Bile acids stimulate biofilm formation in Vibrio cholerae. Mol. Microbiol. 59:193-201. http://dx.doi.org/10.1111/j.1365-2958.2005.04846.x.
-
(2006)
Mol. Microbiol.
, vol.59
, pp. 193-201
-
-
Hung, D.T.1
Zhu, J.2
Sturtevant, D.3
Mekalanos, J.J.4
-
36
-
-
8944220712
-
Toxin-coregulated pilus, but not mannosesensitive hemagglutinin, is required for colonization by Vibrio cholerae O1 El Tor biotype and O139 strains
-
Thelin KH, Taylor RK. 1996. Toxin-coregulated pilus, but not mannosesensitive hemagglutinin, is required for colonization by Vibrio cholerae O1 El Tor biotype and O139 strains. Infect. Immun. 64:2853-2856.
-
(1996)
Infect. Immun.
, vol.64
, pp. 2853-2856
-
-
Thelin, K.H.1
Taylor, R.K.2
-
37
-
-
0028358260
-
Analysis and construction of stable phenotypes in Gram-negative bacteria with Tn5-derived and Tn10-derived minitransposons
-
de Lorenzo V, Timmis KN. 1994. Analysis and construction of stable phenotypes in Gram-negative bacteria with Tn5-derived and Tn10-derived minitransposons. Methods Enzymol. 235:386-405. http://dx.doi.org/10.1016/0076-6879(94)35157-0.
-
(1994)
Methods Enzymol.
, vol.235
, pp. 386-405
-
-
de Lorenzo, V.1
Timmis, K.N.2
-
38
-
-
41549091882
-
Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT
-
Waters CM, Lu WY, Rabinowitz JD, Bassler BL. 2008. Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT. J. Bacteriol. 190:2527-2536. http://dx.doi.org/10.1128/JB.01756-07.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 2527-2536
-
-
Waters, C.M.1
Lu, W.Y.2
Rabinowitz, J.D.3
Bassler, B.L.4
-
39
-
-
0037047379
-
Parallel quorum sensing systems converge to regulate virulence in Vibrio cholerae
-
Miller MB, Skorupski K, Lenz DH, Taylor RK, Bassler BL. 2002. Parallel quorum sensing systems converge to regulate virulence in Vibrio cholerae. Cell 110:303-314. http://dx.doi.org/10.1016/S0092-8674(02)00829-2.
-
(2002)
Cell
, vol.110
, pp. 303-314
-
-
Miller, M.B.1
Skorupski, K.2
Lenz, D.H.3
Taylor, R.K.4
Bassler, B.L.5
-
40
-
-
0037022650
-
Quorum-sensing regulators control virulence gene expression in Vibrio cholerae
-
Zhu J, Miller MB, Vance RE, Dziejman M, Bassler BL, Mekalanos JJ. 2002. Quorum-sensing regulators control virulence gene expression in Vibrio cholerae. Proc. Natl. Acad. Sci. U. S. A. 99:3129-3134. http://dx.doi.org/10.1073/pnas.052694299.
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 3129-3134
-
-
Zhu, J.1
Miller, M.B.2
Vance, R.E.3
Dziejman, M.4
Bassler, B.L.5
Mekalanos, J.J.6
-
41
-
-
0033987775
-
H. pylori in the pathogenesis of duodenal ulcer: interaction between duodenal acid load, bile, and H. pylori
-
Graham DY, Osato MS. 2000. H. pylori in the pathogenesis of duodenal ulcer: interaction between duodenal acid load, bile, and H. pylori. Am. J. Gastroenterol. 95:87-91. http://dx.doi.org/10.1111/j.1572-0241.2000.01704.x.
-
(2000)
Am. J. Gastroenterol.
, vol.95
, pp. 87-91
-
-
Graham, D.Y.1
Osato, M.S.2
-
42
-
-
0015847127
-
Postprandial concentrations of free and conjugated bile acids down the length of the normal human small intestine
-
Northfield TC, McColl I. 1973. Postprandial concentrations of free and conjugated bile acids down the length of the normal human small intestine. Gut 14:513-518. http://dx.doi.org/10.1136/gut.14.7.513.
-
(1973)
Gut
, vol.14
, pp. 513-518
-
-
Northfield, T.C.1
McColl, I.2
-
43
-
-
0021814157
-
New medium for the production of cholera toxin by Vibrio cholerae 01 biotype El Tor
-
Iwanaga M, Yamamoto K. 1985. New medium for the production of cholera toxin by Vibrio cholerae 01 biotype El Tor. J. Clin. Microbiol. 22:405-408.
-
(1985)
J. Clin. Microbiol.
, vol.22
, pp. 405-408
-
-
Iwanaga, M.1
Yamamoto, K.2
-
44
-
-
0003903343
-
-
2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular cloning: a laboratory manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
45
-
-
84864498015
-
Quantification of high-specificity cyclic diguanylate signaling
-
Massie JP, Reynolds EL, Koestler BJ, Cong J-P, Agostoni M, Waters CM. 2012. Quantification of high-specificity cyclic diguanylate signaling. Proc. Natl. Acad. Sci. U. S. A. 109:12746-12751. http://dx.doi.org/10.1073/pnas.1115663109.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 12746-12751
-
-
Massie, J.P.1
Reynolds, E.L.2
Koestler, B.J.3
Cong, J.-P.4
Agostoni, M.5
Waters, C.M.6
-
46
-
-
80655125443
-
Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae
-
Srivastava D, Harris RC, Waters CM. 2011. Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae. J. Bacteriol. 193:6331-6341. http://dx.doi.org/10.1128/JB.05167-11.
-
(2011)
J. Bacteriol.
, vol.193
, pp. 6331-6341
-
-
Srivastava, D.1
Harris, R.C.2
Waters, C.M.3
-
47
-
-
0034612342
-
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
-
Datsenko KA, Wanner BL. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. U. S. A. 97:6640-6645. http://dx.doi.org/10.1073/pnas.120163297.
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
48
-
-
29144506940
-
Chitin induces natural competence in Vibrio cholerae
-
Meibom KL, Blokesch M, Dolganov NA, Wu CY, Schoolnik GK. 2005. Chitin induces natural competence in Vibrio cholerae. Science 310:1824-1827. http://dx.doi.org/10.1126/science.1120096.
-
(2005)
Science
, vol.310
, pp. 1824-1827
-
-
Meibom, K.L.1
Blokesch, M.2
Dolganov, N.A.3
Wu, C.Y.4
Schoolnik, G.K.5
-
49
-
-
66049146558
-
Quantifying the integration of quorum-sensing signals with singlecell resolution
-
e68
-
Long T, Tu KC, Wang YF, Mehta P, Ong NP, Bassler BL, Wingreen NS. 2009. Quantifying the integration of quorum-sensing signals with singlecell resolution. PLoS Biol. 7:e68. http://dx.doi.org/10.1371/journal.pbio.1000068.
-
(2009)
PLoS Biol.
, vol.7
-
-
Long, T.1
Tu, K.C.2
Wang, Y.F.3
Mehta, P.4
Ong, N.P.5
Bassler, B.L.6
Wingreen, N.S.7
-
50
-
-
78651109050
-
Systematic analysis of cyclic di-GMP signalling enzymes and their role in biofilm formation and virulence in Yersinia pestis
-
Bobrov AG, Kirillina O, Ryjenkov DA, Waters CM, Price PA, Fetherston JD, Mack D, Goldman WE, Gomelsky M, Perry RD. 2011. Systematic analysis of cyclic di-GMP signalling enzymes and their role in biofilm formation and virulence in Yersinia pestis. Mol. Microbiol. 79: 533-551. http://dx.doi.org/10.1111/j.1365-2958.2010.07470.x.
-
(2011)
Mol. Microbiol.
, vol.79
, pp. 533-551
-
-
Bobrov, A.G.1
Kirillina, O.2
Ryjenkov, D.A.3
Waters, C.M.4
Price, P.A.5
Fetherston, J.D.6
Mack, D.7
Goldman, W.E.8
Gomelsky, M.9
Perry, R.D.10
-
51
-
-
0022870839
-
Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector
-
Fürste JP, Pansegrau W, Frank R, Blocker H, Scholz P, Bagdasarian M, Lanka E. 1986. Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector. Gene 48:119-131. http://dx.doi.org/10.1016/0378-1119(86)90358-6.
-
(1986)
Gene
, vol.48
, pp. 119-131
-
-
Fürste, J.P.1
Pansegrau, W.2
Frank, R.3
Blocker, H.4
Scholz, P.5
Bagdasarian, M.6
Lanka, E.7
-
52
-
-
58149511939
-
Distinct sensory pathways in Vibrio cholerae El Tor and classical biotypes modulate cyclic dimeric GMP levels to control biofilm formation
-
Hammer BK, Bassler BL. 2009. Distinct sensory pathways in Vibrio cholerae El Tor and classical biotypes modulate cyclic dimeric GMP levels to control biofilm formation. J. Bacteriol. 191:169-177. http://dx.doi.org/10.1128/JB.01307-08.
-
(2009)
J. Bacteriol.
, vol.191
, pp. 169-177
-
-
Hammer, B.K.1
Bassler, B.L.2
-
53
-
-
42149119716
-
Role of cyclic di-GMP during el tor biotype Vibrio cholerae infection: characterization of the in vivo-induced cyclic di-GMP phosphodiesterase CdpA
-
Tamayo R, Schild S, Pratt JT, Camilli A. 2008. Role of cyclic di-GMP during el tor biotype Vibrio cholerae infection: characterization of the in vivo-induced cyclic di-GMP phosphodiesterase CdpA. Infect. Immun. 76: 1617-1627. http://dx.doi.org/10.1128/IAI.01337-07.
-
(2008)
Infect. Immun.
, vol.76
, pp. 1617-1627
-
-
Tamayo, R.1
Schild, S.2
Pratt, J.T.3
Camilli, A.4
-
54
-
-
0033611305
-
The continuing importance of bile acids in liver and intestinal disease
-
Hofmann AF. 1999. The continuing importance of bile acids in liver and intestinal disease. Arch. Intern. Med. 159:2647-2658. http://dx.doi.org/10.1001/archinte.159.22.2647.
-
(1999)
Arch. Intern. Med.
, vol.159
, pp. 2647-2658
-
-
Hofmann, A.F.1
-
55
-
-
0028568176
-
TOPPRED-II-an improved software for membrane-protein structure predictions
-
Claros MG, Vonheijne G. 1994. TOPPRED-II-an improved software for membrane-protein structure predictions. Comput. Appl. Biosci. 10: 685-686.
-
(1994)
Comput. Appl. Biosci.
, vol.10
, pp. 685-686
-
-
Claros, M.G.1
Vonheijne, G.2
-
56
-
-
70449403422
-
Mobyle: a new full web bioinformatics framework
-
Neron B, Menager H, Maufrais C, Joly N, Maupetit J, Letort S, Carrere S, Tuffery P, Letondal C. 2009. Mobyle: a new full web bioinformatics framework. Bioinformatics 25:3005-3011. http://dx.doi.org/10.1093/bioinformatics/btp493.
-
(2009)
Bioinformatics
, vol.25
, pp. 3005-3011
-
-
Neron, B.1
Menager, H.2
Maufrais, C.3
Joly, N.4
Maupetit, J.5
Letort, S.6
Carrere, S.7
Tuffery, P.8
Letondal, C.9
-
57
-
-
0033957469
-
SMART: a web-based tool for the study of genetically mobile domains
-
Schultz J, Copley RR, Doerks T, Ponting CP, Bork P. 2000. SMART: a web-based tool for the study of genetically mobile domains. Nucleic Acids Res. 28:231-234. http://dx.doi.org/10.1093/nar/28.1.231.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 231-234
-
-
Schultz, J.1
Copley, R.R.2
Doerks, T.3
Ponting, C.P.4
Bork, P.5
-
58
-
-
55549090691
-
Identification and characterization of cyclic diguanylate signaling systems controlling rugosity in Vibrio cholerae
-
Beyhan S, Odell LS, Yildiz FH. 2008. Identification and characterization of cyclic diguanylate signaling systems controlling rugosity in Vibrio cholerae. J. Bacteriol. 190:7392-7405. http://dx.doi.org/10.1128/JB.00564-08.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 7392-7405
-
-
Beyhan, S.1
Odell, L.S.2
Yildiz, F.H.3
-
59
-
-
84863692958
-
Cellular levels and binding of c-di-GMP control subcellular localization and activity of the Vibrio cholerae transcriptional regulator VpsT
-
e1002719
-
Shikuma NJ, Fong JCN, Yildiz FH. 2012. Cellular levels and binding of c-di-GMP control subcellular localization and activity of the Vibrio cholerae transcriptional regulator VpsT. PLoS Pathog. 8:e1002719. http://dx.doi.org/10.1371/journal.ppat.1002719.
-
(2012)
PLoS Pathog.
, vol.8
-
-
Shikuma, N.J.1
Fong, J.C.N.2
Yildiz, F.H.3
-
60
-
-
14544302240
-
Bile acids induce cholera toxin expression in Vibrio cholerae in a ToxT-independent manner
-
Hung DT, Mekalanos JJ. 2005. Bile acids induce cholera toxin expression in Vibrio cholerae in a ToxT-independent manner. Proc. Natl. Acad. Sci. U. S. A. 102:3028-3033. http://dx.doi.org/10.1073/pnas.0409559102.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 3028-3033
-
-
Hung, D.T.1
Mekalanos, J.J.2
-
61
-
-
84864118024
-
Gastroduodenal bicarbonate secretion
-
Johnson LR (ed), 5th ed, Elsevier, San Diego, CA
-
Seidler U, Sjöblom M. 2012. Gastroduodenal bicarbonate secretion, p 1311-1339. In Johnson LR (ed), Physiology of the gastrointestinal tract, 5th ed, vol 2. Elsevier, San Diego, CA.
-
(2012)
Physiology of the gastrointestinal tract
, vol.2
, pp. 1311-1339
-
-
Seidler, U.1
Sjöblom, M.2
-
63
-
-
69049095025
-
Bicarbonate induces Vibrio cholerae virulence gene expression by enhancing ToxT activity
-
Abuaita BH, Withey JH. 2009. Bicarbonate induces Vibrio cholerae virulence gene expression by enhancing ToxT activity. Infect. Immun. 77: 4111-4120. http://dx.doi.org/10.1128/IAI.00409-09.
-
(2009)
Infect. Immun.
, vol.77
, pp. 4111-4120
-
-
Abuaita, B.H.1
Withey, J.H.2
-
64
-
-
0034730163
-
Altered expression of the ToxRregulated porins OmpU and OmpT diminishes Vibrio cholerae bile resistance, virulence factor expression, and intestinal colonization
-
Provenzano D, Klose KE. 2000. Altered expression of the ToxRregulated porins OmpU and OmpT diminishes Vibrio cholerae bile resistance, virulence factor expression, and intestinal colonization. Proc. Natl. Acad. Sci. U. S. A. 97:10220-10224. http://dx.doi.org/10.1073/pnas.170219997.
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 10220-10224
-
-
Provenzano, D.1
Klose, K.E.2
-
65
-
-
0032987096
-
Environmental signals modulate ToxT-dependent virulence factor expression in Vibrio cholerae
-
Schuhmacher DA, Klose KE. 1999. Environmental signals modulate ToxT-dependent virulence factor expression in Vibrio cholerae. J. Bacteriol. 181:1508-1514.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 1508-1514
-
-
Schuhmacher, D.A.1
Klose, K.E.2
-
66
-
-
0031029971
-
Bile affects production of virulence factors and motility of Vibrio cholerae
-
Gupta S, Chowdhury R. 1997. Bile affects production of virulence factors and motility of Vibrio cholerae. Infect. Immun. 65:1131-1134.
-
(1997)
Infect. Immun.
, vol.65
, pp. 1131-1134
-
-
Gupta, S.1
Chowdhury, R.2
-
67
-
-
34147179428
-
Effect of fatty acids and cholesterol present in bile on expression of virulence factors and motility of Vibrio cholerae
-
Chatterjee A, Dutta PK, Chowdhury R. 2007. Effect of fatty acids and cholesterol present in bile on expression of virulence factors and motility of Vibrio cholerae. Infect. Immun. 75:1946-1953. http://dx.doi.org/10.1128/IAI.01435-06.
-
(2007)
Infect. Immun.
, vol.75
, pp. 1946-1953
-
-
Chatterjee, A.1
Dutta, P.K.2
Chowdhury, R.3
-
68
-
-
84873474536
-
Bile salt-induced intermolecular disulfide bond formation activates Vibrio cholerae virulence
-
Yang MH, Liu Z, Hughes C, Stern AM, Wang H, Zhong ZT, Kan B, Fenical W, Zhu J. 2013. Bile salt-induced intermolecular disulfide bond formation activates Vibrio cholerae virulence. Proc. Natl. Acad. Sci. U. S. A. 110:2348-2353. http://dx.doi.org/10.1073/pnas.1218039110.
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, pp. 2348-2353
-
-
Yang, M.H.1
Liu, Z.2
Hughes, C.3
Stern, A.M.4
Wang, H.5
Zhong, Z.T.6
Kan, B.7
Fenical, W.8
Zhu, J.9
-
69
-
-
84884261194
-
Exploring environmental control of cyclic di-GMP signaling in Vibrio cholerae by using the ex vivo lysate cyclic di-GMP assay (TELCA)
-
Koestler BJ, Waters CM. 2013. Exploring environmental control of cyclic di-GMP signaling in Vibrio cholerae by using the ex vivo lysate cyclic di-GMP assay (TELCA). Appl. Environ. Microbiol. 79:5233-5241. http://dx.doi.org/10.1128/AEM.01596-13.
-
(2013)
Appl. Environ. Microbiol.
, vol.79
, pp. 5233-5241
-
-
Koestler, B.J.1
Waters, C.M.2
-
70
-
-
66149128846
-
Indole acts as an extracellular cue regulating gene expression in Vibrio cholerae
-
Mueller RS, Beyhan S, Saini SG, Yildiz FH, Bartlett DH. 2009. Indole acts as an extracellular cue regulating gene expression in Vibrio cholerae. J. Bacteriol. 191:3504-3516. http://dx.doi.org/10.1128/JB.01240-08.
-
(2009)
J. Bacteriol.
, vol.191
, pp. 3504-3516
-
-
Mueller, R.S.1
Beyhan, S.2
Saini, S.G.3
Yildiz, F.H.4
Bartlett, D.H.5
-
71
-
-
84893203213
-
The Vibrio cholerae diguanylate cyclase VCA0965 has an AGDEF active site and synthesizes cyclic di-GMP
-
Hunter JL, Severin GB, Koestler BJ, Waters CM. 2014. The Vibrio cholerae diguanylate cyclase VCA0965 has an AGDEF active site and synthesizes cyclic di-GMP. BMC Microbiol. 14:22. http://dx.doi.org/10.1186/1471-2180-14-22.
-
(2014)
BMC Microbiol.
, vol.14
, pp. 22
-
-
Hunter, J.L.1
Severin, G.B.2
Koestler, B.J.3
Waters, C.M.4
-
72
-
-
67650532135
-
Genomic and systems evolution in Vibrionaceae species
-
Gu JY, Neary J, Cai H, Moshfeghian A, Rodriguez SA, Lilburn TG, Wang YF. 2009. Genomic and systems evolution in Vibrionaceae species. BMC Genomics 10(Suppl 1):S11. http://dx.doi.org/10.1186/1471-2164-10-S1-S11.
-
(2009)
BMC Genomics
, vol.10
, Issue.SUPPL. 1
-
-
Gu, J.Y.1
Neary, J.2
Cai, H.3
Moshfeghian, A.4
Rodriguez, S.A.5
Lilburn, T.G.6
Wang, Y.F.7
-
73
-
-
84874701109
-
ToxR recognizes a direct repeat element in the toxT, ompU, ompT and ctxA promoters of Vibrio cholerae to regulate transcription
-
Goss TJ, Morgan SJ, French EL, Krukonis ES. 2013. ToxR recognizes a direct repeat element in the toxT, ompU, ompT and ctxA promoters of Vibrio cholerae to regulate transcription. Infect. Immun. 81:884-895. http://dx.doi.org/10.1128/IAI.00889-12.
-
(2013)
Infect. Immun.
, vol.81
, pp. 884-895
-
-
Goss, T.J.1
Morgan, S.J.2
French, E.L.3
Krukonis, E.S.4
-
74
-
-
0037418294
-
ToxR regulon of Vibrio cholerae and its expression in vibrios shed by cholera patients
-
Bina J, Zhu J, Dziejman M, Faruque S, Calderwood S, Mekalanos J. 2003. ToxR regulon of Vibrio cholerae and its expression in vibrios shed by cholera patients. Proc. Natl. Acad. Sci. U. S. A. 100:2801-2806. http://dx.doi.org/10.1073/pnas.2628026100.
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 2801-2806
-
-
Bina, J.1
Zhu, J.2
Dziejman, M.3
Faruque, S.4
Calderwood, S.5
Mekalanos, J.6
-
75
-
-
0036956818
-
Bile stress response in Listeria monocytogenes LO28: adaptation, cross-protection, and identification of genetic loci involved in bile resistance
-
Begley M, Gahan CGM, Hill C. 2002. Bile stress response in Listeria monocytogenes LO28: adaptation, cross-protection, and identification of genetic loci involved in bile resistance. Appl. Environ. Microbiol. 68:6005-6012. http://dx.doi.org/10.1128/AEM.68.12.6005-6012.2002.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 6005-6012
-
-
Begley, M.1
Gahan, C.G.M.2
Hill, C.3
-
76
-
-
0141989893
-
Quorum sensing-dependent biofilms enhance colonization in Vibrio cholerae
-
Zhu J, Mekalanos JJ. 2003. Quorum sensing-dependent biofilms enhance colonization in Vibrio cholerae. Dev. Cell 5:647-656. http://dx.doi.org/10.1016/S1534-5807(03)00295-8.
-
(2003)
Dev. Cell
, vol.5
, pp. 647-656
-
-
Zhu, J.1
Mekalanos, J.J.2
-
77
-
-
77955297543
-
Growth in a biofilm induces a hyperinfectious phenotype in Vibrio cholerae
-
Tamayo R, Patimalla B, Camilli A. 2010. Growth in a biofilm induces a hyperinfectious phenotype in Vibrio cholerae. Infect. Immun. 78:3560-3569. http://dx.doi.org/10.1128/IAI.00048-10.
-
(2010)
Infect. Immun.
, vol.78
, pp. 3560-3569
-
-
Tamayo, R.1
Patimalla, B.2
Camilli, A.3
-
78
-
-
0023215922
-
pH of the microclimate lining human gastric and duodenal mucosa in vivo
-
Quigley EMM, Turnberg LA. 1987. pH of the microclimate lining human gastric and duodenal mucosa in vivo. Gastroenterology 92: 1876-1884.
-
(1987)
Gastroenterology
, vol.92
, pp. 1876-1884
-
-
Quigley, E.M.M.1
Turnberg, L.A.2
-
79
-
-
0034443263
-
Salmonella enterica serovar Typhimurium invasion is repressed in the presence of bile
-
Prouty AM, Gunn JS. 2000. Salmonella enterica serovar Typhimurium invasion is repressed in the presence of bile. Infect. Immun. 68:6763-6769. http://dx.doi.org/10.1128/IAI.68.12.6763-6769.2000.
-
(2000)
Infect. Immun.
, vol.68
, pp. 6763-6769
-
-
Prouty, A.M.1
Gunn, J.S.2
-
80
-
-
0038013943
-
From motility to virulence: sensing and responding to environmental signals in Vibrio cholerae
-
Krukonis ES, DiRita VJ. 2003. From motility to virulence: sensing and responding to environmental signals in Vibrio cholerae. Curr. Opin. Microbiol. 6:186-190. http://dx.doi.org/10.1016/S1369-5274(03)00032-8.
-
(2003)
Curr. Opin. Microbiol.
, vol.6
, pp. 186-190
-
-
Krukonis, E.S.1
DiRita, V.J.2
|