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Volumn 15, Issue 1, 2014, Pages

Efficient de novo assembly of large and complex genomes by massively parallel sequencing of Fosmid pools

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

EID: 84902553599     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-15-439     Document Type: Article
Times cited : (7)

References (13)
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    • F conjugation: back to the beginning
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    • (2013) Plasmid , vol.70 , pp. 18-32
    • Arutyunov, D.1    Frost, L.S.2
  • 2
    • 0026594245 scopus 로고
    • Stable propagation of cosmid sized human DNA inserts in an F factor based vector
    • 10.1093/nar/20.5.1083, 312094, 1549470
    • Kim UJ, Shizuya H, de Jong PJ, Birren B, Simon MI. Stable propagation of cosmid sized human DNA inserts in an F factor based vector. Nucleic Acids Res 1992, 20:1083-1085. 10.1093/nar/20.5.1083, 312094, 1549470.
    • (1992) Nucleic Acids Res , vol.20 , pp. 1083-1085
    • Kim, U.J.1    Shizuya, H.2    de Jong, P.J.3    Birren, B.4    Simon, M.I.5
  • 5
    • 0348013052 scopus 로고    scopus 로고
    • Clone-based systematic haplotyping (CSH): a procedure for physical haplotyping of whole genomes
    • 10.1101/gr.1442303, 403814, 14656974
    • Burgtorf C, Kepper P, Hoehe M, Schmitt C, Reinhardt R, Lehrach H, Sauer S. Clone-based systematic haplotyping (CSH): a procedure for physical haplotyping of whole genomes. Genome Res 2003, 13:2717-2724. 10.1101/gr.1442303, 403814, 14656974.
    • (2003) Genome Res , vol.13 , pp. 2717-2724
    • Burgtorf, C.1    Kepper, P.2    Hoehe, M.3    Schmitt, C.4    Reinhardt, R.5    Lehrach, H.6    Sauer, S.7
  • 9
    • 68549104404 scopus 로고    scopus 로고
    • 1000 Genome Project Data Processing Subgroup. The sequence alignment/map format and SAMtools
    • 10.1093/bioinformatics/btp352, 2723002, 19505943
    • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 1000 Genome Project Data Processing Subgroup. The sequence alignment/map format and SAMtools. Bioinformatics 2009, 25(16):2078-2079. 10.1093/bioinformatics/btp352, 2723002, 19505943.
    • (2009) Bioinformatics , vol.25 , Issue.16 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3    Fennell, T.4    Ruan, J.5    Homer, N.6    Marth, G.7    Abecasis, G.8    Durbin, R.9
  • 10
    • 0025183708 scopus 로고
    • Basic local alignment search tool
    • 10.1016/S0022-2836(05)80360-2, 2231712
    • Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410. 10.1016/S0022-2836(05)80360-2, 2231712.
    • (1990) J Mol Biol , vol.215 , pp. 403-410
    • Altschul, S.F.1    Gish, W.2    Miller, W.3    Myers, E.W.4    Lipman, D.J.5
  • 11
    • 84856557873 scopus 로고    scopus 로고
    • Feature-by-feature - evaluating de novo sequence assembly
    • Vezzi F, Narzisi G, Mishra B. Feature-by-feature - evaluating de novo sequence assembly. PLoS One 2012, 2:e31002.
    • (2012) PLoS One , vol.2
    • Vezzi, F.1    Narzisi, G.2    Mishra, B.3
  • 12
    • 84865546399 scopus 로고    scopus 로고
    • Improved gap size estimation for scaffolding algorithms
    • 10.1093/bioinformatics/bts441, 22923455
    • Sahlin K, Street N, Lundeberg J, Arvestad L. Improved gap size estimation for scaffolding algorithms. Bioinformatics 2012, 28:2215-2222. 10.1093/bioinformatics/bts441, 22923455.
    • (2012) Bioinformatics , vol.28 , pp. 2215-2222
    • Sahlin, K.1    Street, N.2    Lundeberg, J.3    Arvestad, L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.