Intermediate templates guided groupwise registration of diffusion tensor images

NeuroImage

Volumn 54, Issue 2, 2011, Pages 928-939

  Jia, Hongjun ^a   Yap, Pew Thian ^a   Wu, Guorong ^a   Wang, Qian ^a,b   Shen, Dinggang ^a  

^a UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

^b Brooks Computer Science Building   (United States)

Author keywords

Diffusion tensor image; Fiber tract alignment; Groupwise registration; Image registration; Intermediate templates; Minimum spanning tree (MST)

Indexed keywords

ACCURACY; ARTICLE; CONTROLLED STUDY; DIAGNOSTIC VALUE; DIFFUSION TENSOR IMAGING; IMAGE PROCESSING; INTERMETHOD COMPARISON; NEUROIMAGING; PRIORITY JOURNAL; QUALITATIVE ANALYSIS; WHITE MATTER;

BRAIN; BRAIN MAPPING; DIFFUSION MAGNETIC RESONANCE IMAGING; HUMANS; IMAGE INTERPRETATION, COMPUTER-ASSISTED;

EID: 78649717885     PISSN: 10538119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2010.09.019     Document Type: Article

References (36)

1. Alexander D.C. Visualization and Processing of Tensor Fields 2006, 83-106. Springer, Berlin Heidelberg.
2. Alexander D.C., Gee J.C. Elastic matching of diffusion tensor images. Comput. Vision Image Understanding 1999, 77:233-250.
3. Balakrishnan V.K. Graph Theory 1997, McGraw-Hill. 1st ed.
4. Baloch S., Davatzikos C. Morphological appearance manifolds in computational anatomy: groupwise registration and morphological analysis. NeuroImage 2009, 45:S73-S85.
5. Baloch S., Verma R., Davatzikos C. An Anatomical Equivalence Class based Joint Transformation-Residual Descriptor for Morphological Analysis 2007, 594-606. Information Processing in Medical Imaging (IPMI), Netherlands.
6. Barmpoutis A., Vemuri B.C. Groupwise registration and atlas construction of 4th-order tensor fields using the R+Riemannian metric. MICCAI 2009, 640-647.
7. Basser P.J., Pierpaoli C. Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI. J. Magn. Reson. B 1996, 111:209-219.
8. Bihan D.L., Mangin J.-F., Poupon C., Clark C.A., Pappata S., Molko N., Chabriat H. Diffusion tensor imaging: concepts and applications. J. Magn. Reson. Imaging 2001, 13:534-546.
9. Dijkstra E.W. A note on two problems in connexion with graphs. Numer. Math. 1959, 1:269-271.
10. Gerig G., Gouttard S., Corouge I. Analysis of brain white matter via fiber tract modeling. Proceedings of the IEEE EMBS 2004, 4421-4424.
11. Hamm J., Davatzikos C., Verma R. Efficient large deformation registration via geodesics on a learned manifold of images. MICCAI 2009, London, UK 2009.
12. Huang H., Zhang J., Wakana S., Zhang W., Ren T., Richards L.J., Yarowsky P., Donohue P., Graham E., van Zijl P.C.M., Mori S. White and gray matter development in human fetal, newborn and pediatric brains. NeuroImage 2006, 33:27-38.
13. Jia H., Wu G., Wang Q., Shen D. ABSORB: atlas building by self-organized registration and bundling. NeuroImage 2010, 51:1057-1070.
14. Jia H., Wu G., Wang Q., Shen D. ABSORB: atlas building by self-organized registration and bundling 2010, CVPR.
15. Jiang H., van Zijl P.C., Kim J., Pearlson G.D., Mori S. DtiStudio: resource program for diffusion tensor computation and fiber bundle tracking. Comput. Methods Programs Biomed. 2006, 81:106-116.
16. Joshi S., Davis B., Jomier M., Gerig G. Unbiased diffeomorphic atlas construction for computational anatomy. NeuroImage 2004, 23(Suppl 1):S151-S160.
17. Kim M.-J., Kim M.-H., Shen D. Learning-based Deformation Estimation for Fast Non-rigid Registration. IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA), Anchorage, Alaska 2008.
18. Kruskal J.B. On the shortest spanning subtree of a graph and the traveling salesman problem. Proc. Am. Math. Soc. 1956, 7:48-50.
19. Lee A.D., Lepore N., Barysheva M., Chou Y.Y., Brun C.A., Madsen S.K., K.L.M., de Zubicaray G.I., Meredith M., Wright M.J., Toga A.W., Thompson P.M. Comparison of fractional and geodesic anisotropy in diffusion tensor images of 90 monozygotic and dizygotic twins. ISBI'2008 2008.
20. Lepore N., Brun C., Pennec X., Chou Y.-y., Lopez O.L., Aizenstein H.J., Becker J.T., Toga A.W., Thompson P.M. Mean template for tensor-based morphometry using deformation tensors. MICCAI 2007 2007.
21. Liu A.K., Marcus K.J., Fischl B., Grant P.E., Poussaint T.Y., Rivkin M.J., Davis P., Tarbell N.J., Yock T.I. Changes in cerebral cortex of children treated for medulloblastoma. Int. J. Radiat. Oncol. Biol. Phys. 2007, 68:992-998.
22. Munsell B.C., Temlyakov A., Wang S. Fast multiple shape correspondence by pre-organizing shape instances. IEEE Conference on CVPR 2009, 840-847.
23. Pierpaoli C., Jezzard P., Basser J.P., Barnett A., Chiro G.D. Diffusion tensor MR imaging of human brain. Radiology 1996, 201:637-648.
24. Rohr K., Stiehl H.S., Sprengel R., Buzug T.M., Weese J., Kuhn M.H. Landmark-based elastic registration using approximating thin-plate splines. IEEE Trans. Med. Imaging 2001, 20.
25. Shen D., Davatzikos C. HAMMER: hierarchical attribute matching mechanism for elastic registration. IEEE Trans. Med. Imaging 2002, 21:1421-1439.
26. Tang S., Fan Y., Shen D. RABBIT: rapid alignment of brains by building intermediate templates. NeuroImage 2009, 47(4):1277-1287.
27. Wahba G. Spline models for observational data. Soc. Ind. Appl. Math., Philadelphia, PA 1990.
28. Yang J., Shen D., Davatzikos C., Verma R. Diffusion tensor image registration using tensor geometry and orientation features. MICCAI'08 2008, 905-913.
29. Yap P.-T., Wu G., Zhu H., Lin W., Shen D. Fast tensor image morphing for elastic registration. MICCAI09, London, U.K 2009.
30. Yap P.-T., Wu G., Zhu H., Lin W., Shen D. TIMER: tensor image morphing for elastic registration 2009, MMBIA.
31. Yap P.-T., Wu G., Zhu H., Lin W., Shen D. TIMER: tensor image morphing for elastic registration. NeuroImage 2009, 47:549-563.
32. Yap P.-T., Wu G., Zhu H., Lin W., Shen D. F-TIMER: fast tensor image morphing for elastic registration. IEEE Trans. Med. Imaging 2010, 29(5):1192-1203.
33. Zhang H., Yushkevich P.A., Gee J.C. Registration of Diffusion Tensor Images. CVPR 2004, 842-847.
34. Zhang H., Yushkevich P.A., Alexander D.C., Gee J.C. Deformable registration of diffusion tensor MR images with explicit orientation optimization. Med. Image Anal. 2006, 10:764-785.
35. Zhang H., Avants B.B., Yushkevich P.A., Woo J.H., Wang S., McCluskey L.F., Elman L.B., Melhem E.R., Gee J.C. High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences: an example study using amyotrophic lateral sclerosis. IEEE Trans. Med. Imaging 2007, 26:1585-1597.
36. Zöllei L., Stevens A., Huber K., Kakunoori S., Fischl B. Improved tractography alignment using combined volumetric and surface registration. NeuroImage 2010, 51:206-213.