MicroRNAs expression and their regulatory networks during mesenchymal stem cells differentiation toward osteoblasts

International Journal of Biological Macromolecules

Volumn 66, Issue , 2014, Pages 194-202

  Vimalraj, S ^a   Selvamurugan, N ^a  

^a SRM INSTITUTE OF SCIENCE AND TECHNOLOGY   (India)

Author keywords

Mesenchymal stem cells; MicroRNAs; MiR 15b; Osteoblasts; ToppCluster

Indexed keywords

JANUS KINASE; MICRORNA; MICRORNA 106A; MICRORNA 130A; MICRORNA 130B; MICRORNA 148A; MICRORNA 15B; MICRORNA 24; MICRORNA 30C; MICRORNA 424; MICRORNA 99A; MICRORNA LET 7I; MITOGEN ACTIVATED PROTEIN KINASE; PROTEIN P53; STAT PROTEIN; UBIQUITIN; UNCLASSIFIED DRUG;

ADIPOGENESIS; ARTICLE; BIOINFORMATICS; CELL DIFFERENTIATION; CELL SPECIFICITY; CONTROLLED STUDY; FOCAL ADHESION; GAP JUNCTION; GENE EXPRESSION; GENE FUNCTION; GENE REGULATORY NETWORK; GENE TARGETING; GENETIC ANALYSIS; GROWTH REGULATION; HUMAN; HUMAN CELL; MESENCHYMAL STEM CELL; MUSCLE DEVELOPMENT; OSTEOBLAST; PROTEIN DEGRADATION; SIGNAL TRANSDUCTION; ADULT; BONE DEVELOPMENT; CELL LINE; FEMALE; GENETICS; MESENCHYMAL STROMA CELL; PHYSIOLOGY;

ADIPOGENESIS; ADULT; CELL LINE; FEMALE; GENE EXPRESSION; GENE REGULATORY NETWORKS; HUMANS; MESENCHYMAL STROMAL CELLS; MICRORNAS; MUSCLE DEVELOPMENT; OSTEOBLASTS; OSTEOGENESIS;

EID: 84900367040     PISSN: 01418130     EISSN: 18790003     Source Type: Journal    
DOI: 10.1016/j.ijbiomac.2014.02.030     Document Type: Article

References (53)

1. Selvamurugan N., Jefcoat S.C., Kwok S., Kowalewski R., Tamasi J.A., Partridge N.C. J. Cell. Biochem. 2006, 99:545-557.
2. Selvamurugan N., Kwok S., Vasilov A., Jefcoat S.C., Partridge N.C. J. Orthop. Res. 2007, 25:1213-1220.
3. Lian J.B., Stein G.S., van Wijnen A.J., Stein J.L., Hassan M.Q., Gaur T., Zhang Y. Nat. Rev. Endocrinol. 2012, 8:212-227.
4. Vimalraj S., Selvamurugan N. Curr. Issues Mol. Biol. 2012, 15:7-18.
5. Moorthi A., Vimalraj S., Avani C., He Z., Partridge N.C., Selvamurugan N. Int. J. Biol. Macromol. 2013, 56:181-185.
6. Selbach M., Schwanhausser B., Thierfelder N., Fang Z., Khanin R., Rajewsky N. Nature 2008, 455:58-63.
7. Bushati N., Cohen S.M. Annu. Rev. Cell Dev. Biol. 2007, 23:175-205.
8. Gangaraju V.K., Lin J. Nat. Rev. Mol. Cell Biol. 2009, 10:116-125.
9. Vimalraj S., Miranda P.J., Ramyakrishna B., Selvamurugan N. Dis. Markers 2013, 35:369-387.
10. Goff L.A., Boucher S., Ricupero C.L., Fenstermacher S., Swerdel M., Chase L.G., Adams C.C., Chesnut J., Lakshmipathy U., Hart R.P. Exp. Hematol. 2008, 36:1354-1369.
11. Guo L., Zhao R.C., Wu Y. Exp. Hematol. 2011, 39:608-616.
12. Gao J., Yang T., Han J., Yan K., Qiu X., Zhou Y., Fan Q., Ma B. J. Cell. Biochem. 2011, 112:1844-1856.
13. Li Z., Hassan M.Q., Volinia S., van Wijnen A.J., Stein J.I., Croce C.M., Lian J.B., Stein G.S. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:13906-13911.
14. Pittenger M.F., Mackay A.M., Beck S.C., Jaiswal R.K., Douglas R., Mosca J.D., Moorman M.A., Simonetti D.W., Craig S., Marshak D.R. Science 1999, 284:143-147.
15. Nefussi J.R., Boy-Lefevre M.L., Boulekbache H., Forest N. Differentiation 1985, 29:160.
16. Eskildsen T., Taipaleenmäki H., Stenvang J., Abdallah B.M., Ditzel N., Nossent A.Y., Bak M., Kauppinen S., Kassem M. Proc. Natl. Acad. Sci. U. S. A. 2011, 108:6139-6144.
17. Hartig S.M. Curr. Protoc. Mol. Biol. 2013, 10.1002/0471142727.mb1415s102.
18. Papadopoulos G.L., Alexiou P., Maragkakis M., Reczko M., Hatzigeorgiou A.G. Bioinformatics 2009, 25:1991-1993.
19. Kaimal V., Bardes E.E., Tabar S.C., Jegga A.G., Aronow B.J. Nucleic Acids Res. 2010, 38:W96-W102. (Web Server issue).
20. Kwok S., Partridge N.C., Srinivasan N., Nair S.V., Selvamurugan N. J. Cell. Biochem. 2009, 106:161-169.
21. Liu D.D., Zhang J.C., Zhang Q., Wang S.X., Yang M.S. J. Cell. Biochem. 2013, 114:1105-1114.
22. Chen G., Deng C., Li Y.P. Int. J. Biol. Sci. 2012, 8:272-288.
23. Inose H., Ochi H., Kimura A., Fujita K., Xu R., Sato S., Iwasaki M., Sunamura S., Takeuchi Y., Fukumoto S., Saito K., Nakamura T., Siomi H., Ito H., Arai Y., Shinomiya K., Takeda S. Proc. Natl. Acad. Sci. U. S. A. 2009, 106:20794-20799.
24. Trohatou O., Zagoura D., Bitsika V., Pappa K.I., Antsaklis A., Anagnou N.P., Roubelakis M.G. Stem Cells Transl. Med. 2013, 10.5966/sctm. 2013-0081.
25. Yang N., Wang G., Hu C., Shi Y., Liao L., Shi S., Cai Y., Cheng S., Wang X., Liu Y., Tang L., Ding Y., Jin Y. J. Bone Miner. Res. 2013, 28:559-573.
26. Guo C.J., Pan Q., Li D.G., Sun H., Liu B.W. J. Hepatol. 2009, 50:766-778.
27. Nishi H., Ono K., Iwanaga Y., Horie T., Nagao K., Takemura G., Kinoshita M., Kuwabara Y., Mori R.T., Hasegawa K., Kita T., Kimura T. J. Biol. Chem. 2010, 285:4920-4930.
28. Mujahid S., Nielsen H.C., Volpe M.V. PLOS ONE 2013, 8:e55911.
29. Mestdagh P., Lefever S., Pattyn F., Ridzon D., Fredlund E., Fieuw A., Ongenaert M., Vermeulen J., De Paepe A., Wong L., Speleman F., Chen C., Vandesompele J. Nucleic Acids Res. 2011, 39:e136.
30. Chamorro-Jorganes A., Araldi E., Penalva L.O., Sandhu D., Fernández-Hernando C., Suárez Y. Arterioscler. Thromb. Vasc. Biol. 2011, 31:2595-2606.
31. Xu J., Li Y., Wang F., Wang X., Cheng B., Ye F., Xie X., Zhou C., Lu W. Oncogene 2012, 10.1038/onc.2012.121.
32. Faraoni I., Laterza S., Ardiri D., Ciardi C., Fazi F., Lo-Coco F. J. Hematol. Oncol. 2012, 8:5-26.
33. Jiang Y., Wu Y., Greenlee A.R., Wu J., Han Z., Li X., Zhao Y. Toxicol. Sci. 2011, 119:50-60.
34. Hummel R., Watson D.I., Smith C., Kist J., Michael M.Z., Haier J., Hussey D.J. J. Gastrointest. Surg. 2011, 15:429-438.
35. Wang Z., Liu M., Zhu H., Zhang W., He S., Hu C., Quan L., Bai J., Xu N. Mol. Carcinog. 2012, 10.1002/mc.21899.
36. Satoh M., Minami Y., Takahashi Y., Tabuchi T., Nakamura M. J. Card. Fail. 2011, 17:923-929.
37. Wang H., Peng W., Ouyang X., Dai Y. Ren. Fail. 2012, 34:685-690.
38. Liu A.M., Yao T.J., Wang W., Wong K.F., Lee N.P., Fan S.T., Poon R.T., Gao C., Luk J.M. BMJ Open 2012, 8(2):e000825.
39. Tanic M., Yanowsky K., Rodriguez-Antona C., Andrés R., Márquez-Rodas I., Osorio A., Benitez J., Martinez-Delgado B. PLoS ONE 2012, 7:e38847.
40. Yang L., Li N., Wang H., Jia X., Wang H., Luo J. Oncol. Rep. 2012, 28:592-600.
41. Raggatt L.J., Qin L., Tamasi J., Jefcoat S.C., Shimizu E., Selvamurugan N., Liew F.Y., Bevelock L., Feyen J.H., Partridge N.C. J. Biol. Chem. 2008, 283:6790-6798.
42. Lee K.S., Kim H.J., Li Q.L., Chi X.Z., Ueta C., Komori T., Wozney J.M., Kim E.G., Choi J.Y., Ryoo H.M., Bae S.C. Mol. Cell. Biol. 2000, 20:8783-8792.
43. Gersbach C.A., Byers B.A., Pavlath G.K., García A.J. Exp. Cell Res. 2004, 300:406-417.
44. Jeon M.J., Kim J.A., Kwon S.H., Kim S.W., Park K.S., Park S.W., Kim S.Y., Shin C.S. J. Biol. Chem. 2003, 278:23270-23277.
45. Lian J.B., Stein G.S., Javed A., van Wijnen A.J., Stein J.L., Montecino M., Hassan M.Q., Gaur T., Lengner C.J., Young D.W. Rev. Endocr. Metab. Disord. 2006, 7:1-16.
46. Ali A.A., Weinstein R.S., Stewart S.A., Parfitt A.M., Manolagas S.C., Jilka R.L. Endocrinology 2005, 146:1226-1235.
47. Park J.K., Lee E.M., Kim A.Y., Lee E.J., Min C.W., Kang K.K., Lee M.M., Jeong K.S. Int. J. Exp. Pathol. 2012, 93:332-340.
48. Zhang J.F., Fu W.M., He M.L., Xie W.D., Lv Q., Wan G., Li G., Wang H., Lu G., Hu X., Jiang S., Li J.N., Lin M.C., Zhang Y.O., Kung H.F. RNA Biol. 2011, 8:829-838.
49. Neubauer M., Fischbach C., Bauer-Kreisel P., Lieb E., Hacker M., Tessmar J., Schulz M.B., Goepferich A., Blunk T. FEBS Lett. 2004, 577:277-283.
50. Handorf A.M., Li W.J. PLoS ONE 2011, 6:e22887.
51. Lai W.T., Krishnappa V., Phinney D.G. Stem Cells 2011, 29:1102-1111.
52. Kakudo N., Shimotsuma A., Kusumoto K.K. Biochem. Biophys. Res. Commun. 2007, 359:239-244.
53. Marie P.J., Debiais F., Haÿ E. Histol. Histopathol. 2002, 17:877-885.