The ecology of primate retroviruses - An assessment of 12 years of retroviral studies in the Taï national park area, Côte d'Ivoire

Virology

Volumn 460-461, Issue 1, 2014, Pages 147-153

  Gogarten, Jan F ^a,b,c   Akoua Koffi, Chantal ^d   Calvignac Spencer, Sebastien ^a   Leendertz, Siv Aina J ^a   Weiss, Sabrina ^a   Couacy Hymann, Emmanuel ^e   Koné, Inza ^f   Peeters, Martine ^g   Wittig, Roman M ^b   Boesch, Christophe ^b   Hahn, Beatrice H ^h   Leendertz, Fabian H ^a  

^a Research group Epidemiology of Highly Pathogenic Microorganisms RKI   (Germany)

^b MAX PLANCK INSTITUTE FOR EVOLUTIONARY ANTHROPOLOGY   (Germany)

^c MCGILL UNIVERSITY   (Canada)

^d Department of Anthropology and Sociology   (Côte d’Ivoire)

^e Central Laboratory for Animal Diseases   (Côte d’Ivoire)

^f UNIVERSITÉ FÉLIX HOUPHOUËT BOIGNY   (Côte d’Ivoire)

^g UNIVERSITÉ DE MONTPELLIER   (France)

^h UNIVERSITY OF PENNSYLVANIA   (United States)

Author keywords

Emerging infectious diseases; Infectious disease ecology; Simian foamy virus; Simian immunodeficiency virus; Simian T cell leukemia virus type 1; Zoonosis

Indexed keywords

ARTICLE; COTE D'IVOIRE; GENETIC SIMILARITY; MICROBIAL DIVERSITY; MOLECULAR PHYLOGENY; NATIONAL PARK; NONHUMAN; PREVALENCE; PRIMATE; PRIORITY JOURNAL; RETROVIRUS; SIMIAN FOAMY VIRUS; SIMIAN IMMUNODEFICIENCY VIRUS; SIMIAN T CELL LEUKEMIA VIRUS TYPE 1; VERTICAL TRANSMISSION; VIRUS CELL INTERACTION; VIRUS DETECTION; VIRUS LOAD; VIRUS MORPHOLOGY; VIRUS RESISTANCE; VIRUS STRAIN; VIRUS TRANSMISSION; ZOONOSIS;

EMERGING INFECTIOUS DISEASES; INFECTIOUS DISEASE ECOLOGY; SIMIAN FOAMY VIRUS; SIMIAN IMMUNODEFICIENCY VIRUS; SIMIAN T-CELL LEUKEMIA VIRUS TYPE 1; ZOONOSIS;

ANIMALS; ANIMALS, WILD; COTE D'IVOIRE; HUMANS; PHYLOGENY; PRIMATE DISEASES; PRIMATES; RETROVIRIDAE; RETROVIRIDAE INFECTIONS; ZOONOSES;

EID: 84901480107     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2014.05.012     Document Type: Review

References (64)

1. Ali M., Taylor G.P., Pitman R.J., Parker D., Rethwilm A., Cheingsong-Popov R., Weber J.N., Bieniasz P.D., Bradley J., McClure M.O. No evidence of antibody to human foamy virus in widespread human populations. AIDS Res. Hum. Retrovir. 1996, 12:1473-1483.
2. Arnold C., Matthews L.J., Nunn C.L. The 10kTrees website: a new online resource for primate phylogeny. Evolut. Anthropol. 2010, 19:114-118.
3. Ayouba A., Akoua-Koffi C., Calvignac-Spencer S., Esteban A., Locatelli S., Li H., Li Y., Hahn B.H., Delaporte E., Leendertz F.H., Peeters M. Evidence for continuing cross-species transmission of SIVsmm to humans: characterization of a new HIV-2 lineage in rural Cote d'Ivoire. AIDS 2013, 27:2488-2491.
4. Betsem E., Rua R., Tortevoye P., Froment A., Gessain A. Frequent and recent human acquisition of simian foamy viruses through apes' bites in central Africa. PLoS Pathog. 2011, 7:e1002306.
5. Blasse A., Calvignac-Spencer S., Merkel K., Goffe A.S., Boesch C., Mundry R., Leendertz F.H. Mother-offspring transmission and age-dependent accumulation of simian foamy virus in wild chimpanzees. J. Virol. 2013, 87:5193-5204.
6. Boesch C. Chimpanzees-red colobus monkeys: a predator-prey system. Anim. Behav. 1994, 47:1135-1148.
7. Boesch C., Achermann H.B. The Chimpanzees of the Taï Forest: Behavioural Ecology and Evolution 2000, Oxford University Press, New York, USA.
8. Boesch C., Boesch H. Hunting behavior of wild chimpanzees in the Tai National Park. Am. J. Phys. Anthropol. 1989, 78:547-573.
9. Calattini S., Nerrienet E., Mauclère P., Georges-Courbot M.C., Saïb A., Gessain A. Natural simian foamy virus infection in wild-caught gorillas, mandrills and drills from Cameroon and Gabon. J. Gen. Virol. 2004, 85:3313-3317.
10. Calvignac-Spencer S., Adjogoua E.V., Akoua-Koffi C., Hedemann C., Schubert G., Ellerbrok H., Leendertz S.A.J., Pauli G., Leendertz F.H. Origin of human T-lymphotropic virus type 1 in rural CÔte d'Ivoire. Emerg. Infect. Dis. 2012, 18:830-833.
11. Calvignac-Spencer S., Leendertz S.A.J., Gillespie T.R., Leendertz F.H. Wild great apes as sentinels and sources of infectious disease. Clin. Microbiol. Infect. 2012, 18:521-527.
12. Campbell G., Kuehl H., Diarrassouba A., N'Goran P.K., Boesch C. Long-term research sites as refugia for threatened and over-harvested species. Biol. Lett. 2011, 7:723-726.
13. Chapman C.A., Chapman L.J., Jacob A.L., Rothman J.M., Omeja P., Reyna-Hurtado R., Hartter J., Lawes M.J. Tropical tree community shifts: implications for wildlife conservation. Biol. Conserv. 2010, 143:366-374.
14. Compton A.A., Emerman M. Convergence and divergence in the evolution of the APOBEC3G-Vif interaction reveal ancient origins of simian immunodeficiency viruses. PLoS Pathog. 2013, 9:e1003135.
15. Courgnaud V., Formenty P., Akoua-Koffi C., Noe R., Boesch C., Delaporte E., Peeters M. Partial molecular characterization of two simian immunodeficiency viruses (SIV) from African colobids: SIVwrc from Western red colobus (Piliocolobus badius) and SIVolc from olive colobus (Procolobus verus). J. Virol. 2003, 77:744-748.
16. Gao F., Bailes E., Robertson D.L., Chen Y., Rodenburg C.M., Michael S.F., Cummins L.B., Arthur L.O., Peeters M., Shaw G.M., Sharp P.M., Hahn B.H. Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes. Nature 1999, 397:436-441.
17. Gessain A., Rua R., Betsem E., Turpin J., Mahieux R. HTLV-3/4 and simian foamy retroviruses in humans: discovery, epidemiology, cross-species transmission and molecular virology. Virology 2013, 435:187-199.
18. Gillespie T.R., Nunn C.L., Leendertz F.H. Integrative approaches to the study of primate infectious disease: implications for biodiversity conservation and global health. Am. J. Phys. Anthropol. 2008, 137:53-69.
19. Goffe A.S., Blasse A., Mundry R., Leendertz F.H., Calvignac-Spencer S. Detection of retroviral super-infection from non-invasive samples. PloS One 2012, 7:e36570.
20. Goldberg T.L., Sintasath D.M., Chapman C.A., Cameron K.M., Karesh W.B., Tang S., Wolfe N.D., Rwego I.B., Ting N., Switzer W.M. Co-infection of Ugandan red colobus (Procolobus [Piliocolobus] rufomitratus tephrosceles) with Novel, Divergent Delta-,Lenti-, and Spumaretroviruses with three novel simian retroviruses. J. Virol. 2009, 83:11318-11329.
21. Griffin R.H., Nunn C.L. Community structure and the spread of infectious disease in primate social networks. Evolut. Ecol. 2012, 26:779-800.
22. Han G.Z., Worobey M. An endogenous foamy-like viral element in the coelacanth genome. PLoS Pathog. 2012, 8:e1002790.
23. Hino S., Katamine S., Miyata H., Tsuji Y., Yamabe T., Miyamoto T. Primary Prevention of HTLV-I in Japan. J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. 1996, 13:S199-S203.
24. Junglen S., Hedemann C., Ellerbrok H., Pauli G., Boesch C., Leendertz F.H. Diversity of STLV-1 strains in wild chimpanzees (Pan troglodytes verus) from CÔte d'Ivoire. Virus Res. 2010, 150:143-147.
25. Keele B.F., Jones J.H., Terio K.A., Estes J.D., Rudicell R.S., Wilson M.L., Li Y., Learn G.H., Beasley T.M., Schumacher-Stankey J., Wroblewski E., Mosser A., Raphael J., Kamenya S., Lonsdorf E.V., Travis D.A., Mlengeya T., Kinsel M.J., Else J.G., Silvestri G., Goodall J., Sharp P.M., Shaw G.M., Pusey A.E., Hahn B.H. Increased mortality and AIDS-like immunopathology in wild chimpanzees infected with SIVcpz. Nature 2009, 460:515-519.
26. Keele B.F., Van Heuverswyn F., Li Y., Bailes E., Takehisa J., Santiago M.L., Bibollet-Ruche F., Chen Y., Wain L.V., Liegeois F., Loul S., Ngole E.M., Bienvenue Y., Delaporte E., Brookfield J.F.Y., Sharp P.M., Shaw G.M., Peeters M., Hahn B.H. Chimpanzee reservoirs of pandemic and nonpandemic HIV-1. Science 2006, 313:523-526.
27. Kirchhoff F. Immune evasion and counteraction of restriction factors by HIV-1 and other primate lentiviruses. Cell Host Microbe 2010, 8:55-67.
28. Krüger O., Affeldt E., Brackmann M., Milhahn K. Group size and composition of Colobus guereza in Kyambura Gorge, southwest Uganda, in relation to chimpanzee activity. Int. J. Primatol. 1998, 19:287-297.
29. Leendertz F.H., Boesch C., Ellerbrok H., Rietschel W., Couacy-Hymann E., Pauli G. Non-invasive testing reveals a high prevalence of simian T-lymphotropic virus type 1 antibodies in wild adult chimpanzees of the Taï National Park, CÔte d'Ivoire. J. Gen. Virol. 2004, 85:3305-3312.
30. Leendertz F.H., Boesch C., Junglen S., Pauli G., Ellerbrok H. Characterization of a new simian T-lymphotropic virus type 1 (STLV-1) in a wild living chimpanzee (Pan troglodytes verus) from Ivory Coast: evidence of a new STLV-1 group?. AIDS Res. Hum. Retrovir. 2003, 19:255-258.
31. Leendertz F.H., Zirkel F., Couacy-Hymann E., Ellerbrok H., Morozov V.A., Pauli G., Hedemann C., Formenty P., Jensen S.A., Boesch C., Junglen S. Interspecies transmission of simian foamy virus in a natural predator-prey system. J. Virol. 2008, 82:7741-7744.
32. Leendertz S.A., Locatelli S., Boesch C., Kücherer C., Formenty P., Liegeois F., Ayouba A., Peeters M., Leendertz F.H. No evidence for transmission of SIVwrc from western red colobus monkeys (Piliocolobus badius badius) to wild west african chimpanzees (Pan troglodytes verus) despite high exposure through hunting. BMC Microbiol. 2011, 11:24.
33. Leendertz S.A.J., Junglen S., Hedemann C., Goffe A., Calvignac S., Boesch C., Leendertz F.H. High prevalence, coinfection rate, and genetic diversity of retroviruses in wild red colobus monkeys (Piliocolobus badius badius) in Tai National Park, Cote d'Ivoire. J. Virol. 2010, 84:7427-7436.
34. Liégeois F., Lafay B., Formenty P., Locatelli S., Courgnaud V., Delaporte E., Peeters M. Full-length genome characterization of a novel simian immunodeficiency virus lineage (SIVolc) from olive colobus (Procolobus verus) and new SIVwrcPbb strains from western red colobus (Piliocolobus badius badius) from the Tai Forest in Ivory Coast. J. Virol. 2009, 83:428-439.
35. Liu W., Worobey M., Li Y., Keele B.F., Bibollet-Ruche F., Guo Y., Goepfert P.A., Santiago M.L., Ndjango J.B.N., Neel C., Clifford S.L., Sanz C., Kamenya S., Wilson M.L., Pusey A.E., Gross-Camp N., Boesch C., Smith V., Zamma K., Huffman M.A., Mitani J.C., Watts D.P., Peeters M., Shaw G.M., Switzer W.M., Sharp P.M., Hahn B.H. Molecular ecology and natural history of simian foamy virus infection in wild-living chimpanzees. PLoS Pathog. 2008, 4:e1000097.
36. Locatelli S., Roeder A.D., Bruford M.W., Noë R., Delaporte E., Peeters M. Lack of evidence of simian immunodeficiency virus infection among nonhuman primates in Tai National Park, Cote d'Ivoire: limitations of noninvasive methods and SIV diagnostic tools for studies of primate retroviruses. Int. J. Primatol. 2011, 32:288-307.
37. Malim M.H., Bieniasz P.D. HIV restriction factors and mechanisms of evasion. Cold Spring Harb. Perspect. Med. 2012, 2:a006940.
38. McGraw W.S., Bshary R. Association of terrestrial mangabeys (Cercocebus atys) with arboreal monkeys: experimental evidence for the effects of reduced ground predator pressure on habitat use. Int. J. Primatol. 2002, 23:311-325.
39. McGraw W.S., Zuberbühler K., Noë R. Monkeys of the Taï Forest: An African Primate Community 2007, Cambridge University Press, Cambridge, UK.
40. Mitani J.C., Watts D.P. Demographic influences on the hunting behavior of chimpanzees. Am. J. Phys. Anthropol. 1999, 109:439-454.
41. Morozov V.A., Leendertz F.H., Junglen S., Boesch C., Pauli G., Ellerbrok H. Frequent foamy virus infection in free-living chimpanzees of the Taï National Park (CÔte d'Ivoire). J. Gen. Virol. 2009, 90:500-506.
42. Mouinga-Ondémé A., Caron M., Nkoghé D., Telfer P., Marx P., Saïb A., Leroy E., Gonzalez J.P., Gessain A., Kazanji M. Cross-species transmission of simian foamy virus to humans in rural Gabon, central Africa. J. Virol. 2012, 86:1255-1260.
43. Murray S., Linial M. Foamy virus infection in primates. J. Med. Primatol. 2006, 35:225-235.
44. N'Goran P.K., Boesch C., Mundry R., N'Goran E.K., Herbinger I., Yapi F.A., Kuehl H.S. Hunting, law enforcement, and African primate conservation. Conserv. Biol. 2012, 26:565-571.
45. Noë R., Bshary R. The formation of red colobus-Diana monkey associations under predation pressure from chimpanzees. Proc. R. Soc. Lond. Ser. B: Biol. Sci. 1997, 264:253-259.
46. Prince A.M., Brotman B., Lee D.H., Andrus L., Valinsky J., Marx P. Lack of evidence for HIV type 1-related SIVcpz infection in captive and wild chimpanzees (Pan troglodytes verus) in West Africa. AIDS Res. Hum. Retrovir. 2002, 18:657-660.
47. Refisch J., Koné I. Impact of commercial hunting on monkey populations in the Taï region, CÔte d'Ivoire. Biotropica 2005, 37:136-144.
48. Samson M., Libert F., Doranz B.J., Rucker J., Liesnard C., Farber C.M., Saragosti S., Lapoumeroulie C., Cognaux J., Forceille C., Muyldermans G., Verhofstede C., Burtonboy G., Georges M., Imai T., Rana S., Yi Y., Smyth R.J., Collman R.G., Doms R.W., Vassart G., Parmentier M. Resistance to HIV-1 infection in caucasian individuals bearing mutant alleles of the CCR-5 chemokine receptor gene. Nature 1996, 382:722-725.
49. Santiago M.L., Range F., Keele B.F., Li Y., Bailes E., Bibollet-Ruche F., Fruteau C., Noë R., Peeters M., Brookfield J.F. Simian immunodeficiency virus infection in free-ranging sooty mangabeys (Cercocebus atys atys) from the Tai Forest, Cote d'Ivoire: implications for the origin of epidemic human immunodeficiency virus type 2. J. Virol. 2005, 79:12515-12527.
50. Santiago M.L., Rodenburg C.M., Kamenya S., Bibollet-Ruche F., Gao F., Bailes E., Meleth S., Soong S.J., Kilby J.M., Moldoveanu Z., Fahey B., Muller M.N., Ayouba A., Nerrienet E., McClure H.M., Heeney J.L., Pusey A.E., Collins D.A., Boesch C., Wrangham R.W., Goodall J., Sharp P.M., Shaw G.M., Hahn B.H. SIVcpz in wild chimpanzees. Science 2002, 295:465.
51. Sharp P.M., Hahn B.H. Origins of HIV and the AIDS Pandemic. Cold Spring Harb. Perspect. Med. 2011, 1:a006841.
52. Sharp P.M., Shaw G.M., Hahn B.H. Simian immunodeficiency virus infection of chimpanzees. J. Virol. 2005, 79:3891-3902.
53. Sterck E.H., Watts D.P., van Schaik C.P. The evolution of female social relationships in nonhuman primates. Behav. Ecol. Sociobiol. 1997, 41:291-309.
54. Struhsaker T. The Red Colobus Monkeys: Variation in Demography 2010, Oxford University Press, New York, USA.
55. Switzer W.M., Bhullar V., Shanmugam V., Cong M.E., Parekh B., Lerche N.W., Yee J.L., Ely J.J., Boneva R., Chapman L.E., Folks T.M., Heneine W. Frequent simian foamy virus infection in persons occupationally exposed to nonhuman primates. J. Virol. 2004, 78:2780-2789.
56. Switzer W.M., Garcia A.D., Yang C., Wright A., Kalish M.L., Folks T.M., Heneine W. Coinfection with HIV-1 and simian foamy virus in West Central Africans. J. Infect. Dis. 2008, 197:1389-1393.
57. Switzer W.M., Salemi M., Shanmugam V., Gao F., Cong M.E., Kuiken C., Bhullar V., Beer B.E., Vallet D., Gautier-Hion A., Tooye Z., Villinger F., Holmes E.C., Heneine W. Ancient co-speciation of simian foamy viruses and primates. Nature 2005, 434:376-380.
58. Teelen S. Influence of chimpanzee predation on the red colobus population at Ngogo, Kibale National Park, Uganda. Primates 2008, 49:41-49.
59. Traina-Dorge V.L., Lorino R., Gormus B.J., Metzger M., Telfer P., Richardson D., Robertson D.L., Marx P.A., Apetrei C. Molecular epidemiology of simian T-cell lymphotropic virus type 1 in wild and captive sooty mangabeys. J. Virol. 2005, 79:2541-2548.
60. Van Schaik C.P., Hooff J.V. On the ultimate causes of primate social systems. Behaviour 1983, 85:91-117.
61. Watts D.P., Potts K.B., Lwanga J.S., Mitani J.C. Diet of chimpanzees (Pan troglodytes schweinfurthii) at Ngogo, Kibale National Park, Uganda, 2. Temporal variation and fallback foods. Am. J. Primatol. 2012, 74:130-144.
62. Wolfe N.D., Escalante A.A., Karesh W.B., Kilbourn A., Spielman A., Lal A.A. Wild primate populations in emerging infectious disease research: the missing link?. Emerg. Infect. Dis. 1998, 4:149-158.
63. Wolfe N.D., Switzer W.M., Carr J.K., Bhullar V.B., Shanmugam V., Tamoufe U., Prosser A.T., Torimiro J.N., Wright A., Mpoudi-Ngole E., McCutchan F.E., Birx D.L., Folks T.M., Burke D.S., Heneine W. Naturally acquired simian retrovirus infections in central African hunters. Lancet 2004, 363:932-937.
64. Wrangham R.W. An ecological model of female-bonded primate groups. Behaviour 1980, 75:262-300.