메뉴 건너뛰기




Volumn 19, Issue 5, 2014, Pages 782-790

Combined analysis of phenotypic and target-based screening in assay networks

Author keywords

Chemoinformatics; Database and data management; Pharmacology: ligand binding; Phenotypic drug discovery; Receptor binding; Statistical analyses

Indexed keywords

AMYLOID PRECURSOR PROTEIN; HISTONE DEACETYLASE 3; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; KALLIKREIN 5; SUPEROXIDE DISMUTASE; ALOX15 PROTEIN, HUMAN; ARACHIDONATE 15 LIPOXYGENASE; LIPOXYGENASE INHIBITOR;

EID: 84902124342     PISSN: 10870571     EISSN: 1552454X     Source Type: Journal    
DOI: 10.1177/1087057114523068     Document Type: Article
Times cited : (12)

References (26)
  • 1
    • 67849104638 scopus 로고    scopus 로고
    • PubChem: A public information system for analyzing bioactivities of small molecules
    • Wang, Y.; Xiao, J.; Suzek, T.; et al. PubChem: A Public Information System for Analyzing Bioactivities of Small Molecules. Nucleic Acids Res. 2009, 37, W623-W633
    • (2009) Nucleic Acids Res. , vol.37
    • Wang, Y.1    Xiao, J.2    Suzek, T.3
  • 2
  • 4
    • 77950571108 scopus 로고    scopus 로고
    • New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays
    • Baell, J.; Holloway, G. New Substructure Filters for Removal of Pan Assay Interference Compounds (PAINS) from Screening Libraries and for Their Exclusion in Bioassays. J. Med. Chem. 2010, 53, 2719-2740
    • (2010) J. Med. Chem. , vol.53 , pp. 2719-2740
    • Baell, J.1    Holloway, G.2
  • 5
    • 84858033861 scopus 로고    scopus 로고
    • Utility-aware screening with clique-oriented prioritization
    • Swamidass, S.; Calhoun, B.; Bittker, J.; et al. Utility-Aware Screening with Clique-Oriented Prioritization. J. Chem. Inf. Model. 2012, 52, 29-37
    • (2012) J. Chem. Inf. Model. , vol.52 , pp. 29-37
    • Swamidass, S.1    Calhoun, B.2    Bittker, J.3
  • 6
    • 79961199012 scopus 로고    scopus 로고
    • Enhancing the rate of scaffold discovery with diversity-oriented prioritization
    • Swamidass, S.; Calhoun, B.; Bittker, J.; et al. Enhancing the Rate of Scaffold Discovery with Diversity-Oriented Prioritization. Bioinformatics 2011, 27, 2271-2278
    • (2011) Bioinformatics , vol.27 , pp. 2271-2278
    • Swamidass, S.1    Calhoun, B.2    Bittker, J.3
  • 7
    • 84929533115 scopus 로고    scopus 로고
    • Learning from our mistakes: The "unknown knowns" in fragment screening
    • Davis, B.; Erlanson, D. A. Learning from Our Mistakes: The "Unknown Knowns" in Fragment Screening. Bioorg. Med. Chem. Lett. 2013, 23, 2844-2852
    • (2013) Bioorg. Med. Chem. Lett. , vol.23 , pp. 2844-2852
    • Davis, B.1    Erlanson, D.A.2
  • 8
    • 84864972035 scopus 로고    scopus 로고
    • Automatically detecting workflows in pubchem
    • Calhoun, B.; Browning, M.; Bittker, J.; et al. Automatically Detecting Workflows in PubChem. J. Biomol. Screen. 2012, 17, 1071-1079
    • (2012) J. Biomol. Screen. , vol.17 , pp. 1071-1079
    • Calhoun, B.1    Browning, M.2    Bittker, J.3
  • 9
    • 79959471969 scopus 로고    scopus 로고
    • Bioassay ontology (BAO): A semantic description of bioassays and high-throughput screening results
    • Visser, U.; Abeyruwan, S.; Vempati, U.; et al. Bioassay Ontology (BAO): A Semantic Description of Bioassays and High-Throughput Screening Results. BMC Bioinformatics 2011, 12, 257
    • (2011) BMC Bioinformatics , vol.12 , pp. 257
    • Visser, U.1    Abeyruwan, S.2    Vempati, U.3
  • 10
    • 80054903948 scopus 로고    scopus 로고
    • Comparing bioassay response and similarity ensemble approaches to probing protein pharmacology
    • Chen, B.; McConnell, K.; Wale, N.; et al. Comparing Bioassay Response and Similarity Ensemble Approaches to Probing Protein Pharmacology. Bioinformatics 2011, 27, 3044-3049
    • (2011) Bioinformatics , vol.27 , pp. 3044-3049
    • Chen, B.1    McConnell, K.2    Wale, N.3
  • 11
    • 79960741740 scopus 로고    scopus 로고
    • The bioassay network and its implications to future therapeutic discovery
    • Zhang, J.; Lushington, G.; Huan, J. The Bioassay Network and Its Implications to Future Therapeutic Discovery. BMC Bioinformatics 2011, 12, S1
    • (2011) BMC Bioinformatics , vol.12
    • Zhang, J.1    Lushington, G.2    Huan, J.3
  • 12
    • 70349914727 scopus 로고    scopus 로고
    • Pubchem as a source of polypharmacology
    • Chen, B.; Wild, D.; Guha, R. PubChem as a Source of Polypharmacology. J. Chem. Inf. Model. 2009, 49, 2044- 2055
    • (2009) J. Chem. Inf. Model. , vol.49 , pp. 2044-2055
    • Chen, B.1    Wild, D.2    Guha, R.3
  • 13
    • 0000600049 scopus 로고    scopus 로고
    • A probabilistic justification for using TF-IDF term weighting in information retrieval
    • Hiemstra, D. A Probabilistic Justification for Using TF-IDF Term Weighting in Information Retrieval. Int. J. Digital Libraries 2000, 3, 131-139
    • (2000) Int. J. Digital Libraries , vol.3 , pp. 131-139
    • Hiemstra, D.1
  • 15
    • 0030779677 scopus 로고    scopus 로고
    • Cellular actions of beta-amyloid precursor protein and its soluble and fibrillogenic derivatives
    • Mattson, M. Cellular Actions of Beta-Amyloid Precursor Protein and Its Soluble and Fibrillogenic Derivatives. Physiol. Rev. 1997, 77, 1081-1132 (Pubitemid 27459580)
    • (1997) Physiological Reviews , vol.77 , Issue.4 , pp. 1081-1132
    • Mattson, M.P.1
  • 16
    • 33847627937 scopus 로고    scopus 로고
    • Inhibition of a[beta] production by nf-[kappa] b inhibitors
    • Paris, D.; Patel, N.; Quadros, A.; et al. Inhibition of A[beta] Production by nf-[kappa] b Inhibitors. Neurosci. Lett. 2007, 415, 11-16
    • (2007) Neurosci. Lett. , vol.415 , pp. 11-16
    • Paris, D.1    Patel, N.2    Quadros, A.3
  • 17
    • 0032084331 scopus 로고    scopus 로고
    • The NF-κb/Rel family of proteins mediates aβ-induced neurotoxicity and glial activation
    • DOI 10.1016/S0169-328X(98)00066-7, PII S0169328X98000667
    • Bales, K.; Du, Y.; Dodel, R.; et al. The NF-κb/Rel Family of Proteins Mediates Aβ-Induced Neurotoxicity and Glial Activation. Mol. Brain Res. 1998, 57, 63-72 (Pubitemid 28279561)
    • (1998) Molecular Brain Research , vol.57 , Issue.1 , pp. 63-72
    • Bales, K.R.1    Du, Y.2    Dodel, R.C.3    Yan, G.-M.4    Hamilton-Byrd, E.5    Paul, S.M.6
  • 18
    • 0037422599 scopus 로고    scopus 로고
    • Positive and negative regulation of app amyloidogenesis by sumoylation
    • Li, Y.; Wang, H.; Wang, S.; et al. Positive and Negative Regulation of APP Amyloidogenesis by Sumoylation. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 259
    • (2003) Proc. Natl. Acad. Sci. U.S.A. , vol.100 , pp. 259
    • Li, Y.1    Wang, H.2    Wang, S.3
  • 19
    • 34249733176 scopus 로고    scopus 로고
    • SUMO on the road to neurodegeneration
    • Dorval, V.; Fraser, P. SUMO on the Road to Neurodegeneration. Biochim. Biophys. Acta 2007, 1773, 694-706
    • (2007) Biochim. Biophys. Acta , vol.1773 , pp. 694-706
    • Dorval, V.1    Fraser, P.2
  • 20
    • 0025700717 scopus 로고
    • Differential inhibitory effects of various flavonoids on the activities of reverse transcriptase and cellular DNA and RNA polymerases
    • Ono, K.; Nakane, H.; Fukushima, M.; et al. Differential Inhibitory Effects of Various Flavonoids on the Activities of Reverse Transcriptase and Cellular DNA and RNA Polymerases. Eur. J. Biochem. 1990, 190, 469-476
    • (1990) Eur. J. Biochem. , vol.190 , pp. 469-476
    • Ono, K.1    Nakane, H.2    Fukushima, M.3
  • 23
    • 34047218122 scopus 로고    scopus 로고
    • HDAC inhibitors as anti-inflammatory agents
    • DOI 10.1038/sj.bjp.0707166, PII 0707166
    • Adcock, I. HDAC Inhibitors as Anti-Inflammatory Agents. Br. J. Pharmacol. 2007, 150, 829-831 (Pubitemid 46536629)
    • (2007) British Journal of Pharmacology , vol.150 , Issue.7 , pp. 829-831
    • Adcock, I.M.1
  • 24
    • 0036527775 scopus 로고    scopus 로고
    • Histone-deacetylase inhibitors: Novel drugs for the treatment of cancer
    • Johnstone, R. Histone-Deacetylase Inhibitors: Novel Drugs for the Treatment of Cancer. Nat. Rev. Drug Discov. 2002, 1, 287-299 (Pubitemid 37361445)
    • (2002) Nature Reviews Drug Discovery , vol.1 , Issue.4 , pp. 287-299
    • Johnstone, R.W.1
  • 25
    • 33947498991 scopus 로고    scopus 로고
    • A potential role for multiple tissue kallikrein serine proteases in epidermal desquamation
    • Borgono, C.; Michael, I.; Komatsu, N.; et al. A Potential Role for Multiple Tissue Kallikrein Serine Proteases in Epidermal Desquamation. J. Biol. Chem. 2007, 282, 3640-3652
    • (2007) J. Biol. Chem. , vol.282 , pp. 3640-3652
    • Borgono, C.1    Michael, I.2    Komatsu, N.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.