Diffusion tensor image registration using hybrid connectivity and tensor features

Human Brain Mapping

Volumn 35, Issue 7, 2014, Pages 3529-3546

  Wang, Qian ^a,b,c   Yap, Pew Thian ^b   Wu, Guorong ^b   Shen, Dinggang ^b,d  

^a SHANGHAI JIAO TONG UNIVERSITY   (China)

^b UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

^c University of North Carolina   (United States)

^d Korea University   (South Korea)

Author keywords

Connectivity features; Correspondence detection; Diffusion tensor image registration; Tensor features

Indexed keywords

ADULT; ARTICLE; BRAIN FUNCTION; BRAIN MAPPING; BRAIN TISSUE; CONNECTOME; CORRESPONDENCE ANALYSIS; DIFFUSION TENSOR IMAGING; FEMALE; HUMAN; INFORMATION PROCESSING; MALE; NEUROANATOMY; NEUROIMAGING; NUCLEAR MAGNETIC RESONANCE SCANNER; PRIORITY JOURNAL; REGISTER; VOXEL BASED MORPHOMETRY; ANATOMY AND HISTOLOGY; BIOLOGICAL MODEL; BRAIN; COMPUTER ASSISTED DIAGNOSIS; COMPUTER SIMULATION; NERVE TRACT; PHYSIOLOGY; STATISTICS AND NUMERICAL DATA;

BRAIN; BRAIN MAPPING; COMPUTER SIMULATION; DATASETS AS TOPIC; DIFFUSION TENSOR IMAGING; HUMANS; IMAGE INTERPRETATION, COMPUTER-ASSISTED; MODELS, NEUROLOGICAL; NEURAL PATHWAYS;

EID: 84902154609     PISSN: 10659471     EISSN: 10970193     Source Type: Journal    
DOI: 10.1002/hbm.22419     Document Type: Article

References (43)

1. Alexander DC, Gee JC (2000): Elastic matching of diffusion tensor images. Comput Vis Image Understand 77:233-250.
2. Alexander DC, Pierpaoli C, Basser PJ, Gee JC (2001): Spatial transformations of diffusion tensor magnetic resonance images. IEEE Trans Med Imaging 20:1131-1139.
3. Arsigny V, Fillard P, Pennec X, Ayache N (2006): Log-Euclidean metrics for fast and simple calculus on diffusion tensors. Magn Reson Med 56:411-421.
4. Bærentzen JA (2001): On the Implementation of Fast Marching Methods for 3D Lattices. Informatics and Mathematical Modelling, Technical Report IMM-REP-2001-13, Technical University of Denmark.
5. Basser PJ, Mattiello J, LeBihan D (1994): MR diffusion tensor spectroscopy and imaging. Biophys J 66:259-267.
6. Bookstein FL (1989): Principal warps: Thin-plate splines and the decomposition of deformations. IEEE Trans Pattern Anal Mach Intell 11:567-585.
7. Chiang MC, Leow AD, Klunder AD, Dutton RA, Barysheva M, Rose SE, McMahon KL, de Zubicaray GI, Toga AW, Thompson PM (2008): Fluid registration of diffusion tensor images using information theory. IEEE Trans Med Imaging 27:442-456.
8. Chui H, Rangarajan A (2003): A new point matching algorithm for non-rigid registration. Comput Vis Image Understand 89:114-141.
9. Gee JC, Alexander DC (2006): Diffusion-tensor image registration. In: Weickert J, Hagen H, editors. Visualization and Processing of Tensor Fields. Berlin, Heidelberg: Springer. pp 327-342.
10. Gerig G, Gouttard S, Corouge I (2004): Analysis of brain white matter via fiber tract modeling. Conf Proc IEEE Eng Med Biol Soc 6:4421-4424.
11. Goodlett C, Davis B, Jean R, Gilmore J, Gerig G (2006): Improved Correspondence for DTI Population Studies via Unbiased Atlas Building. In Medical Image Computing and Computer-Assisted Intervention-MICCAI 2006, pp. 260-267. Springer Berlin Heidelberg, 2006.
12. Guimond A, Guttmann CRG, Warfield SK, Westin CF (2002): Deformable Registration of DT-MRI Data Based on Transformation Invariant Tensor Characteristics. ISBI. pp 761-764.
13. Hassouna MS, Farag AA (2007): Multistencils fast marching methods: A highly accurate solution to the Eikonal equation on Cartesian domains. IEEE Trans Pattern Anal Mach Intell 29:1563-1574.
14. Ingalhalikar M, Yang J, Davatzikos C, Verma R (2010): DTI-DROID: Diffusion tensor imaging-deformable registration using orientation and intensity descriptors. Int J Imag Syst Technol 20:99-107.
15. Irfanoglu MO, Machiraju R, Sammet S, Pierpaoli C, Knopp MV (2008): Automatic deformable diffusion tensor registration for fiber population analysis. In Medical Image Computing and Computer-Assisted Intervention-MICCAI 2008, pp. 1014-1022. Springer Berlin Heidelberg, 2008.
16. Jenkinson M, Smith S (2001): A global optimisation method for robust affine registration of brain images. Med Image Anal 5:143-156.
17. Jia H, Yap PT, Wu G, Wang Q, Shen D (2011): Intermediate templates guided groupwise registration of diffusion tensor images. NeuroImage 54:928-939.
18. Jiang H, van Zijl PC, Kim J, Pearlson GD, Mori S (2006): DtiStudio: Resource program for diffusion tensor computation and fiber bundle tracking. Comput Methods Programs Biomed 81:106-116.
19. Li H, Xue Z, Guo L, Wong SC (2009): Simultaneous consideration of spatial deformation and tensor orientation in diffusion tensor image registration using local fast marching patterns. In: Prince J, Pham D, Myers K, editors. Information Processing in Medical Imaging. Berlin, Heidelberg: Springer. pp 63-75.
20. Mori S, van Zijl PC (2002): Fiber tracking: Principles and strategies-a technical review. NMR Biomed 15:468-480.
21. Mori S, Oishi K, Jiang H, Jiang L, Li X, Akhter K, Hua K, Faria AV, Mahmood A, Woods R, Toga AW, Pike GB, Neto PR, Evans A, Zhang J, Huang H, Miller MI, van Zijl P, Mazziotta J (2008): Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template. Neuroimage 40:570-582.
22. Park HJ, Kubicki M, Shenton ME, Guimond A, McCarley RW, Maier SE, Kikinis R, Jolesz FA, Westin CF (2003): Spatial normalization of diffusion tensor MRI using multiple channels. Neuroimage 20:1995-2009.
23. Rohde GK, Pajevic S, Pierpaoli C, Basser PJ (2003): A comprehensive approach for multi-channel image registration. Biomedical image registration. Berlin/Heidelberg: Springer. pp 214-223.
24. Ruiz-Alzola J, Westin CF, Warfield SK, Alberola C, Maier S, Kikinis R (2002): Nonrigid registration of 3D tensor medical data. Med Image Anal 6:143-161.
25. Sethian JA (1996): A fast marching level set method for monotonically advancing fronts. Proc Natl Acad Sci USA 93:1591-1595.
26. Shen D, Wong WH, Ip HH (1999): Affine-invariant image retrieval by correspondence matching of shapes. Image and Vision Computing 17:489-499.
27. Siless V, Glaunès J, Guevara P, Mangin J-F, Poupon C, Bihan D, Thirion B, Fillard P (2012): Joint T1 and brain fiber log-demons registration using currents to model geometry. In: Ayache N, Delingette H, Golland P, Mori K, editors. Medical Image Computing and Computer-Assisted Intervention (ICCAI 2012). Berlin, Heidelberg: Springer. pp 57-65.
28. van Hecke W, Leemans A, D'Agostino E, de Backer S, Vandervliet E, Parizel PM, Sijbers J (2007): Nonrigid coregistration of diffusion tensor images using a viscous fluid model and mutual information. IEEE Trans Med Imaging 26:1598-1612.
29. Vercauteren T, Pennec X, Perchant A, Ayache N (2009): Diffeomorphic demons: Efficient non-parametric image registration. Neuroimage 45:S61-S72.
30. Verma R, Davatzikos C (2004): Matching of diffusion tensor images using Gabor features. IEEE Int Symp Biomed Imag: Nano Macro 391:396-399.
31. Wang Q, Wu G, Yap PT, Shen D (2010): Attribute vector guided groupwise registration. Neuroimage 50:1485-1496.
32. Wang Q, Yap PT, Wu G, Shen D ( 2011): Diffusion Tensor Image Registration with Combined Tract and Tensor Features. In Medical Image Computing and Computer-Assisted Intervention-MICCAI 2011. pp. 200-208. Springer Berlin Heidelberg, 2011.
33. Wang Q, Yap PT, Wu G, Shen D: Application of neuroanatomical features to tractography clustering. Hum Brain Mapp (in press).
34. Wu G, Qi F, Shen D (2006): Learning-based deformable registration of MR brain images Medical Imaging, IEEE Transactions on 25:1145-1157.
35. Xu D, Mori S, Shen D, van Zijl PC, Davatzikos C (2003): Spatial normalization of diffusion tensor fields. Magn Reson Med 50:175-182.
36. Yan C, Miller MI, Mori S, Winslow RL, Younes L (2006): Diffeomorphic matching of diffusion tensor images. In: Conference on Computer Vision and Pattern Recognition Workshop, CVPRW '06. pp 67-67.
37. Yang J, Shen D, Davatzikos C, Verma R (2008): Diffusion tensor image registration using tensor geometry and orientation features. MICCAI. pp 905-913.
38. Yap PT, Wu G, Zhu H, Lin W, Shen D (2009): TIMER: Tensor image morphing for elastic registration. Neuroimage 47:549-563.
39. Yap PT, Wu G, Zhu H, Lin W, Shen D (2010): F-TIMER: Fast tensor image morphing for elastic registration. IEEE Trans Med Imaging 29:1192-1203.
40. Yeo BTT, Vercauteren T, Fillard P, Pennec X, Gotland P, Ayache N, Clatz O (2008): DTI Registration with Exact Finite-Strain Differential. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on pp 700-703.
41. Zacharaki EI, Shen D, Lee SK, Davatzikos C (2008): ORBIT: a multiresolution framework for deformable registration of brain tumor images. Medical Imaging, IEEE Transactions on 27:1003-1017.
42. Zhang H, Yushkevich PA, Alexander DC, Gee JC (2006): Deformable registration of diffusion tensor MR images with explicit orientation optimization. Med Image Anal 10:764-785.
43. Ziyan U, Sabuncu MR, O'Donnell LJ, Westin CF (2007): Nonlinear registration of diffusion MR images based on fiber bundles. MICCAI. pp 351-358.