BioJava: An open-source framework for bioinformatics

Bioinformatics

Volumn 24, Issue 18, 2008, Pages 2096-2097

  Holland, R C G ^a   Down, T A ^b   Pocock, M ^c   Prlić, Andreas ^d   Huen, D ^e   James, K ^d   Foisy, S ^f   Drager A ^g   Yates, A ^a   Heuer, M ^h   Schreiber, M J ⁱ  

^a EUROPEAN BIOINFORMATICS INSTITUTE   (United Kingdom)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^c NEWCASTLE UNIVERSITY   (United Kingdom)

^d WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^e UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^f MONTREAL HEART INSTITUTE   (Canada)

^g UNIVERSITY OF TÜBINGEN   (Germany)

^h Harbinger Partners Inc ^*  (United States)

ⁱ NOVARTIS INSTITUTE FOR TROPICAL DISEASES   (Singapore)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; BIOINFORMATICS; COMPUTER LANGUAGE; COMPUTER PROGRAM; INFORMATION PROCESSING; PRIORITY JOURNAL; PROTEIN STRUCTURE; SEQUENCE ANALYSIS; STATISTICAL ANALYSIS;

EID: 51749088608     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btn397     Document Type: Article

References (8)

1. Altschul,S.F. et al. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
2. Berman,H.M. et al. (2000) The Protein Data Bank. Nucleic Acids Res., 28, 235-242.
3. Pocock,M. (2003) Computational analysis of genomes. PhD thesia, University of Cambridge, Cambridge, UK.
4. Pocock,M. et al. (2000) BioJava: Open source components for bioinformatics. ACM SIGBIO Newsl., 20, 10-12.
5. Ewing,B. et al. (1998) Base-calling of automated sequencer traces using phred. Genome Res., 8, 175-185.
6. Maddison,D.R. et al. (1997) NEXUS: An extensible file format for systematic information. Syst. Biol., 46, 590-621.
7. Mangalam,H. (2002) The Bio* toolkits - a brief overview. Brief. Bioinform., 3, 396-302.
8. Stajich,J.E. et al. (2002) The Bioperl toolkit: Perl modules for the life sciences. Genome Res., 12, 1611-1618.