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Volumn 19, Issue 5, 2014, Pages 685-695

Active learning strategies for phenotypic profiling of high-content screens

Author keywords

Active learning; High content screening; Machine learning; Multiparametric analysis; Phenotypic discovery

Indexed keywords

ACCURACY; ARTICLE; BIOGENESIS; CLASSIFICATION; COST; HIGH CONTENT SCREEN; IMAGE ANALYSIS; LEARNING; MACHINE LEARNING; MICROSCOPY; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; RIBOSOME; RNA INTERFERENCE; SCREENING; SEMLIKI FOREST ALPHAVIRUS; TRAINING; ALGORITHM; ARTIFICIAL INTELLIGENCE; AUTOMATED PATTERN RECOGNITION; CHEMISTRY; HELA CELL LINE; HIGH THROUGHPUT SCREENING; HUMAN; PROBLEM BASED LEARNING; PROCEDURES; SEMLIKI FOREST VIRUS; STATISTICAL MODEL; UUKUNIEMI VIRUS;

EID: 84902152908     PISSN: 10870571     EISSN: 1552454X     Source Type: Journal    
DOI: 10.1177/1087057114527313     Document Type: Article
Times cited : (26)

References (30)
  • 2
    • 79953288103 scopus 로고    scopus 로고
    • Uncovering the global host cell requirements for influenza virus replication via RNAi screening
    • Stertz, S.; Shaw, M. L. Uncovering the Global Host Cell Requirements for Influenza Virus Replication via RNAi Screening. Microbes Infect. 2011, 13, 516-525
    • (2011) Microbes Infect , vol.13 , pp. 516-525
    • Stertz, S.1    Shaw, M.L.2
  • 3
    • 51649095289 scopus 로고    scopus 로고
    • RNA interference screen for human genes associated with west nile virus infection
    • Krishnan, M. N.; Ng, A.; Sukumaran, B.; et al. RNA Interference Screen for Human Genes Associated with West Nile Virus Infection. Nature 2008, 455, 242-245
    • (2008) Nature , vol.455 , pp. 242-245
    • Krishnan, M.N.1    Ng, A.2    Sukumaran, B.3
  • 4
    • 84880076973 scopus 로고    scopus 로고
    • High-content analysis of sequential events during the early phase of influenza a virus infection
    • Banerjee, I.; Yamauchi, Y.; Helenius, A.; et al. High-Content Analysis of Sequential Events during the Early Phase of Influenza A Virus Infection. PLoS One 2013, 8, e68450
    • (2013) PLoS One , vol.8
    • Banerjee, I.1    Yamauchi, Y.2    Helenius, A.3
  • 5
    • 77950387346 scopus 로고    scopus 로고
    • Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes
    • Neumann, B.; Walter, T.; Heriche, J. K.; et al. Phenotypic Profiling of the Human Genome by Time-Lapse Microscopy Reveals Cell Division Genes. Nature 2010, 464, 721-727
    • (2010) Nature , vol.464 , pp. 721-727
    • Neumann, B.1    Walter, T.2    Heriche, J.K.3
  • 6
    • 36549084622 scopus 로고    scopus 로고
    • Robust hit identification by quality assurance and multivariate data analysis of a high-content, cell-based assay
    • Durr, O.; Duval, F.; Nichols, A.; et al. Robust Hit Identification by Quality Assurance and Multivariate Data Analysis of a High-Content, Cell-Based Assay. J. Biomol. Screen. 2007, 12, 1042-1049
    • (2007) J. Biomol. Screen. , vol.12 , pp. 1042-1049
    • Durr, O.1    Duval, F.2    Nichols, A.3
  • 7
    • 76749135267 scopus 로고    scopus 로고
    • Enhanced cellclassifier: A multi-class classification tool for microscopy images
    • Misselwitz, B.; Strittmatter, G.; Periaswamy, B.; et al. Enhanced CellClassifier: A Multi-Class Classification Tool for Microscopy Images. BMC Bioinform. 2010, 11, 30
    • (2010) BMC Bioinform. , vol.11 , pp. 30
    • Misselwitz, B.1    Strittmatter, G.2    Periaswamy, B.3
  • 8
    • 80053466067 scopus 로고    scopus 로고
    • Machine learning improves the precision and robustness of high-content screens: Using nonlinear multiparametric methods to analyze screening results
    • Horvath, P.; Wild, T.; Kutay, U.; et al. Machine Learning Improves the Precision and Robustness of High-Content Screens: Using Nonlinear Multiparametric Methods to Analyze Screening Results. J. Biomol. Screen. 2011, 16, 1059-1067
    • (2011) J. Biomol. Screen. , vol.16 , pp. 1059-1067
    • Horvath, P.1    Wild, T.2    Kutay, U.3
  • 10
    • 0038738334 scopus 로고    scopus 로고
    • Pre-ribosomes on the road from the nucleolus to the cytoplasm
    • Tschochner, H.; Hurt, E. Pre-Ribosomes on the Road from the Nucleolus to the Cytoplasm. Trends Cell. Biol. 2003, 13, 255-263
    • (2003) Trends Cell. Biol. , vol.13 , pp. 255-263
    • Tschochner, H.1    Hurt, E.2
  • 11
    • 78149391411 scopus 로고    scopus 로고
    • A protein inventory of human ribosome biogenesis reveals an essential function of exportin 5 in 60s subunit export
    • Wild, T.; Horvath, P.; Wyler, E.; et al. A Protein Inventory of Human Ribosome Biogenesis Reveals an Essential Function of Exportin 5 in 60S Subunit Export. PLoS Biol. 2010, 8, e1000522
    • (2010) PLoS Biol. , vol.8
    • Wild, T.1    Horvath, P.2    Wyler, E.3
  • 13
    • 77954505687 scopus 로고    scopus 로고
    • Phosphatidylinositol 3-kinase-, actin-, and microtubule- dependent transport of semliki forest virus replication complexes from the plasma membrane to modified lysosomes
    • Spuul, P.; Balistreri, G.; Kaariainen, L.; et al., Phosphatidylinositol 3-Kinase-, Actin-, and Microtubule- Dependent Transport of Semliki Forest Virus Replication Complexes from the Plasma Membrane to Modified Lysosomes. J. Virol. 2010, 84, 7543-7557
    • (2010) J. Virol. , vol.84 , pp. 7543-7557
    • Spuul, P.1    Balistreri, G.2    Kaariainen, L.3
  • 14
    • 80053934670 scopus 로고    scopus 로고
    • Recent advances in the molecular and cellular biology of bunyaviruses
    • Walter, C. T.; Barr, J. N. Recent Advances in the Molecular and Cellular Biology of Bunyaviruses. J. Gen. Virol. 2011, 92(pt 11), 2467-2484
    • (2011) J. Gen. Virol. , vol.92 , Issue.PART.11 , pp. 2467-2484
    • Walter, C.T.1    Barr, J.N.2
  • 15
  • 16
    • 33845792555 scopus 로고    scopus 로고
    • CellProfiler: Image analysis software for identifying and quantifying cell phenotypes
    • Carpenter, A. E.; Jones, T. R.; Lamprecht, M. R.; et al. CellProfiler: Image Analysis Software for Identifying and Quantifying Cell Phenotypes. Genome Biol. 2006, 7, R100
    • (2006) Genome Biol , vol.7
    • Carpenter, A.E.1    Jones, T.R.2    Lamprecht, M.R.3
  • 17
    • 0036721668 scopus 로고    scopus 로고
    • Extraction of spots in biological images using multiscale products
    • Olivo-Marin, J.-C. Extraction of Spots in Biological Images Using Multiscale Products. Pattern Recognition 2002, 35, 1989-1996
    • (2002) Pattern Recognition , vol.35 , pp. 1989-1996
    • Olivo-Marin, J.-C.1
  • 18
    • 77949424084 scopus 로고    scopus 로고
    • Systems survey of endocytosis by multiparametric image analysis
    • Collinet, C.; Stoter, M.; Bradshaw, C. R.; et al. Systems Survey of Endocytosis by Multiparametric Image Analysis. Nature 2010, 464, 243-249
    • (2010) Nature , vol.464 , pp. 243-249
    • Collinet, C.1    Stoter, M.2    Bradshaw, C.R.3
  • 19
    • 84862188419 scopus 로고    scopus 로고
    • Differentiation and visualization of diverse cellular phenotypic responses in primary high-content screening
    • Kummel, A.; Selzer, P.; Siebert, D.; et al. Differentiation and Visualization of Diverse Cellular Phenotypic Responses in Primary High-Content Screening. J. Biomol. Screen. 2012, 17, 843-849
    • (2012) J. Biomol. Screen. , vol.17 , pp. 843-849
    • Kummel, A.1    Selzer, P.2    Siebert, D.3
  • 21
    • 0028424239 scopus 로고
    • Improving generalization with active learning
    • David, C.; Les, A.; Richard, L. Improving Generalization with Active Learning. Mach. Learn. 1994, 15, 201-221
    • (1994) Mach. Learn. , vol.15 , pp. 201-221
    • David, C.1    Les, A.2    Richard, L.3
  • 22
    • 0000710299 scopus 로고
    • Queries and concept learning
    • Dana, A. Queries and Concept Learning. Mach. Learn. 1988, 2, 319-342
    • (1988) Mach. Learn. , vol.2 , pp. 319-342
    • Dana, A.1
  • 25
    • 85124125604 scopus 로고
    • Heterogeneous uncertainty sampling for supervised learning
    • The International Machine Learning Society, New Brunswick, NJ
    • Lewis, D.; Catlett, J. Heterogeneous Uncertainty Sampling for Supervised Learning. In International Conference on Machine Learning (ICML); The International Machine Learning Society, New Brunswick, NJ, 1994; pp 148-156
    • (1994) International Conference on Machine Learning (ICML) , pp. 148-156
    • Lewis, D.1    Catlett, J.2
  • 27
    • 0002947255 scopus 로고    scopus 로고
    • A mathematical theory of communication
    • Shannon C.E.
    • Shannon, C. E. A Mathematical Theory of Communication. SIGMOBILE Mob. Comput. Commun. Rev. 2001, 5, 3-55
    • (2001) SIGMOBILE Mob. Comput. Commun. Rev. , vol.5 , pp. 3-55
  • 30
    • 84873596567 scopus 로고    scopus 로고
    • Morgan & Claypool: San Rafael, CA
    • Settles, B. Active Learning. Morgan & Claypool: San Rafael, CA, 2011.
    • (2011) Active Learning
    • Settles, B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.