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Volumn 52, Issue 5, 2014, Pages 1453-1458

Development and validation of an in-house database for matrix-assisted laser desorption ionization-time of flight mass spectrometry-based yeast identification using a fast protein extraction procedure

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CANDIDA; CRYPTOCOCCUS; DATA BASE; EXOPHIALA; FUNGAL STRAIN; FUNGUS IDENTIFICATION; FUNGUS ISOLATION; GEOTRICHUM; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; MYCOSIS; NONHUMAN; PHENOTYPE; PICHIA; PRIORITY JOURNAL; RETROSPECTIVE STUDY; RHODOTORULA; SACCHAROMYCES; TRICHOSPORON; VALIDATION STUDY; CHEMISTRY; FACTUAL DATABASE; FRACTIONATION; ISOLATION AND PURIFICATION; MASS SPECTROMETRY; PROCEDURES; PROSPECTIVE STUDY; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; YEAST;

EID: 84899508891     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.03355-13     Document Type: Article
Times cited : (60)

References (36)
  • 1
    • 77957809580 scopus 로고    scopus 로고
    • Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of clinically important yeast species
    • Stevenson LG, Drake SK, Shea YR, Zelazny AM, Murray PR. 2010. Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of clinically important yeast species. J. Clin. Microbiol. 48:3482-3486. http://dx.doi.org/10.1128/JCM.00687-09.
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 3482-3486
    • Stevenson, L.G.1    Drake, S.K.2    Shea, Y.R.3    Zelazny, A.M.4    Murray, P.R.5
  • 2
    • 80051876952 scopus 로고    scopus 로고
    • Improved clinical laboratory identification of human pathogenic yeasts by matrix-assisted laser desorption ionization time-of-flight mass spectrometry
    • Bader O, Weig M, Taverne-Ghadwal L, Lugert R, Gross U, Kuhns M. 2011. Improved clinical laboratory identification of human pathogenic yeasts by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin. Microbiol. Infect. 17:1359-1365. http://dx.doi.org/10.1111/j.1469-0691. 2010.03398.x.
    • (2011) Clin. Microbiol. Infect. , vol.17 , pp. 1359-1365
    • Bader, O.1    Weig, M.2    Taverne-Ghadwal, L.3    Lugert, R.4    Gross, U.5    Kuhns, M.6
  • 3
    • 79953869376 scopus 로고    scopus 로고
    • Performance and cost analysis of matrix-assisted laser desorption ionizationtime of flight mass spectrometry for routine identification of yeast
    • Dhiman N, Hall L, Wohlfiel SL, Buckwalter SP, Wengenack NL. 2011. Performance and cost analysis of matrix-assisted laser desorption ionizationtime of flight mass spectrometry for routine identification of yeast. J. Clin. Microbiol. 49:1614-1616. http://dx.doi.org/10.1128/JCM.02381-10.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 1614-1616
    • Dhiman, N.1    Hall, L.2    Wohlfiel, S.L.3    Buckwalter, S.P.4    Wengenack, N.L.5
  • 4
    • 80054060031 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization-time of flight mass spectrometry identification of yeasts is contingent on robust reference spectra
    • Pinto A, Halliday C, Zahra M, van Hal S, Olma T, Maszewska K, Iredell JR, Meyer W, Chen SC. 2011. Matrix-assisted laser desorption ionization-time of flight mass spectrometry identification of yeasts is contingent on robust reference spectra. PLoS One 6:e25712. http://dx.doi.org/10.1371/journal.pone. 0025712.
    • (2011) PLoS One , vol.6
    • Pinto, A.1    Halliday, C.2    Zahra, M.3    Van Hal, S.4    Olma, T.5    Maszewska, K.6    Iredell, J.R.7    Meyer, W.8    Chen, S.C.9
  • 5
    • 84862084348 scopus 로고    scopus 로고
    • Routine identification of medical fungi by the new Vitek MS matrix-assisted laser desorption ionization-time of flight system with a new time-effective strategy
    • Iriart X, Lavergne RA, Fillaux J, Valentin A, Magnaval JF, Berry A, Cassaing S. 2012. Routine identification of medical fungi by the new Vitek MS matrix-assisted laser desorption ionization-time of flight system with a new time-effective strategy. J. Clin. Microbiol. 50:2107-2110. http://dx.doi.org/10. 1128/JCM.06713-11.
    • (2012) J. Clin. Microbiol. , vol.50 , pp. 2107-2110
    • Iriart, X.1    Lavergne, R.A.2    Fillaux, J.3    Valentin, A.4    Magnaval, J.F.5    Berry, A.6    Cassaing, S.7
  • 6
    • 84870955719 scopus 로고    scopus 로고
    • Evaluation of MALDI-TOF mass spectrometry for the identification of medically-important yeasts in the clinical laboratories of Dijon and Lille hospitals
    • Sendid B, Ducoroy P, François N, Lucchi G, Spinali S, Vagner O, Damiens S, Bonnin A, Poulain D, Dalle F. 2013. Evaluation of MALDI-TOF mass spectrometry for the identification of medically-important yeasts in the clinical laboratories of Dijon and Lille hospitals. Med. Mycol. 51:25-32. http://dx.doi.org/10.3109/13693786.2012.693631.
    • (2013) Med. Mycol. , vol.51 , pp. 25-32
    • Sendid, B.1    Ducoroy, P.2    François, N.3    Lucchi, G.4    Spinali, S.5    Vagner, O.6    Damiens, S.7    Bonnin, A.8    Poulain, D.9    Dalle, F.10
  • 10
    • 84879448330 scopus 로고    scopus 로고
    • Comparative evaluation of the Bruker Biotyper and Vitek MS matrixassisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry systems for identification of yeasts of medical importance
    • Mancini N, De Carolis E, Infurnari L, Vella A, Clementi N, Vaccaro L, Ruggeri A, Posteraro B, Burioni R, Clementi M, Sanguinetti M. 2013. Comparative evaluation of the Bruker Biotyper and Vitek MS matrixassisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry systems for identification of yeasts of medical importance. J. Clin. Microbiol. 51:2453-2457. http://dx.doi.org/10.1128/JCM.00841-13.
    • (2013) J. Clin. Microbiol. , vol.51 , pp. 2453-2457
    • Mancini, N.1    De Carolis, E.2    Infurnari, L.3    Vella, A.4    Clementi, N.5    Vaccaro, L.6    Ruggeri, A.7    Posteraro, B.8    Burioni, R.9    Clementi, M.10    Sanguinetti, M.11
  • 11
    • 84874795856 scopus 로고    scopus 로고
    • MALDI-TOF-MS-based species identification and typing approaches in medical mycology
    • Bader O. 2013. MALDI-TOF-MS-based species identification and typing approaches in medical mycology. Proteomics 13:788-799. http://dx.doi.org/10. 1002/pmic.201200468.
    • (2013) Proteomics , vol.13 , pp. 788-799
    • Bader, O.1
  • 12
    • 84876103097 scopus 로고    scopus 로고
    • MALDI-TOF mass spectrometry in the clinical mycology laboratory: Identification of fungi and beyond
    • Posteraro B, De Carolis E, Vella A, Sanguinetti M. 2013. MALDI-TOF mass spectrometry in the clinical mycology laboratory: identification of fungi and beyond. Expert Rev. Proteomics 10:151-164. http://dx.doi.org/10.1586/epr.13.8.
    • (2013) Expert Rev. Proteomics , vol.10 , pp. 151-164
    • Posteraro, B.1    De Carolis, E.2    Vella, A.3    Sanguinetti, M.4
  • 13
    • 84883458788 scopus 로고    scopus 로고
    • Genomics and proteomics as compared to conventional phenotypic approaches for the identificationof the agents of invasive fungal infections
    • Borman AM, Johnson EM. 2013. Genomics and proteomics as compared to conventional phenotypic approaches for the identificationof the agents of invasive fungal infections. Curr. Fungal Infect. Rep. 7:235-243. http://dx.doi.org/10.1007/s12281-013-0149-7.
    • (2013) Curr. Fungal Infect. Rep. , vol.7 , pp. 235-243
    • Borman, A.M.1    Johnson, E.M.2
  • 14
    • 84879779075 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization-time of flight mass spectrometry: A fundamental shift in the routine practice of clinical microbiology
    • Clark AE, Kaleta EJ, Arora A, Wolk DM. 2013. Matrix-assisted laser desorption ionization-time of flight mass spectrometry: a fundamental shift in the routine practice of clinical microbiology. Clin. Microbiol. Rev. 26:547-603. http://dx.doi.org/10.1128/CMR.00072-12.
    • (2013) Clin. Microbiol. Rev. , vol.26 , pp. 547-603
    • Clark, A.E.1    Kaleta, E.J.2    Arora, A.3    Wolk, D.M.4
  • 15
    • 84879769996 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization-time of flight mass spectrometry in clinical microbiology
    • Patel R. 2013. Matrix-assisted laser desorption ionization-time of flight mass spectrometry in clinical microbiology. Clin. Infect. Dis. 57:564-572. http://dx.doi.org/10.1093/cid/cit247.
    • (2013) Clin. Infect. Dis. , vol.57 , pp. 564-572
    • Patel, R.1
  • 16
    • 84876258819 scopus 로고    scopus 로고
    • Evaluation of four pretreatment procedures for MALDI-TOF MS yeast identification inthe routine clinical laboratory
    • Cassagne C, Cella AL, Suchon P, Normand AC, Ranque S, Piarroux R. 2013. Evaluation of four pretreatment procedures for MALDI-TOF MS yeast identification inthe routine clinical laboratory. Med. Mycol. 51:371-377. http://dx.doi.org/ 10.3109/13693786.2012.720720.
    • (2013) Med. Mycol. , vol.51 , pp. 371-377
    • Cassagne, C.1    Cella, A.L.2    Suchon, P.3    Normand, A.C.4    Ranque, S.5    Piarroux, R.6
  • 18
    • 84865175359 scopus 로고    scopus 로고
    • Formic acid-based direct, on-plate testing of yeast and Corynebacterium species by Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometry
    • Theel ES, Schmitt BH, Hall L, Cunningham SA, Walchak RC, Patel R, Wengenack NL. 2012. Formic acid-based direct, on-plate testing of yeast and Corynebacterium species by Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometry. J. Clin. Microbiol. 50:3093-3095. http://dx.doi.org/10.1128/JCM.01045-12.
    • (2012) J. Clin. Microbiol. , vol.50 , pp. 3093-3095
    • Theel, E.S.1    Schmitt, B.H.2    Hall, L.3    Cunningham, S.A.4    Walchak, R.C.5    Patel, R.6    Wengenack, N.L.7
  • 19
    • 84862073569 scopus 로고    scopus 로고
    • Validation of a modified algorithm for the identification of yeast isolates using matrix-assisted laser desorption/ionisation timeof-flight mass spectrometry (MALDI-TOF MS)
    • Van Herendael BH, Bruynseels P, Bensaid M, Boekhout T, De Baere T, Surmont I, Mertens AH. 2012. Validation of a modified algorithm for the identification of yeast isolates using matrix-assisted laser desorption/ionisation timeof-flight mass spectrometry (MALDI-TOF MS). Eur. J. Clin. Microbiol. Infect. Dis. 31:841-848. http://dx.doi.org/10.1007/s10096-011- 1383-y.
    • (2012) Eur. J. Clin. Microbiol. Infect. Dis. , vol.31 , pp. 841-848
    • Van Herendael, B.H.1    Bruynseels, P.2    Bensaid, M.3    Boekhout, T.4    De Baere, T.5    Surmont, I.6    Mertens, A.H.7
  • 20
    • 84862733612 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization-time of flight mass spectrometry-based method for discrimination between molecular types of Cryptococcus neoformans and Cryptococcus gattii
    • Posteraro B, Vella A, Cogliati M, De Carolis E, Florio AR, Posteraro P, Sanguinetti M, Tortorano AM. 2012. Matrix-assisted laser desorption ionization-time of flight mass spectrometry-based method for discrimination between molecular types of Cryptococcus neoformans and Cryptococcus gattii. J. Clin. Microbiol. 50:2472-2476. http://dx.doi.org/10.1128/JCM.00737-12.
    • (2012) J. Clin. Microbiol. , vol.50 , pp. 2472-2476
    • Posteraro, B.1    Vella, A.2    Cogliati, M.3    De Carolis, E.4    Florio, A.R.5    Posteraro, P.6    Sanguinetti, M.7    Tortorano, A.M.8
  • 21
    • 84882755681 scopus 로고    scopus 로고
    • Rapid antifungal susceptibility testing by matrix-assisted laser desorption ionization-time of flight mass spectrometry analysis
    • Vella A, De Carolis E, Vaccaro L, Posteraro P, Perlin DS, Kostrzewa M, Posteraro B, Sanguinetti M. 2013. Rapid antifungal susceptibility testing by matrix-assisted laser desorption ionization-time of flight mass spectrometry analysis. J. Clin. Microbiol. 51:2964-2969. http://dx.doi.org/10.1128/JCM.00903- 13.
    • (2013) J. Clin. Microbiol. , vol.51 , pp. 2964-2969
    • Vella, A.1    De Carolis, E.2    Vaccaro, L.3    Posteraro, P.4    Perlin, D.S.5    Kostrzewa, M.6    Posteraro, B.7    Sanguinetti, M.8
  • 22
    • 34247226157 scopus 로고    scopus 로고
    • Evaluation of VITEK 2 and RapID yeast plus systems for yeast species identification: Experience at a large clinical microbiology laboratory
    • Sanguinetti M, Porta R, Sali M, La Sorda M, Pecorini G, Fadda G, Posteraro B. 2007. Evaluation of VITEK 2 and RapID yeast plus systems for yeast species identification: experience at a large clinical microbiology laboratory. J. Clin. Microbiol. 45:1343-1346. http://dx.doi.org/10.1128/JCM.02469-06.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 1343-1346
    • Sanguinetti, M.1    Porta, R.2    Sali, M.3    La Sorda, M.4    Pecorini, G.5    Fadda, G.6    Posteraro, B.7
  • 23
    • 78149466671 scopus 로고    scopus 로고
    • Relative frequency of albicansand the various non-albicans Candidaspp among candidemia isolates from inpatients in various parts of the world: A systematic review
    • Falagas ME, Roussos N, Vardakas KZ. 2010. Relative frequency of albicansand the various non-albicans Candidaspp among candidemia isolates from inpatients in various parts of the world: a systematic review. Int. J. Infect. Dis. 14:e954-e966. http://dx.doi.org/10.1016/j.ijid.2010.04.006.
    • (2010) Int. J. Infect. Dis. , vol.14
    • Falagas, M.E.1    Roussos, N.2    Vardakas, K.Z.3
  • 24
    • 84869083702 scopus 로고    scopus 로고
    • Epidemiology and outcomes of candidemia in 3648 patients: Data from the Prospective Antifungal Therapy (PATH Alliance) registry, 2004-2008
    • Pfaller M, Neofytos D, Diekema D, Azie N, Meier-Kriesche HU, Quan SP, Horn D. 2012. Epidemiology and outcomes of candidemia in 3648 patients: data from the Prospective Antifungal Therapy (PATH Alliance) registry, 2004-2008. Diagn. Microbiol. Infect. Dis. 74:323-331. http://dx.doi.org/10.1016/j. diagmicrobio.2012.10.003.
    • (2012) Diagn. Microbiol. Infect. Dis. , vol.74 , pp. 323-331
    • Pfaller, M.1    Neofytos, D.2    Diekema, D.3    Azie, N.4    Meier-Kriesche, H.U.5    Quan, S.P.6    Horn, D.7
  • 25
    • 78751683832 scopus 로고    scopus 로고
    • Emerging opportunistic yeast infections
    • Miceli MH, Díaz JA, Lee SA. 2011. Emerging opportunistic yeast infections. Lancet Infect. Dis. 11:142-151. http://dx.doi.org/10.1016/S1473-3099 (10) 70218-8.
    • (2011) Lancet Infect. Dis. , vol.11 , pp. 142-151
    • Miceli, M.H.1    Díaz, J.A.2    Lee, S.A.3
  • 26
    • 74949107171 scopus 로고    scopus 로고
    • Epidemiology of invasive mycoses in North America
    • Pfaller MA, Diekema DJ. 2010. Epidemiology of invasive mycoses in North America. Crit. Rev. Microbiol. 36:1-53. http://dx.doi.org/10.3109/ 10408410903241444.
    • (2010) Crit. Rev. Microbiol. , vol.36 , pp. 1-53
    • Pfaller, M.A.1    Diekema, D.J.2
  • 27
    • 78449308457 scopus 로고    scopus 로고
    • Epidemiology of invasive candidiasis
    • Arendrup MC. 2010. Epidemiology of invasive candidiasis. Curr. Opin. Crit. Care 16:445-452. http://dx.doi.org/10.1097/MCC.0b013e32833e84d2.
    • (2010) Curr. Opin. Crit. Care , vol.16 , pp. 445-452
    • Arendrup, M.C.1
  • 28
    • 84055193579 scopus 로고    scopus 로고
    • Invasive mycoses: Diagnostic challenges
    • Ostrosky-Zeichner L. 2012. Invasive mycoses: diagnostic challenges. Am. J. Med. 125:S14-S24. http://dx.doi.org/10.1016/j.amjmed.2011.10.008.
    • (2012) Am. J. Med. , vol.125
    • Ostrosky-Zeichner, L.1
  • 29
    • 84866460224 scopus 로고    scopus 로고
    • Prospective evaluation of a matrix-assisted laser desorption ionization-time offlight mass spectrometry systemin ahospital clinical microbiology laboratory for identification of bacteria and yeasts: A bench-by-bench study for assessing the impact on time to identification and costeffectiveness
    • Tan KE, Ellis BC, Lee R, Stamper PD, Zhang SX, Carroll KC. 2012. Prospective evaluation of a matrix-assisted laser desorption ionization-time offlight mass spectrometry systemin ahospital clinical microbiology laboratory for identification of bacteria and yeasts: a bench-by-bench study for assessing the impact on time to identification and costeffectiveness. J. Clin. Microbiol. 50:3301-3308. http://dx.doi.org/10.1128/JCM.01405-12.
    • (2012) J. Clin. Microbiol. , vol.50 , pp. 3301-3308
    • Tan, K.E.1    Ellis, B.C.2    Lee, R.3    Stamper, P.D.4    Zhang, S.X.5    Carroll, K.C.6
  • 30
    • 84886911636 scopus 로고    scopus 로고
    • Impact of rapid organism identification via matrix-assisted laser desorption/ionization time-of-flight combined with antimicrobial stewardship team intervention in adult patients with bacteremia and candidemia
    • Huang AM, Newton D, Kunapuli A, Gandhi TN, Washer LL, Isip J, Collins CD, Nagel JL. 2013. Impact of rapid organism identification via matrix-assisted laser desorption/ionization time-of-flight combined with antimicrobial stewardship team intervention in adult patients with bacteremia and candidemia. Clin. Infect. Dis. 57:1237-1245. http://dx.doi.org/10.1093/cid/cit498.
    • (2013) Clin. Infect. Dis. , vol.57 , pp. 1237-1245
    • Huang, A.M.1    Newton, D.2    Kunapuli, A.3    Gandhi, T.N.4    Washer, L.L.5    Isip, J.6    Collins, C.D.7    Nagel, J.L.8
  • 31
    • 84865188339 scopus 로고    scopus 로고
    • Optimization of the preanalytical steps of matrix-assisted laser desorption ionization-time of flight mass spectrometry identification provides a flexible and efficient tool for identification of clinical yeast isolates in medical laboratories
    • Goyer M, Lucchi G, Ducoroy P, Vagner O, Bonnin A, Dalle F. 2012. Optimization of the preanalytical steps of matrix-assisted laser desorption ionization-time of flight mass spectrometry identification provides a flexible and efficient tool for identification of clinical yeast isolates in medical laboratories. J. Clin. Microbiol. 50:3066-3068. http://dx.doi.org/10.1128/JCM. 06381-11.
    • (2012) J. Clin. Microbiol. , vol.50 , pp. 3066-3068
    • Goyer, M.1    Lucchi, G.2    Ducoroy, P.3    Vagner, O.4    Bonnin, A.5    Dalle, F.6
  • 33
    • 85047686687 scopus 로고    scopus 로고
    • Risks of "blind" automated identification systemsin medical microbiology
    • Mancini N, Burioni R, Sanguinetti M, Clementi M. 2013. Risks of "blind" automated identification systemsin medical microbiology. J. Clin. Microbiol. 51:3911. http://dx.doi.org/10.1128/JCM.02032-13.
    • (2013) J. Clin. Microbiol. , vol.51 , pp. 3911
    • Mancini, N.1    Burioni, R.2    Sanguinetti, M.3    Clementi, M.4
  • 35
    • 84874059447 scopus 로고    scopus 로고
    • Development of a clinically comprehensive database and a simple procedure for identification of molds from solid media by matrix-assisted laser desorption ionization-time of flight mass spectrometry
    • Lau AF, Drake SK, Calhoun LB, Henderson CM, Zelazny AM. 2013. Development of a clinically comprehensive database and a simple procedure for identification of molds from solid media by matrix-assisted laser desorption ionization-time of flight mass spectrometry. J. Clin. Microbiol. 51:828-834. http://dx.doi.org/10.1128/JCM.02852-12.
    • (2013) J. Clin. Microbiol. , vol.51 , pp. 828-834
    • Lau, A.F.1    Drake, S.K.2    Calhoun, L.B.3    Henderson, C.M.4    Zelazny, A.M.5
  • 36
    • 80052483277 scopus 로고    scopus 로고
    • Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the identification of bacteria and yeasts in a clinical microbiological laboratory: A review
    • Steensels D, Verhaegen J, Lagrou K. 2011. Matrix-assisted laser desorption ionization-time of flight mass spectrometry for the identification of bacteria and yeasts in a clinical microbiological laboratory: a review. Acta Clin. Belg. 66:267-273. http://dx.doi.org/10.1179/ACB.66.4.2062567.
    • (2011) Acta Clin. Belg. , vol.66 , pp. 267-273
    • Steensels, D.1    Verhaegen, J.2    Lagrou, K.3


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