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Volumn 29, Issue 24, 2013, Pages 3222-3224

BlastGraph: A comparative genomics tool based on BLAST and graph algorithms

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; BIOLOGY; CLUSTER ANALYSIS; COMPUTER GRAPHICS; GENOMICS; PHYLOGENY; PROCEDURES; SEQUENCE ALIGNMENT; SOFTWARE;

EID: 84900366005     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btt553     Document Type: Article
Times cited : (7)

References (10)
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    • Altschul, S.F. et al. (1990) Basic local alignment search tool. J. Mol. Biol., 215, 403-410.
    • (1990) J. Mol. Biol. , vol.215 , pp. 403-410
    • Altschul, S.F.1
  • 2
    • 37849023306 scopus 로고    scopus 로고
    • Assessing performance of orthology detection strategies applied to eukaryotic genomes
    • Chen, F. et al. (2007) Assessing performance of orthology detection strategies applied to eukaryotic genomes. PloS One, 2, e383.
    • (2007) PloS One , vol.2 , pp. e383
    • Chen, F.1
  • 3
    • 0036529479 scopus 로고    scopus 로고
    • An efficient algorithm for large-scale detection of protein families
    • Enright, A.J. et al. (2002) An efficient algorithm for large-scale detection of protein families. Nucleic Acids Res., 30, 1575-1584.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1575-1584
    • Enright, A.J.1
  • 4
    • 51749088608 scopus 로고    scopus 로고
    • BioJava: An open-source framework for bioinformatics
    • Holland, R.C.G. et al. (2008) BioJava: an open-source framework for bioinformatics. Bioinformatics, 24, 2096-2097.
    • (2008) Bioinformatics , vol.24 , pp. 2096-2097
    • Holland, R.C.G.1
  • 5
    • 0036226603 scopus 로고    scopus 로고
    • BLAT - The BLAST-like alignment tool
    • Kent, W.J. (2002) BLAT - the BLAST-like alignment tool. Genome Res., 12, 656-664.
    • (2002) Genome Res. , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 6
    • 0141519279 scopus 로고    scopus 로고
    • OrthoMCL: Identification of ortholog groups for eukaryotic genomes
    • Li, L. et al. (2003) OrthoMCL: identification of ortholog groups for eukaryotic genomes. Genome Res., 13, 2178-2189.
    • (2003) Genome Res. , vol.13 , pp. 2178-2189
    • Li, L.1
  • 7
    • 33745634395 scopus 로고    scopus 로고
    • Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
    • Li, W. et al. (2006) Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics, 22, 1658-1659.
    • (2006) Bioinformatics , vol.22 , pp. 1658-1659
    • Li, W.1
  • 9
    • 0032900532 scopus 로고    scopus 로고
    • Genome phylogeny based on gene content
    • Snel, B. et al. (1999) Genome phylogeny based on gene content. Nat. Genet., 21, 108-110.
    • (1999) Nat. Genet. , vol.21 , pp. 108-110
    • Snel, B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.