OTG-snpcaller: An optimized pipeline based on TMAP and GATK for SNP calling from Ion Torrent data

PLoS ONE

Volumn 9, Issue 5, 2014, Pages

  Zhu, Pengyuan ^a   He, Lingyu ^a   Li, Yaqiao ^a   Huang, Wenpan ^a   Xi, Feng ^a   Lin, Lin ^a   Zhi, Qihuan ^a   Zhang, Wenwei ^a   Tang, Y Tom ^b   Geng, Chunyu ^a   Lu, Zhiyuan ^a   Xu, Xun ^a  

^a BGI SHENZHEN   (China)

^b Complete Genomics Inc ^*  (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ALGORITHM; ARTICLE; DATA ANALYSIS SOFTWARE; EXOME; GENOTYPE; INFORMATION PROCESSING; INFORMATION RETRIEVAL; PROCESS OPTIMIZATION; SCORING SYSTEM; COMPARATIVE STUDY; COMPUTER PROGRAM; DEVICES; DNA SEQUENCE; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN; HUMAN GENOME; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PROCEDURES; SEQUENCE ALIGNMENT; SINGLE NUCLEOTIDE POLYMORPHISM;

BASE SEQUENCE; EXOME; GENOME, HUMAN; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MOLECULAR SEQUENCE DATA; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 84901283757     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0097507     Document Type: Article

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