Elastic network models capture the motions apparent within ensembles of RNA structures

RNA

Volumn 20, Issue 6, 2014, Pages 792-804

  Zimmermann, Michael T ^a,b   Jernigan, Robert L ^a  

^a IOWA STATE UNIVERSITY   (United States)

^b Mayo Clinic   (United States)

Author keywords

Coarse graining; Elastic network model; Experimental dynamics; Normal mode analysis; RNA dynamics; Structure alignment

Indexed keywords

GLOBULAR PROTEIN; HYDROGEN; RIBOSOME RNA; TRANSFER RNA;

ALGORITHM; ANISOTROPIC NETWORK MODEL; ANISOTROPY; ANTICODON; ARTICLE; ELASTIC NETWORK MODEL; GENETIC MODEL; HYDROGEN BOND; MOTION; PRINCIPAL COMPONENT ANALYSIS; PRIORITY JOURNAL; PROTEIN RNA BINDING; PROTEIN STRUCTURE; RIBOSOME; RIBOSWITCH; RNA CONFORMATION; RNA FOLDING; RNA STRUCTURE; SEQUENCE ALIGNMENT;

COARSE-GRAINING; ELASTIC NETWORK MODEL; EXPERIMENTAL DYNAMICS; NORMAL MODE ANALYSIS; RNA DYNAMICS; STRUCTURE ALIGNMENT;

ALGORITHMS; COMPUTER SIMULATION; MODELS, MOLECULAR; MOTION; PRINCIPAL COMPONENT ANALYSIS; PROTEIN CONFORMATION; PROTEINS; RIBOSOMES; RNA;

EID: 84901471787     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.041269.113     Document Type: Article

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