Fc receptors for immunoglobulins and their appearance during vertebrate evolution

PLoS ONE

Volumn 9, Issue 5, 2014, Pages

  Akula, Srinivas ^a   Mohammadamin, Sayran ^a,b   Hellman, Lars ^a  

^a UPPSALA UNIVERSITY   (Sweden)

^b SALAHADDIN UNIVERSITY   (Iraq)

Author keywords

[No Author keywords available]

Indexed keywords

FC RECEPTOR; IMMUNOGLOBULIN A RECEPTOR; IMMUNOGLOBULIN E RECEPTOR; IMMUNOGLOBULIN G RECEPTOR; IMMUNOGLOBULIN M RECEPTOR; IMMUNOGLOBULIN RECEPTOR; SECRETORY COMPONENT; UNCLASSIFIED DRUG; IMMUNOGLOBULIN;

ARTICLE; BIOINFORMATICS; FISH; GENETIC CONSERVATION; GENOME; HUMAN; IMMUNOGENETICS; MAMMALIAN GENETICS; MARSUPIAL; MOLECULAR PHYLOGENY; MONOTREMATE; MOUSE; NONHUMAN; PLACENTAL MAMMALS; PLATYPUS; RAT; VERTEBRATE; ANIMAL; CHEMISTRY; GENETICS; GENOMICS; METABOLISM; MOLECULAR EVOLUTION; PHYLOGENY; PROTEIN TERTIARY STRUCTURE;

ANIMALS; EVOLUTION, MOLECULAR; GENOMICS; HUMANS; IMMUNOGLOBULINS; PHYLOGENY; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, FC; VERTEBRATES;

EID: 84901194270     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0096903     Document Type: Article

References (68)

1. Zhao Y, Cui H, Whittington CM, Wei Z, Zhang X, et al. (2009) Ornithorhynchus anatinus (platypus) links the evolution of immunoglobulin genes in eutherian mammals and nonmammalian tetrapods. J Immunol 183: 3285-3293.
2. Zhang YA, Salinas I, Li J, Parra D, Bjork S, et al. (2010) IgT, a primitive immunoglobulin class specialized in mucosal immunity. Nat Immunol 11: 827-835.
3. Dooley H, Flajnik MF (2006) Antibody repertoire development in cartilaginous fish. Dev Comp Immunol 30: 43-56. (Pubitemid 41405787)
4. Zhang C, Du Pasquier L, Hsu E (2013) Shark IgW C Region Diversification through RNA Processing and Isotype Switching. J Immunol 191: 3410-3418.
5. Hansen JD, Landis ED, Phillips RB (2005) Discovery of a unique Ig heavy-chain isotype (IgT) in rainbow trout: Implications for a distinctive B cell developmental pathway in teleost fish. Proc Natl Acad Sci U S A 102: 6919-6924. (Pubitemid 40675417)
6. Danilova N, Bussmann J, Jekosch K, Steiner LA (2005) The immunoglobulin heavy-chain locus in zebrafish: identification and expression of a previously unknown isotype, immunoglobulin Z. Nat Immunol 6: 295-302. (Pubitemid 41724767)
7. Zhao Y, Pan-Hammarstrom Q, Yu S, Wertz N, Zhang X, et al. (2006) Identification of IgF, a hinge-region-containing Ig class, and IgD in Xenopus tropicalis. Proc Natl Acad Sci U S A 103: 12087-12092. (Pubitemid 44215815)
8. Schaerlinger B, Bascove M, Frippiat JP (2008) A new isotype of immunoglobulin heavy chain in the urodele amphibian Pleurodeles waltl predominantly expressed in larvae. Mol Immunol 45: 776-786. (Pubitemid 47498578)
9. Warr GW, Magor KE, Higgins DA (1995) IgY: clues to the origins of modern antibodies. Immunol Today 16: 392-398.
10. International Chicken Genome Sequencing C (2004) Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432: 695-716.
11. Vernersson M, Aveskogh M, Munday B, Hellman L (2002) Evidence for an early appearance of modern post-switch immunoglobulin isotypes in mammalian evolution (II); cloning of IgE, IgG1 and IgG2 from a monotreme, the duck-billed platypus, Ornithorhynchus anatinus. Eur J Immunol 32: 2145-2155. (Pubitemid 34965877)
12. Belov K, Hellman L (2003) Immunoglobulin genetics of Ornithorhynchus anatinus (platypus) and Tachyglossus aculeatus (short-beaked echidna). Comp Biochem Physiol A Mol Integr Physiol 136: 811-819. (Pubitemid 37510331)
13. Vernersson M, Aveskogh M, Hellman L (2004) Cloning of IgE from the echidna (Tachyglossus aculeatus) and a comparative analysis of epsilon chains from all three extant mammalian lineages. Dev Comp Immunol 28: 61-75. (Pubitemid 37083239)
14. Vernersson M, Belov K, Aveskogh M, Hellman L (2010) Cloning and structural analysis of two highly divergent IgA isotypes, IgA1 and IgA2 from the duck billed platypus, Ornithorhynchus anatinus. Mol Immunol 47: 785-791.
15. Aveskogh M, Pilstrom L, Hellman L (1999) Cloning and structural analysis of IgM (mu chain) and the heavy chain V region repertoire in the marsupial Monodelphis domestica. Dev Comp Immunol 23: 597-606. (Pubitemid 29509749)
16. Aveskogh M, Hellman L (1998) Evidence for an early appearance of modern post-switch isotypes in mammalian evolution; cloning of IgE, IgG and IgA from the marsupial Monodelphis domestica. Eur J Immunol 28: 2738-2750. (Pubitemid 28425232)
17. Wang X, Olp JJ, Miller RD (2009) On the genomics of immunoglobulins in the gray, short-tailed opossum Monodelphis domestica. Immunogenetics 61: 581-596.
18. Nimmerjahn F, Ravetch JV (2008) Fcgamma receptors as regulators of immune responses. Nat Rev Immunol 8: 34-47.
19. van der Poel CE, Spaapen RM, van de Winkel JG, Leusen JH (2011) Functional characteristics of the high affinity IgG receptor, FcgammaRI. J Immunol 186: 2699-2704.
20. Rivera J, Fierro NA, Olivera A, Suzuki R (2008) New insights on mast cell activation via the high affinity receptor for IgE. Adv Immunol 98: 85-120.
21. Klimovich VB (2011) IgM and its receptors: structural and functional aspects. Biochemistry (Mosc) 76: 534-549.
22. Bakema JE, van Egmond M (2011) The human immunoglobulin A Fc receptor FcalphaRI: a multifaceted regulator of mucosal immunity. Mucosal Immunol 4: 612-624.
23. Davis RS, Ehrhardt GR, Leu CM, Hirano M, Cooper MD (2005) An extended family of Fc receptor relatives. Eur J Immunol 35: 674-680. (Pubitemid 40425522)
24. Fayngerts SA, Najakshin AM, Taranin AV (2007) Species-specific evolution of the FcR family in endothermic vertebrates. Immunogenetics 59: 493-506. (Pubitemid 46684716)
25. Yamashita T, Suzuki R, Backlund PS, Yamashita Y, Yergey AL, et al. (2008) Differential dephosphorylation of the FcRgamma immunoreceptor tyrosine-based activation motif tyrosines with dissimilar potential for activating Syk. J Biol Chem 283: 28584-28594.
26. Blank U, Ra C, Miller L, White K, Metzger H, et al. (1989) Complete structure and expression in transfected cells of high affinity IgE receptor. Nature 337: 187-189. (Pubitemid 19025382)
27. Rodewald HR, Arulanandam AR, Koyasu S, Reinherz EL (1991) The high affinity Fc epsilon receptor gamma subunit (Fc epsilon RI gamma) facilitates T cell receptor expression and antigen/major histocompatibility complex-driven signaling in the absence of CD3 zeta and CD3 eta. J Biol Chem 266: 15974-15978. (Pubitemid 21907752)
28. Weissman AM, Hou D, Orloff DG, Modi WS, Seuanez H, et al. (1988) Molecular cloning and chromosomal localization of the human T-cell receptor zeta chain: distinction from the molecular CD3 complex. Proc Natl Acad Sci U S A 85: 9709-9713. (Pubitemid 19027194)
29. Lanier LL (2009) DAP10- and DAP12-associated receptors in innate immunity. Immunol Rev 227: 150-160.
30. Liang Y, Tedder TF (2001) Identification of a CD20-, FcepsilonRIbeta-, and HTm4-related gene family: sixteen new MS4A family members expressed in human and mouse. Genomics 72: 119-127. (Pubitemid 32242951)
31. Kubagawa H, Oka S, Kubagawa Y, Torii I, Takayama E, et al. (2009) Identity of the elusive IgM Fc receptor (FcmuR) in humans. J Exp Med 206: 2779-2793.
32. Davis RS (2007) Fc receptor-like molecules. Annu Rev Immunol 25: 525-560.
33. Ehrhardt GR, Cooper MD (2011) Immunoregulatory roles for fc receptor-like molecules. Curr Top Microbiol Immunol 350: 89-104.
34. Wilson TJ, Fuchs A, Colonna M (2012) Cutting edge: human FcRL4 and FcRL5 are receptors for IgA and IgG. J Immunol 188: 4741-4745.
35. Franco A, Damdinsuren B, Ise T, Dement-Brown J, Li H, et al. (2013) Human Fc receptor-like 5 binds intact IgG via mechanisms distinct from those of Fc receptors. J Immunol 190: 5739-5746.
36. Schreeder DM, Cannon JP, Wu J, Li R, Shakhmatov MA, et al. (2010) Cutting edge: FcR-like 6 is an MHC class II receptor. J Immunol 185: 23-27.
37. Tsubata T (2012) Role of inhibitory BCR co-receptors in immunity. Infect Disord Drug Targets 12: 181-190.
38. Asano M, Komiyama K (2011) Polymeric immunoglobulin receptor. J Oral Sci 53: 147-156.
39. Rombout JH, van der Tuin SJ, Yang G, Schopman N, Mroczek A, et al. (2008) Expression of the polymeric Immunoglobulin Receptor (pIgR) in mucosal tissues of common carp (Cyprinus carpio L.). Fish Shellfish Immunol 24: 620-628.
40. Feng LN, Lu DQ, Bei JX, Chen JL, Liu Y, et al. (2009) Molecular cloning and functional analysis of polymeric immunoglobulin receptor gene in orange-spotted grouper (Epinephelus coioides). Comp Biochem Physiol B Biochem Mol Biol 154: 282-289.
41. Hamuro K, Suetake H, Saha NR, Kikuchi K, Suzuki Y (2007) A teleost polymeric Ig receptor exhibiting two Ig-like domains transports tetrameric IgM into the skin. J Immunol 178: 5682-5689. (Pubitemid 46674364)
42. Parham P, Abi-Rached L, Matevosyan L, Moesta AK, Norman PJ, et al. (2010) Primate-specific regulation of natural killer cells. J Med Primatol 39: 194-212.
43. Barrow AD, Trowsdale J (2008) The extended human leukocyte receptor complex: diverse ways of modulating immune responses. Immunol Rev 224: 98-123.
44. Rajalingam R (2011) Human diversity of killer cell immunoglobulin-like receptors and disease. Korean J Hematol 46: 216-228.
45. Espeli M, Niederer HA, Traherne JA, Trowsdale J, Smith KG (2010) Genetic variation, Fcgamma receptors, KIRs and infection: the evolution of autoimmunity. Curr Opin Immunol 22: 715-722.
46. Ding Y, Xu G, Yang M, Yao M, Gao GF, et al. (2003) Crystal structure of the ectodomain of human FcalphaRI. J Biol Chem 278: 27966-27970. (Pubitemid 36899991)
47. Zucchetti I, De Santis R, Grusea S, Pontarotti P, Du Pasquier L (2009) Origin and evolution of the vertebrate leukocyte receptors: the lesson from tunicates. Immunogenetics 61: 463-481.
48. Stafford JL, Bengten E, Du Pasquier L, Miller NW, Wilson M (2007) Channel catfish leukocyte immune-type receptors contain a putative MHC class I binding site. Immunogenetics 59: 77-91. (Pubitemid 46011195)
49. Viertlboeck BC, Gobel TW (2011) The chicken leukocyte receptor cluster. Vet Immunol Immunopathol 144: 1-10.
50. Nikolaidis N, Klein J, Nei M (2005) Origin and evolution of the Ig-like domains present in mammalian leukocyte receptors: insights from chicken, frog, and fish homologues. Immunogenetics 57: 151-157. (Pubitemid 40591255)
51. Sundstrom G, Larsson TA, Brenner S, Venkatesh B, Larhammar D (2008) Evolution of the neuropeptide Y family: new genes by chromosome duplications in early vertebrates and in teleost fishes. Gen Comp Endocrinol 155: 705-716. (Pubitemid 351191913)
52. Kuroki K, Furukawa A, Maenaka K (2012) Molecular recognition of paired receptors in the immune system. Front Microbiol 3: 429.
53. Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17: 368-376.
54. Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, et al. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 61: 539-542.
55. Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, et al. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948. (Pubitemid 350162903)
56. Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30: 772-780.
57. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731-2739.
58. Guselnikov SV, Ramanayake T, Erilova AY, Mechetina LV, Najakshin AM, et al. (2008) The Xenopus FcR family demonstrates continually high diversification of paired receptors in vertebrate evolution. BMC Evol Biol 8: 148.
59. Fugmann SD (2010) The origins of the Rag genes-from transposition to V(D)J recombination. Semin Immunol 22: 10-16.
60. Viertlboeck BC, Schweinsberg S, Schmitt R, Herberg FW, Gobel TW (2009) The chicken leukocyte receptor complex encodes a family of different affinity FcY receptors. J Immunol 182: 6985-6992.
61. Viertlboeck BC, Schmitt R, Hanczaruk MA, Crooijmans RP, Groenen MA, et al. (2009) A novel activating chicken IgY FcR is related to leukocyte receptor complex (LRC) genes but is located on a chromosomal region distinct from the LRC and FcR gene clusters. J Immunol 182: 1533-1540.
62. Norderhaug IN, Johansen FE, Krajci P, Brandtzaeg P (1999) Domain deletions in the human polymeric Ig receptor disclose differences between its dimeric IgA and pentameric IgM interaction. Eur J Immunol 29: 3401-3409. (Pubitemid 29484231)
63. Wieland WH, Orzaez D, Lammers A, Parmentier HK, Verstegen MW, et al. (2004) A functional polymeric immunoglobulin receptor in chicken (Gallus gallus) indicates ancient role of secretory IgA in mucosal immunity. Biochem J 380: 669-676. (Pubitemid 38850508)
64. Tacchi L, Larragoite E, Salinas I (2013) Discovery of J Chain in African Lungfish (Protopterus dolloi, Sarcopterygii) Using High Throughput Transcriptome Sequencing: Implications in Mucosal Immunity. PLoS One 8: e70650.
65. Shimizu Y, Honda S, Yotsumoto K, Tahara-Hanaoka S, Eyre HJ, et al. (2001) Fc(alpha)/mu receptor is a single gene-family member closely related to polymeric immunoglobulin receptor encoded on Chromosome 1. Immunogenetics 53: 709-711. (Pubitemid 33152532)
66. Purzel J, Schmitt R, Viertlboeck BC, Gobel TW (2009) Chicken IgY binds its receptor at the CH3/CH4 interface similarly as the human IgA: Fc alpha RI interaction. J Immunol 183: 4554-4559.
67. Stafford JL, Wilson M, Nayak D, Quiniou SM, Clem LW, et al. (2006) Identification and characterization of a FcR homolog in an ectothermic vertebrate, the channel catfish (Ictalurus punctatus). J Immunol 177: 2505-2517. (Pubitemid 44201010)
68. Brown D, Trowsdale J, Allen R (2004) The LILR family: modulators of innate and adaptive immune pathways in health and disease. Tissue Antigens 64: 215-225. (Pubitemid 39120446)