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Volumn 9, Issue 5, 2014, Pages

Analysis of the central nervous system transcriptome of the Eastern rock lobster Sagmariasus verreauxi reveals its putative neuropeptidome

Author keywords

[No Author keywords available]

Indexed keywords

ALLATOSTATIN; BURSICON ALPHA SUBUNIT; CORAZONIN; DIURETIC HORMONE; ECLOSION; FOLLISTATIN; HORMONE PRECURSOR; MOLT INHIBITING HORMONE; MYOSTATIN; MYOSUPRESSIN; NEUROPARSIN; NEUROPEPTIDE Y; ORCOKININ; PIGMENT DISPERSING HORMONE; PROHORMONE 3; PROHORMONE 4; RED PIGMENT CONCENTRATING HORMONE; SEX HORMONE; SULFAKININ; TACHYKININ; TRANSCRIPTOME; UNCLASSIFIED DRUG; NEUROPEPTIDE;

EID: 84901277826     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0097323     Document Type: Article
Times cited : (82)

References (37)
  • 2
    • 0034694372 scopus 로고    scopus 로고
    • Shrimp endocrinology. A review
    • Huberman A (2000) Shrimp endocrinology. A review. Aquaculture 191: 191-208.
    • (2000) Aquaculture , vol.191 , pp. 191-208
    • Huberman, A.1
  • 3
    • 0026663852 scopus 로고
    • Crustacean neuropeptides: Structures, functions and comparative aspects
    • Keller R (1992) Crustacean neuropeptides: structures, functions and comparative aspects. Experientia 48: 439-448.
    • (1992) Experientia , vol.48 , pp. 439-448
    • Keller, R.1
  • 5
    • 77952544967 scopus 로고    scopus 로고
    • Bioinformatic analyses of the publicly accessible crustacean expressed sequence tags (ESTs) reveal numerous novel neuropeptide-encoding precursor proteins, including ones from members of several little studied taxa
    • Christie AE, Durkin CS, Hartline N, Ohno P, Lenz PH (2010) Bioinformatic analyses of the publicly accessible crustacean expressed sequence tags (ESTs) reveal numerous novel neuropeptide-encoding precursor proteins, including ones from members of several little studied taxa. General and Comparative Endocrinology 167: 164-178.
    • (2010) General and Comparative Endocrinology , vol.167 , pp. 164-178
    • Christie, A.E.1    Durkin, C.S.2    Hartline, N.3    Ohno, P.4    Lenz, P.H.5
  • 6
    • 84882690341 scopus 로고    scopus 로고
    • Transcriptome and peptidome characterisation of the main neuropeptides and peptidic hormones of a euphausiid: The ice krill, Euphausia crystallorophias
    • Toullec J-Y, Corre E, Bernay B, Thorne MAS Cascella K, et al. (2013) Transcriptome and peptidome characterisation of the main neuropeptides and peptidic hormones of a euphausiid: the ice krill, Euphausia crystallorophias. PLoS ONE 8: e71609.
    • (2013) PLoS ONE , vol.8
    • Toullec, J.-Y.1    Corre, E.2    Bernay, B.3    Thorne, M.A.S.4    Cascella, K.5
  • 7
    • 72749113619 scopus 로고    scopus 로고
    • Combining in silico transcriptome mining and biological mass spectrometry for neuropeptide discovery in the pacific white shrimp Litopenaeus vannamei
    • Ma M, Gard AL, Xiang F, Wang J, Davoodian N, et al. (2010) Combining in silico transcriptome mining and biological mass spectrometry for neuropeptide discovery in the pacific white shrimp Litopenaeus vannamei. Peptides 31: 27-43.
    • (2010) Peptides , vol.31 , pp. 27-43
    • Ma, M.1    Gard, A.L.2    Xiang, F.3    Wang, J.4    Davoodian, N.5
  • 8
    • 84877806767 scopus 로고    scopus 로고
    • Peptidergic signaling in Calanus finmarchicus (Crustacea, Copepoda): In silico identification of putative peptide hormones and their receptors using a de novo assembled transcriptome
    • Christie AE, Roncalli V, Wu L-S, Ganote CL, Doak T, et al. (2013) Peptidergic signaling in Calanus finmarchicus (Crustacea, Copepoda): In silico identification of putative peptide hormones and their receptors using a de novo assembled transcriptome. General and Comparative Endocrinology 187: 117-135.
    • (2013) General and Comparative Endocrinology , vol.187 , pp. 117-135
    • Christie, A.E.1    Roncalli, V.2    Wu, L.-S.3    Ganote, C.L.4    Doak, T.5
  • 9
    • 84867025899 scopus 로고    scopus 로고
    • Transcriptomic analysis of neuropeptides and peptide hormones in the barnacle Balanus amphitrite: Evidence of roles in larval settlement
    • Yan X-C, Chen Z-F, Sun J, Matsumura K, Wu RSS, et al. (2012) Transcriptomic analysis of neuropeptides and peptide hormones in the barnacle Balanus amphitrite: evidence of roles in larval settlement. PLoS ONE 7: e46513.
    • (2012) PLoS ONE , vol.7
    • Yan, X.-C.1    Chen, Z.-F.2    Sun, J.3    Matsumura, K.4    Wu, R.S.S.5
  • 10
    • 66749086310 scopus 로고    scopus 로고
    • Expanding the crustacean neuropeptidome using a multifaceted mass spectrometric approach
    • Ma M, Wang J, Chen R, Li L (2009) Expanding the crustacean neuropeptidome using a multifaceted mass spectrometric approach. Journal of Proteome Research 8: 2426-2437.
    • (2009) Journal of Proteome Research , vol.8 , pp. 2426-2437
    • Ma, M.1    Wang, J.2    Chen, R.3    Li, L.4
  • 12
    • 84864118478 scopus 로고    scopus 로고
    • Mass spectrometric elucidation of the neuropeptidome of a crustacean neuroendocrine organ
    • Hui L, Xiang F, Zhang Y, Li L (2012) Mass spectrometric elucidation of the neuropeptidome of a crustacean neuroendocrine organ. Peptides 36: 230-239.
    • (2012) Peptides , vol.36 , pp. 230-239
    • Hui, L.1    Xiang, F.2    Zhang, Y.3    Li, L.4
  • 13
    • 84873862221 scopus 로고    scopus 로고
    • Mass spectrometric characterization of the neuropeptidome of the ghost crab Ocypode ceratophthalma (Brachyura, Ocypodidae)
    • Hui L, D'Andrea BT, Jia C, Liang Z, Christie AE, et al. (2013) Mass spectrometric characterization of the neuropeptidome of the ghost crab Ocypode ceratophthalma (Brachyura, Ocypodidae). General and Comparative Endocrinology 184: 22-34.
    • (2013) General and Comparative Endocrinology , vol.184 , pp. 22-34
    • Hui, L.1    D'Andrea, B.T.2    Jia, C.3    Liang, Z.4    Christie, A.E.5
  • 14
    • 77957359170 scopus 로고    scopus 로고
    • Genomics and peptidomics of neuropeptides and protein hormones present in the parasitic wasp Nasonia vitripennis
    • Hauser F, Neupert S, Williamson M, Predel R, Tanaka Y, et al. (2010) Genomics and peptidomics of neuropeptides and protein hormones present in the parasitic wasp Nasonia vitripennis. Journal of Proteome Research 9: 5296-5310.
    • (2010) Journal of Proteome Research , vol.9 , pp. 5296-5310
    • Hauser, F.1    Neupert, S.2    Williamson, M.3    Predel, R.4    Tanaka, Y.5
  • 16
    • 77953931115 scopus 로고    scopus 로고
    • Drosophila neuropeptides in regulation of physiology and behavior
    • Nässel DR, Winther ÅME (2010) Drosophila neuropeptides in regulation of physiology and behavior. Progress in Neurobiology 92: 42-104.
    • (2010) Progress in Neurobiology , vol.92 , pp. 42-104
    • Nässel, D.R.1    Winther, Å.2
  • 17
    • 34249749353 scopus 로고    scopus 로고
    • Neuropeptide precursors in Tribolium castaneum
    • DOI 10.1016/j.peptides.2007.04.014, PII S0196978107001507
    • Amare A, Sweedler JV (2007) Neuropeptide precursors in Tribolium castaneum. Peptides 28: 1282-1291. (Pubitemid 46843393)
    • (2007) Peptides , vol.28 , Issue.6 , pp. 1282-1291
    • Amare, A.1    Sweedler, J.V.2
  • 18
    • 38049066995 scopus 로고    scopus 로고
    • Genomics, transcriptomics, and peptidomics of neuropeptides and protein hormones in the red flour beetle Tribolium castaneum
    • Li B, Predel R, Neupert S, Hauser F, Tanaka Y, et al. (2008) Genomics, transcriptomics, and peptidomics of neuropeptides and protein hormones in the red flour beetle Tribolium castaneum. Genome Research 18: 113-122.
    • (2008) Genome Research , vol.18 , pp. 113-122
    • Li, B.1    Predel, R.2    Neupert, S.3    Hauser, F.4    Tanaka, Y.5
  • 19
    • 52249104196 scopus 로고    scopus 로고
    • Molecular evolution of neuropeptides in the genus Drosophila
    • Wegener C, Gorbashov A (2008) Molecular evolution of neuropeptides in the genus Drosophila. Genome Biology 9: R131.
    • (2008) Genome Biology , vol.9
    • Wegener, C.1    Gorbashov, A.2
  • 22
    • 79951513669 scopus 로고    scopus 로고
    • Influence of codon usage bias on FGLamide-allatostatin mRNA secondary structure
    • Martínez-Pérez F, Bendena WG, Chang BSW, Tobe SS (2011) Influence of codon usage bias on FGLamide-allatostatin mRNA secondary structure. Peptides 32: 509-517.
    • (2011) Peptides , vol.32 , pp. 509-517
    • Martínez-Pérez, F.1    Bendena, W.G.2    Chang, B.S.W.3    Tobe, S.S.4
  • 23
    • 0030583718 scopus 로고    scopus 로고
    • Identification of the dipteran Leu-callatostatin peptide family: Characterisation of the prohormone gene from Calliphora vomitoria and Lucilia cuprina
    • DOI 10.1016/S0167-0115(96)00109-7, PII S0167011596001097
    • East P, Tregenza K, Duve H, Thorpe A (1996) Identification of the dipteran Leu-callatostatin peptide family: characterisation of the prohormone gene from Calliphora vomitoria and Lucilia cuprina. Regulatory Peptides 67: 1-9. (Pubitemid 26384188)
    • (1996) Regulatory Peptides , vol.67 , Issue.1 , pp. 1-9
    • East, P.1    Tregenza, K.2    Duve, H.3    Thorpe, A.4
  • 24
    • 63849303089 scopus 로고    scopus 로고
    • Identification of SYWKQCAFNAVSCFamide: A broadly conserved crustacean C-type allatostatin-like peptide with both neuromodulatory and cardioactive properties
    • Dickinson PS, Wiwatpanit T, Gabranski ER, Ackerman RJ, Stevens JS, et al. (2009) Identification of SYWKQCAFNAVSCFamide: a broadly conserved crustacean C-type allatostatin-like peptide with both neuromodulatory and cardioactive properties. Journal of Experimental Biology 212: 1140-1152.
    • (2009) Journal of Experimental Biology , vol.212 , pp. 1140-1152
    • Dickinson, P.S.1    Wiwatpanit, T.2    Gabranski, E.R.3    Ackerman, R.J.4    Stevens, J.S.5
  • 26
    • 0024406806 scopus 로고
    • Isolation and structure of corazonin, a cardioactive peptide from the American cockroach
    • Veenstra JA (1989) Isolation and structure of corazonin, a cardioactive peptide from the American cockroach. FEBS Letters 250: 231-234.
    • (1989) FEBS Letters , vol.250 , pp. 231-234
    • Veenstra, J.A.1
  • 27
    • 1642397253 scopus 로고    scopus 로고
    • Cloning of two crustacean hyperglycemic hormone isoforms in freshwater giant prawn (Macrobrachium rosenbergii): Evidence of alternative splicing
    • DOI 10.1007/s10126-003-0014-8
    • Chen S-H, Lin C-Y, Kuo CM (2004) Cloning of two crustacean hyperglycemic hormone isoforms in freshwater giant prawn (Macrobrachium rosenbergii): evidence of alternative splicing. Marine Biotechnology 6: 83-94. (Pubitemid 38390991)
    • (2004) Marine Biotechnology , vol.6 , Issue.1 , pp. 83-94
    • Chen, S.-H.1    Lin, C.-Y.2    Kuo, C.M.3
  • 28
    • 76149086826 scopus 로고    scopus 로고
    • Identification of a calcitonin-like diuretic hormone that functions as an intrinsic modulator of the American lobster, Homarus americanus, cardiac neuromuscular system
    • Christie AE, Stevens JS, Bowers MR, Chapline MC, Jensen DA, et al. (2010) Identification of a calcitonin-like diuretic hormone that functions as an intrinsic modulator of the American lobster, Homarus americanus, cardiac neuromuscular system. The Journal of experimental biology 213: 118-127.
    • (2010) The Journal of Experimental Biology , vol.213 , pp. 118-127
    • Christie, A.E.1    Stevens, J.S.2    Bowers, M.R.3    Chapline, M.C.4    Jensen, D.A.5
  • 30
    • 84871364373 scopus 로고    scopus 로고
    • Growth and biochemistry of the spiny lobster Sagmariasus verreauxi cultured at low and high density from hatch to puerulus
    • Jensen MA, Carter CG, Adams LR, Fitzgibbon QP (2013) Growth and biochemistry of the spiny lobster Sagmariasus verreauxi cultured at low and high density from hatch to puerulus. Aquaculture 376-379: 162-170.
    • (2013) Aquaculture , vol.376-379 , pp. 162-170
    • Jensen, M.A.1    Carter, C.G.2    Adams, L.R.3    Fitzgibbon, Q.P.4
  • 32
    • 24644503098 scopus 로고    scopus 로고
    • Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
    • DOI 10.1093/bioinformatics/bti610
    • Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, et al. (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21: 3674-3676. (Pubitemid 41264107)
    • (2005) Bioinformatics , vol.21 , Issue.18 , pp. 3674-3676
    • Conesa, A.1    Gotz, S.2    Garcia-Gomez, J.M.3    Terol, J.4    Talon, M.5    Robles, M.6
  • 33
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680. (Pubitemid 24354800)
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 34
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731-2739.
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 35
    • 0033625531 scopus 로고    scopus 로고
    • TeXshade: Shading and labeling of multiple sequence alignments using LaTeX2e
    • Beitz E (2000) TeXshade: shading and labeling of multiple sequence alignments using LaTeX2e. Bioinformatics 16: 135-139.
    • (2000) Bioinformatics , vol.16 , pp. 135-139
    • Beitz, E.1
  • 36
    • 80053345905 scopus 로고    scopus 로고
    • SignalP 4.0: Discriminating signal peptides from transmembrane regions
    • Petersen TN, Brunak S, von Heijne G, Nielsen H (2011) SignalP 4.0: discriminating signal peptides from transmembrane regions. Nature Methods 8: 785-786.
    • (2011) Nature Methods , vol.8 , pp. 785-786
    • Petersen, T.N.1    Brunak, S.2    Von Heijne, G.3    Nielsen, H.4


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