Homeostasis of the period of post-translational biochemical oscillators

FEBS Letters

Volumn 588, Issue 14, 2014, Pages 2282-2287

  Hatakeyama, Tetsuhiro S ^a   Kaneko, Kunihiko ^a  

^a UNIVERSITY OF TOKYO   (Japan)

Author keywords

Circadian clock; Enzyme limited competition; Nutrient compensation; Phosphorylation; Temperature compensation

Indexed keywords

BACTERIAL PROTEIN; PROTEIN KAIC; UNCLASSIFIED DRUG;

ARTICLE; CATALYSIS; CIRCADIAN RHYTHM; CYANOBACTERIUM; ENZYME SUBSTRATE; HOMEOSTASIS; OSCILLATION; PRIORITY JOURNAL; PROTEIN PROCESSING; TEMPERATURE; THEORETICAL MODEL;

CYANOBACTERIA;

CIRCADIAN CLOCK; ENZYME-LIMITED COMPETITION; NUTRIENT COMPENSATION; PHOSPHORYLATION; TEMPERATURE COMPENSATION;

ADENOSINE TRIPHOSPHATE; ALLOSTERIC REGULATION; BACTERIAL PROTEINS; BIOCATALYSIS; CIRCADIAN CLOCKS; COMPUTER SIMULATION; CYANOBACTERIA; HOMEOSTASIS; KINETICS; MODELS, BIOLOGICAL; NUTRITIONAL PHYSIOLOGICAL PHENOMENA; PHOSPHORYLATION; PROTEIN PROCESSING, POST-TRANSLATIONAL;

EID: 84902662139     PISSN: 00145793     EISSN: 18733468     Source Type: Journal    
DOI: 10.1016/j.febslet.2014.05.015     Document Type: Article

References (23)

1. P. Bergsten, and B. Hellman Glucose-induced amplitude regulation of pulsatile insulin secretion from individual pancreatic islets Diabetes 42 1993 670 674
2. D. Bell-Pedersen, V.M. Cassone, D.J. Earnest, S.S. Golden, P.E. Hardin, T.L. Thomas, and M.J. Zoran Circadian rhythms from multiple oscillators: lessons from diverse organisms Nat. Rev. Genet. 6 2005 544 556
3. K. Terauchi, Y. Kitayama, T. Nishiwaki, K. Miwa, Y. Murayama, T. Oyama, and T. Kondo ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria Proc. Natl. Acad. Sci. U.S.A. 104 2007 16377 16381
4. G. Sancar, C. Sancar, and M. Brunner Metabolic compensation of the Neurospora clock by a glucose-dependent feedback of the circadian repressor CSP1 on the core oscillator Genes Dev. 26 2012 2435 2442
5. C. Phong, J.S. Markson, C.M. Wilhoite, and M.J. Rust Robust and tunable circadian rhythms from differentially sensitive catalytic domains Proc. Natl. Acad. Sci. U.S.A. 110 2013 1124 1129
6. C.S. Pittendrigh, P.C. Caldarola, and E.S. Cosbey A differential effect of heavy water on temperature-dependent and temperature-compensated aspects of circadian system of Drosophila pseudoobscura Proc. Natl. Acad. Sci. U.S.A. 70 1973 2037 2041
7. M. McDaniel, F.M. Sulzman, and J.W. Hastings Heavy water slows the Gonyaulax clock: a test of the hypothesis that D2O affects circadian oscillations by diminishing the apparent temperature Proc. Natl. Acad. Sci. U.S.A. 71 1974 4389 4391
8. M. Nakajima, K. Imai, H. Ito, T. Nishiwaki, Y. Murayama, H. Iwasaki, T. Oyama, and T. Kondo Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro Science 308 2005 414 415
9. H. Kageyama, T. Kondo, and H. Iwasaki Circadian formation of clock protein complexes by KaiA, KaiB, KaiC, and SasA in cyanobacteria J. Biol. Chem. 278 2003 2388 2395
10. T. Nishiwaki, H. Iwasaki, M. Ishiura, and T. Kondo Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria Proc. Natl. Acad. Sci. U.S.A. 97 2000 495 499
11. Y. Xu, T. Mori, and C.H. Johnson Cyanobacterial circadian clockwork: roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC EMBO J. 22 2003 2117 2126
12. H. Iwasaki, T. Nishiwaki, Y. Kitayama, M. Nakajima, and T. Kondo KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria Proc. Natl. Acad. Sci. U.S.A. 99 2002 15788 15793
13. S.B. Williams, I. Vakonakis, S.S. Golden, and A.C. LiWang Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: a potential clock input mechanism Proc. Natl. Acad. Sci. U.S.A. 99 2002 15357 15362
14. T.S. Hatakeyama, and K. Kaneko Generic temperature compensation of biological clocks by autonomous regulation of catalyst concentration Proc. Natl. Acad. Sci. U.S.A. 109 2012 8109 8114
15. J.S. van Zon, D.K. Lubensky, P.R.H. Altena, and P.R. ten Wolde An allosteric model of circadian KaiC phosphorylation Proc. Natl. Acad. Sci. U.S.A. 104 2007 7420 7425
16. J. Monod, J. Wyman, and J.P. Changeux On the nature of allosteric transitions: a plausible model J. Mol. Biol. 12 1965 88 118
17. M. Nakajima, H. Ito, and T. Kondo In vitro regulation of circadian phosphorylation rhythm of cyanobacterial clock protein KaiC by KaiA and KaiB FEBS Lett. 584 2010 898 902
18. R. Tseng, Y.-G. Chang, I. Bravo, R. Latham, A. Chaudhary, N.-W. Kuo, and A. Liwang Cooperative KaiA-KaiB-KaiC interactions affect KaiB/SasA competition in the circadian clock of cyanobacteria J. Mol. Biol. 426 2014 389 402
19. T. Nishiwaki, Y. Satomi, Y. Kitayama, K. Terauchi, R. Kiyohara, T. Takao, and T. Kondo A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria EMBO J. 26 2007 4029 4037
20. M.J. Rust, J.S. Markson, W.S. Lane, D.S. Fisher, and E.K. O'Shea Ordered phosphorylation governs oscillation of a three-protein circadian clock Science 318 2007 809 812
21. V.G. Bruce, and C.S. Pittendrigh An effect of heavy water on the phase and period of the circadian rhythm in euglena J. Cell. Comp. Physiol. 56 1960 25 31
22. J. Enright Heavy water slows biological timing processes Zeitschrift für vergleichende Physiol. 16 1971 1 16
23. C.C. Jolley, K.L. Ode, and H.R. Ueda A design principle for a posttranslational biochemical oscillator Cell Rep. 2 2012 938 950