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Volumn 26, Issue 10, 2014, Pages 1744-1759

Standards-based metadata management for molecular simulations

Author keywords

metadata management; molecular simulations; MSML; science gateway

Indexed keywords

MARKUP LANGUAGES; METADATA; MOLECULAR DYNAMICS; MOLECULAR STRUCTURE; PROTEINS; QUANTUM CHEMISTRY; SEMANTICS;

EID: 84902545391     PISSN: 15320626     EISSN: 15320634     Source Type: Journal    
DOI: 10.1002/cpe.3116     Document Type: Conference Paper
Times cited : (29)

References (47)
  • 1
    • 79951736704 scopus 로고    scopus 로고
    • Ion permeation simulations by gromacs an example of high performance molecular dynamics
    • Krüger J, Fels G,. Ion permeation simulations by gromacs an example of high performance molecular dynamics. Concurrency and Computation: Practice and Experience 2010; 23: 279-291.
    • (2010) Concurrency and Computation: Practice and Experience , vol.23 , pp. 279-291
    • Krüger, J.1    Fels, G.2
  • 4
    • 79951855300 scopus 로고    scopus 로고
    • P-GRADE portal: A generic workflow system to support user communities
    • Farkas Z, Kacsuk P,. P-GRADE portal: a generic workflow system to support user communities. Future Generation Computer Systems 2011; 27 (5): 454-465.
    • (2011) Future Generation Computer Systems , vol.27 , Issue.5 , pp. 454-465
    • Farkas, Z.1    Kacsuk, P.2
  • 10
    • 84902535212 scopus 로고    scopus 로고
    • [27 February 2013]
    • Inc. Liferay. http://www.liferay.com [27 February 2013].
  • 11
    • 84902535213 scopus 로고    scopus 로고
    • [27 February 2013]
    • Vaadin. http://vaadin.com/ [27 February 2013].
  • 12
    • 84902535214 scopus 로고    scopus 로고
    • [05 June 2013]
    • ChemDoodle. http://www.chemdoodle.com/ [05 June 2013].
  • 13
    • 84902535205 scopus 로고    scopus 로고
    • [05 June 2013]
    • Dygraphs. http://dygraphs.com/ [05 June 2013].
  • 16
    • 0035013293 scopus 로고    scopus 로고
    • Development of chemical markup language (CML) as a system for handling complex chemical content
    • Murray-Rust P, Rzepa HS, Wright M,. Development of chemical markup language (CML) as a system for handling complex chemical content. New Journal of Chemistry 2001; 25 (4): 618-634.
    • (2001) New Journal of Chemistry , vol.25 , Issue.4 , pp. 618-634
    • Murray-Rust, P.1    Rzepa, H.S.2    Wright, M.3
  • 17
    • 0035470282 scopus 로고    scopus 로고
    • Chemical markup, XML and the World-Wide Web. 2. Information objects and the cmldom
    • Murray-Rust P, Rzepa HS,. Chemical markup, XML and the World-Wide Web. 2. Information objects and the cmldom. Journal of Chemical Information and Computer Sciences 2001; 41 (5): 1113-1123.
    • (2001) Journal of Chemical Information and Computer Sciences , vol.41 , Issue.5 , pp. 1113-1123
    • Murray-Rust, P.1    Rzepa, H.S.2
  • 25
    • 84867367653 scopus 로고    scopus 로고
    • A flexible, grid-enabled web portal for GROMACS molecular dynamics simulations
    • DOI: 10.1021/ct300102d.
    • van Dijk M, Wassenaar TA, Bonvin MJJ,. A flexible, grid-enabled web portal for GROMACS molecular dynamics simulations. Journal of Chemical Theory and Computation 2012; 8 (19): 3463-3472. DOI: 10.1021/ct300102d.
    • (2012) Journal of Chemical Theory and Computation , vol.8 , Issue.19 , pp. 3463-3472
    • Van Dijk, M.1    Wassenaar, T.A.2    Bonvin, M.J.J.3
  • 33
    • 80052814353 scopus 로고    scopus 로고
    • Structural stability of V-amylose helices in water-DMSO mixtures analysed by molecular dynamics
    • Tusch M, Krüger J, Fels G,. Structural stability of V-amylose helices in water-DMSO mixtures analysed by molecular dynamics. Journal of Chemical Theory and Computation 2011; 7 (9): 2919-2928.
    • (2011) Journal of Chemical Theory and Computation , vol.7 , Issue.9 , pp. 2919-2928
    • Tusch, M.1    Krüger, J.2    Fels, G.3
  • 34
    • 52649086195 scopus 로고    scopus 로고
    • Exploring the conformational space of Vpu from HIV-1: A versatile adaptable protein
    • Krüger J, Fischer WB,. Exploring the conformational space of Vpu from HIV-1: a versatile adaptable protein. Journal of Computational Chemistry 2008; 28 (14): 2416-2424.
    • (2008) Journal of Computational Chemistry , vol.28 , Issue.14 , pp. 2416-2424
    • Krüger, J.1    Fischer, W.B.2
  • 37
    • 84902535207 scopus 로고    scopus 로고
    • TURBOMOLE V6.2. A Development of University of Karlsruhe and Forschungszentrum Karlsruhe GmbH, 1989-2007, since 2007
    • TURBOMOLE V6.2 2010. A Development of University of Karlsruhe and Forschungszentrum Karlsruhe GmbH, 1989-2007, TURBOMOLE GmbH, since 2007. http://www.turbomole.com.
    • (2010)
  • 40
    • 0030599010 scopus 로고    scopus 로고
    • A fast flexible docking method using an incremental construction algorithm
    • Rarey M, Kramer B, Lengauer T, Klebe G,. A fast flexible docking method using an incremental construction algorithm. Journal of molecular biology 1996; 261 (3): 470-489.
    • (1996) Journal of Molecular Biology , vol.261 , Issue.3 , pp. 470-489
    • Rarey, M.1    Kramer, B.2    Lengauer, T.3    Klebe, G.4
  • 41
    • 84902132101 scopus 로고    scopus 로고
    • CADDSuite - A workflow-enabled suite of open-source tools for drug discovery
    • DOI: 10.1186/1758-2946-4-S1-O2.
    • Kohlbacher O,. CADDSuite-a workflow-enabled suite of open-source tools for drug discovery. Journal of Cheminformatics 2012; 4 (1): 02. DOI: 10.1186/1758-2946-4-S1-O2.
    • (2012) Journal of Cheminformatics , vol.4 , Issue.1 , pp. 02
    • Kohlbacher, O.1
  • 42
    • 84902535208 scopus 로고    scopus 로고
    • [27 February 2013]
    • Apache Lucene. http://lucene.apache.org [27 February 2013].
  • 44
    • 33745135773 scopus 로고    scopus 로고
    • Recent developments of the chemistry development kit (CDK) - An open-source Java library for chemo- and bioinformatics
    • Steinbeck C, Hoppe C, Kuhn S, Floris M, Guha R, Willighagen EL,. Recent developments of the chemistry development kit (CDK)-an open-source Java library for chemo- and bioinformatics. Current Pharmaceutical Design 2006; 12 (17): 2111-2120.
    • (2006) Current Pharmaceutical Design , vol.12 , Issue.17 , pp. 2111-2120
    • Steinbeck, C.1    Hoppe, C.2    Kuhn, S.3    Floris, M.4    Guha, R.5    Willighagen, E.L.6
  • 46
    • 84902552069 scopus 로고    scopus 로고
    • [05 June 2013]
    • MoSGrid Open Source Release. http//developer.berlios.de/projects/mosgrid/ [05 June 2013].
    • MoSGrid Open Source Release
  • 47
    • 84866759757 scopus 로고    scopus 로고
    • Pragmatic Integration of Cloud and Grid Computing Infrastructures
    • IEEE Computer Society, Honolulu
    • Rings T, Grabowski J,. Pragmatic Integration of Cloud and Grid Computing Infrastructures. IEEE Fifth International Conference on Cloud Computing, IEEE Computer Society, Honolulu, 2012; 710-717.
    • (2012) IEEE Fifth International Conference on Cloud Computing , pp. 710-717
    • Rings, T.1    Grabowski, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.