Improving the quality of protein identification in non-model species. Characterization of Quercus ilex seed and Pinus radiata needle proteomes by using SEQUEST and custom databases

Journal of Proteomics

Volumn 105, Issue , 2014, Pages 85-91

  Romero Rodríguez, M Cristina ^a,e   Pascual, Jesús ^b   Valledor, Luis ^c,d   Jorrín Novo, Jesús ^a  

^a UNIVERSITY OF CÓRDOBA   (Spain)

^b UNIVERSITY OF OVIEDO   (Spain)

^c UNIVERSITY OF AVEIRO   (Portugal)

^d INSTITUTE OF MATHEMATICS   (Czech Republic)

^e UNIVERSIDAD NACIONAL DE ASUNCIÓN   (Paraguay)

Author keywords

Custom databases; ESTs; NGS; Non model species; Protein identification; SEQUEST

Indexed keywords

PROTEOME; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; NONHUMAN; OAK; PINE; PINUS RADIATA; PLANT SEED; PRIORITY JOURNAL; PROTEIN ANALYSIS; QUERCUS ILEX; REFERENCE DATABASE; RNA SEQUENCE; RNA TRANSLATION; GENETICS; METABOLISM; NUCLEOTIDE SEQUENCE; PROCEDURES; PROTEIN DATABASE; PROTEOMICS; SEQUENCE ANALYSIS;

PINUS RADIATA; QUERCUS; QUERCUS ILEX; VIRIDIPLANTAE;

AMINO ACID SEQUENCE; BASE SEQUENCE; DATABASES, PROTEIN; PINUS; PLANT PROTEINS; PROTEOME; PROTEOMICS; QUERCUS; SEEDS; SEQUENCE ANALYSIS, PROTEIN; SEQUENCE ANALYSIS, RNA;

EID: 84901846391     PISSN: 18743919     EISSN: 18767737     Source Type: Journal    
DOI: 10.1016/j.jprot.2014.01.027     Document Type: Article

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