-
1
-
-
78651082595
-
mzML-a community standard for mass spectrometry data
-
Martens, L., Chambers, M., Sturm, M., Kessner, D. et al., mzML-a community standard for mass spectrometry data. Mol. Cell. Proteomics 2011, 10, R110 000133.
-
(2011)
Mol. Cell. Proteomics
, vol.10
-
-
Martens, L.1
Chambers, M.2
Sturm, M.3
Kessner, D.4
-
2
-
-
84859868686
-
The mzIdentML data standard for mass spectrometry-based proteomics results
-
Jones, A. R., Eisenacher, M., Mayer, G., Kohlbacher, O. et al., The mzIdentML data standard for mass spectrometry-based proteomics results. Mol. Cell. Proteomics 2012, 11, M111 014381.
-
(2012)
Mol. Cell. Proteomics
, vol.11
-
-
Jones, A.R.1
Eisenacher, M.2
Mayer, G.3
Kohlbacher, O.4
-
3
-
-
84881104272
-
The mzQuantML data standard for mass spectrometry-based quantitative studies in proteomics
-
Walzer, M., Qi, D., Mayer, G., Uszkoreit, J. et al., The mzQuantML data standard for mass spectrometry-based quantitative studies in proteomics. Mol. Cell. Proteomics 2013, 12, 2332-2340.
-
(2013)
Mol. Cell. Proteomics
, vol.12
, pp. 2332-2340
-
-
Walzer, M.1
Qi, D.2
Mayer, G.3
Uszkoreit, J.4
-
4
-
-
84859843750
-
TraML-a standard format for exchange of selected reaction monitoring transition lists
-
Deutsch, E. W., Chambers, M., Neumann, S., Levander, F. et al., TraML-a standard format for exchange of selected reaction monitoring transition lists. Mol. Cell. Proteomics 2012, 11, R111 015040.
-
(2012)
Mol. Cell. Proteomics
, vol.11
-
-
Deutsch, E.W.1
Chambers, M.2
Neumann, S.3
Levander, F.4
-
5
-
-
33846706581
-
TOPP-the OpenMS proteomics pipeline
-
Kohlbacher, O., Reinert, K., Gropl, C., Lange, E. et al., TOPP-the OpenMS proteomics pipeline. Bioinformatics 2007, 23, e191-e197.
-
(2007)
Bioinformatics
, vol.23
-
-
Kohlbacher, O.1
Reinert, K.2
Gropl, C.3
Lange, E.4
-
6
-
-
84856104821
-
MSnbase-an R/Bioconductor package for isobaric tagged mass spectrometry data visualization, processing and quantitation
-
Gatto, L., Lilley, K. S., MSnbase-an R/Bioconductor package for isobaric tagged mass spectrometry data visualization, processing and quantitation. Bioinformatics 2012, 28, 288-289.
-
(2012)
Bioinformatics
, vol.28
, pp. 288-289
-
-
Gatto, L.1
Lilley, K.S.2
-
7
-
-
79951541434
-
Lipid Data Analyzer: unattended identification and quantitation of lipids in LC-MS data
-
Hartler, J., Trotzmuller, M., Chitraju, C., Spener, F. et al., Lipid Data Analyzer: unattended identification and quantitation of lipids in LC-MS data. Bioinformatics 2011, 27, 572-577.
-
(2011)
Bioinformatics
, vol.27
, pp. 572-577
-
-
Hartler, J.1
Trotzmuller, M.2
Chitraju, C.3
Spener, F.4
-
8
-
-
84874762979
-
The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013
-
Vizcaino, J. A., Cote, R. G., Csordas, A., Dianes, J. A. et al., The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013. Nucleic Acids Res. 2013, 41, D1063-D1069.
-
(2013)
Nucleic Acids Res.
, vol.41
-
-
Vizcaino, J.A.1
Cote, R.G.2
Csordas, A.3
Dianes, J.A.4
-
9
-
-
84876560030
-
MetaboLights-an open-access general-purpose repository for metabolomics studies and associated meta-data
-
Haug, K., Salek, R. M., Conesa, P., Hastings, J. et al., MetaboLights-an open-access general-purpose repository for metabolomics studies and associated meta-data. Nucleic Acids Res. 2013, 41, D781-D786.
-
(2013)
Nucleic Acids Res.
, vol.41
-
-
Haug, K.1
Salek, R.M.2
Conesa, P.3
Hastings, J.4
-
10
-
-
77950644384
-
jmzML, an open-source Java API for mzML, the PSI standard for MS data
-
Cote, R. G., Reisinger, F., Martens, L., jmzML, an open-source Java API for mzML, the PSI standard for MS data. Proteomics 2010, 10, 1332-1335.
-
(2010)
Proteomics
, vol.10
, pp. 1332-1335
-
-
Cote, R.G.1
Reisinger, F.2
Martens, L.3
-
11
-
-
84860348402
-
jmzIdentML API: A Java interface to the mzIdentML standard for peptide and protein identification data
-
Reisinger, F., Krishna, R., Ghali, F., Rios, D. et al., jmzIdentML API: A Java interface to the mzIdentML standard for peptide and protein identification data. Proteomics 2012, 12, 790-794.
-
(2012)
Proteomics
, vol.12
, pp. 790-794
-
-
Reisinger, F.1
Krishna, R.2
Ghali, F.3
Rios, D.4
-
12
-
-
84895751176
-
The jmzQuantML programming interface and validator for the mzQuantML data standard
-
Qi, D., Krishna, R., Jones, A. The jmzQuantML programming interface and validator for the mzQuantML data standard. Proteomics 2014, 14, 685-688.
-
(2014)
Proteomics
, vol.14
, pp. 685-688
-
-
Qi, D.1
Krishna, R.2
Jones, A.3
-
13
-
-
80655129284
-
jTraML: an open source Java API for TraML, the PSI standard for sharing SRM transitions
-
Helsens, K., Brusniak, M. Y., Deutsch, E., Moritz, R. L. et al., jTraML: an open source Java API for TraML, the PSI standard for sharing SRM transitions. J. Proteome. Res. 2011, 10, 5260-5263.
-
(2011)
J. Proteome. Res.
, vol.10
, pp. 5260-5263
-
-
Helsens, K.1
Brusniak, M.Y.2
Deutsch, E.3
Moritz, R.L.4
-
14
-
-
84887033019
-
Tools (Viewer, Library and Validator) that facilitate use of the peptide and protein identification format, termed mzIdentML
-
Ghali, F., Krishna, R., Lukasse, P., Martínez-Bartolomé, S. et al., Tools (Viewer, Library and Validator) that facilitate use of the peptide and protein identification format, termed mzIdentML. Mol. Cell. Proteomics 2013, 12, 3026-3035.
-
(2013)
Mol. Cell. Proteomics
, vol.12
, pp. 3026-3035
-
-
Ghali, F.1
Krishna, R.2
Lukasse, P.3
Martínez-Bartolomé, S.4
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