Comparative engineering of Escherichia coli for cellobiose utilization: Hydrolysis versus phosphorolysis

Metabolic Engineering

Volumn 24, Issue , 2014, Pages 9-17

  Shin, Hyun Dong ^a   Wu, Jianrong ^a   Chen, Rachel ^a  

^a Georgia Institute of Technology   (United States)

Author keywords

Biomass technology; Cellobiose phosphorolysis; Cellulose bioconversion; E. coli

Indexed keywords

CELLS; CYTOLOGY; ESCHERICHIA COLI; HYDROLYSIS; METABOLISM; RECOMBINANT PROTEINS;

BIOMASS TECHNOLOGIES; CELLULOSIC MATERIAL; E. COLI; ENERGY METABOLISM; MICROBIAL BIOCATALYSTS; PHOSPHOROLYSIS; RECOMBINANT PROTEIN PRODUCTIONS; XYLOSE UTILIZATIONS;

METABOLIC ENGINEERING;

ADENOSINE TRIPHOSPHATE; CELLOBIOSE; GLUCOSE; RECOMBINANT PROTEIN; XYLOSE;

ARTICLE; BIOFUEL PRODUCTION; BIOMASS; CELL METABOLISM; CONTROLLED STUDY; ENERGY METABOLISM; ENERGY TRANSFER; ENZYME PHOSPHORYLATION; ESCHERICHIA COLI; FERMENTATION; GLYCOLYSIS; HYDROLYSIS; INTERMETHOD COMPARISON; LYSIS; METABOLIC ENGINEERING; MOLECULE; NONHUMAN; PHOSPHOROLYSIS; PRIORITY JOURNAL; AEROBIC METABOLISM; COMPARATIVE STUDY; GENETICS; METABOLISM;

AEROBIOSIS; CELLOBIOSE; ESCHERICHIA COLI; METABOLIC ENGINEERING; RECOMBINANT PROTEINS; XYLOSE;

EID: 84899801675     PISSN: 10967176     EISSN: 10967184     Source Type: Journal    
DOI: 10.1016/j.ymben.2014.04.002     Document Type: Article

References (29)

1. Adachi N., Takahashi C., Ono-Murota N., Yamaguchi R., Tanaka T., Kondo A. Direct l-lysine production from cellobiose by Corynebacterium glutamicum displaying beta-glucosidase on its cell surface. Appl. Microbiol. Biotechnol. 2013, 97(16):7165-7172.
2. Agrawal M., Wang Y., Chen R.R. Engineering efficient xylose metabolism into an acetic acid-tolerant Zymomonas mobilis strain by introducing adaptation-induced mutations. Biotechnol. Lett. 2012, 34(12):1825-1832.
3. Chen P., Fu X., Ng T.B., Ye X.-Y. Expression of a secretory β-glucosidase from Trichoderma reesei in Pichia pastoris and its characterization. Biotechnol. Lett. 2011, 33(12):2475-2479.
4. Galazka J.M., Tian C., Beeson W.T., Martinez B., Glass N.L., Cate J.H.D. Cellodextrin transport in yeast for improved biofuel production. Science 2010, 330:84-86.
5. Guo Z.P., Zhang L., Ding Z.Y., Gu Z.H., Shi G.Y. Development of an industrial ethanol-producing yeast strain for efficient utilization of cellobiose. Enzyme Microb. Technol. 2011, 49:105-112.
6. Ha S.J., Galazka J.M., Kim S.R., Choi J.H., Yang X., Seo J.H., Glass N.L., Cate J.H., Jin Y.S. Engineered Saccharomyces cerevisiae capable of simultaneous cellobiose and xylose fermentation. Proc. Natl. Acad. Sci. USA 2011, 108:504-509.
7. Ha S.J., Galazka J.M., Kim S.R., Oh E.J., Kordic V., Kim H., Jin Y.S., Cate J.H.D. Energetic benefits and rapid cellubiose fermentation by saccharomyces cerevisiae expressing cellobiose phosphorylase and mutant cellodextrin transporters. Metab. Eng. 2013, 15:134-148.
8. Jewett M.C., Miller M.L., Chen Y., Swartz J.R. Continued protein synthesis at low [ATP] and [GTP] enables cell adaptation during energy limitation. J. Bacteriol. 2009, 191(3):1083-1091.
9. Karnaouri A., Topakas E., Paschos T., Taouki I., Christakopoulos P. Cloning, expression and characterization of an ethanol tolerant GH3 β-glucosidase from Myceliophthora thermophila. PeerJ 2013, 1:e46.
10. Li S., Du J., Sun J., Galazka J.M., Glass N.L., Cate J.H.D., Yang X., Zhao H. Overcoming glucose repression in mixed sugar fermentation by co-expressing a cellobiose transporter and a β-glucosidase in Saccharomyces cerevisiae. Mol. Biosyst. 2010, 6:2129-2132.
11. Lynd L.R., Weimer P.J., van Zyl W.H., Pretorius I.S. Microbial cellulose utilization: fundamentals and biotechnology. Microbiol. Mol. Biol. Rev. 2002, 66(3):506-577.
12. Machida M., Ohtsuki I., Fukui S., Yamashita I. Nucleotide sequences of Saccharomycopsis fibuligera genes for extracellular beta-glucosidases as expressed in Saccharomyces cerevisiae. Appl. Environ. Microbiol. 1988, 54(12):3147-3155.
13. Mills T.Y., Sandoval N.R., Gill.R.T. Cellulosic hydrolysate toxicity and tolerance mechanisms in Escherichia coli. Biotechnol. Biofuels 2009, 2(26). 10.1186/1754-6834-2-26.
14. Moniruzzaman M., Lai X., York S.W., Ingram L.O. Isolation and molecular characterization of high- performance cellobiose-fermenting spontaneous mutants of ethanologenic Escherichia coli KO11 containing the Klebsiella oxytoca casAB operon. Appl. Environ. Microbiol. 1997, 63(12):4633-4637.
15. Muñoz-Gutiérrez I., Oropeza R., Gosset G., Martinez A. Cell surface display of a β-glucosidase employing the type V secretion system on ethanologenic Escherichia coli for the fermentation of cellobiose to ethanol. J. Ind. Microbiol. Biotechnol. 2012, 39:1141-1152.
16. Nakamura N., Yamada R., Kitahara S., Tanaka T., Fukuda H., Kondo A. Effective xylose/cellobiose co-fermentation and ethanol production by xylose-assimilating S. cerevisiae via expression of β-glucosidase on its cell surface. Enzyme Microb. Technol. 2008, 43:233-236.
17. Rutter C., Mao Z., Chen R. Periplasmic expression of a Saccharophagus cellodextrinase enables E. coli to ferment cellodextrin. Appl. Microbiol. Biotechnol. 2013, 97(18):8129-8138.
18. Rutter C., Chen R. Improved cellobiose utilization in E. coli by including both hydrolysis and phosphrolysis mechanisms. Biotechnol. Lett. 2014, 36:301-307.
19. Sadie C.J., Rose S.H., den Haan.R., van Zyl W.H. Co-expression of a cellobiose phosphorylase and lactose permease enables intracellular cellobiose utilisation by Saccharomyces cerevisiae. Appl. Microbiol. Biotechnol. 2011, 90:1373-1380.
20. Molecular Cloning: A Laboratory Manual 2001, CSHL press, Cold Spring Harbour, New York. J. Sambrook, D.W. Russell (Eds.).
21. Sandoval N.R., Mills T.Y., Zhang M., Gill.R.T. Elucidating acetate tolerance in E. coli using a genome-wide approach. Metab. Eng. 2011, 13(2):214-224.
22. Sekar R., Shin H.D., Chen R. Engineering E. coli cells for cellobiose assimilation through a phosphorolytic mechanism. Appl. Environ. Microbiol. 2012, 78(5):1611-1614.
23. Shin H.D., McClendon S., Vo T., Chen R. An E. coli binary culture engineered for direct fermentation of hemicellulose to biofuel. Appl. Environ. Microbiol. 2010, 76(24):8150-8159.
24. Skory C.D., Freer S.N., Bothast R.J. Expression and secretion of the Candida wickerhamii extracellular β-glucosidase gene, bglB, in Saccharomyces cerevisiae. Curr. Genet. 1996, 30(5):417-422.
25. Soma Y., Inokuma K., Tanaka T., Ogino C., Kondo A., Okamoto M., Hanai T. Direct isopropanol production from cellobiose by engineered Escherichia coli using a synthetic pathway and a cell surface display system. J. Biosci. Bioeng. 2012, 114:80-85.
26. Tanaka T., Kawabata H., Ogino C., Kondo A. Creation of a cellooligosaccharide-assimilating Escherichia coli strain by displaying active beta-glucosidase on the cell surface via a novel anchor protein. Appl. Environ. Microbiol. 2011, 77:6265-6270.
27. Takahashi C.M., Takahashi D.F., Carvalhal M.L., Alterthum F. Effects of acetate on the growth and fermentation performance of Escherichia coli KO11. Appl. Biochem. Biotechnol. 1999, 81(3):193-203.
28. van Rooyena R., Hahn-Hägerdala B., La Grangea D.C., van Zyl W.H. Construction of cellobiose-growing and fermenting Saccharomyces cerevisiae strains. J. Biotechnol. 2005, 120(3):284-295.
29. York S.W., Ingram L.O. Ethanol production by recombinant Escherichia coli KO11 using crude yeast autolysate as a nutrient supplement. Biotechnol. Lett. 1996, 18:683-688.