Erratum to Evolution of insect olfactory receptors (eLife, (2014) 3, e02115, 10.7554/eLife.02115);Evolution of insect olfactory receptors

eLife

Volumn 2014, Issue 3, 2014, Pages

  Missbach, Christine ^a   Dweck, Hany K M ^a   Vogel, Heiko ^a   Vilcinskas, Andreas ^b   Stensmyr, Marcus C ^c   Hansson, Bill S ^a   Grosse Wilde, Ewald ^a  

^a MAX PLANCK INSTITUTE FOR CHEMICAL ECOLOGY   (Germany)

^b JUSTUS LIEBIG UNIVERSITY   (Germany)

^c LUND UNIVERSITY   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; IONOTROPIC RECEPTOR; TRANSCRIPTOME;

ARCHAEOGNATHA; ARTICLE; BIOINFORMATICS; DNA SYNTHESIS; EVOLUTION; FLUORESCENCE IN SITU HYBRIDIZATION; HABITAT; IMAGE PROCESSING; INSECT; MOLECULAR BIOLOGY; MORPHOLOGY; NONHUMAN; ODOR; OLFACTORY RECEPTOR; PHASMATODEA; PHYSIOLOGY; PROTEIN EXPRESSION; PROTOSTOMIA; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA EXTRACTION; SEQUENCE ANALYSIS; TASTE BUD; THYSANURA; ANIMAL; CLASSIFICATION; PHYLOGENY;

ANIMALS; BIOLOGICAL EVOLUTION; INSECTS; OLFACTORY RECEPTOR NEURONS; PHYLOGENY; TRANSCRIPTOME;

EID: 84898725860     PISSN: None     EISSN: 2050084X     Source Type: Journal    
DOI: 10.7554/eLife.05087     Document Type: Erratum

References (65)

1. Adel T. 1984. Sensilla and sensilla pattern on the antenna of Thermobia domestica and Lepisma saccharina (Insecta: Zygentoma). Braunschweiger Naturkundliche Schriften 2:191-218.
2. Ai M, Min S, Grosjean Y, Leblanc C, Bell R, Benton R, Suh GS. 2010. Acid sensing by the Drosophila olfactory system. Nature 468:691-695. doi: 10.1038/nature09537.
3. Abuin L, Bargeton B, Ulbrich MH, Isacoff EY, Kellenberger S, Benton R. 2011. Functional architecture of olfactory ionotropic glutamate receptors. Neuron 69:44-60. doi: 10.1016/j.neuron.2010.11.042.
4. Altner H, Prillinger L. 1980. Ultrastructure of invertebrate chemo-, thermo-and hygroreceptors and its functional significance. International Review of Cytology 67:69-139. doi: 10.1016/S0074-7696.
5. Angerer LM, Angerer RC. 1992. In situ hybridization to cellular RNA with radiolabeled RNA probes. In: Wilkinson DG, editor. In Situ Hybridization. A practical approach. Oxford: IRL Press. p. 15-32.
6. Benton R, Vannice KS, Gomez-Diaz C, Vosshall LB. 2009. Variant ionotropic glutamate receptors as chemosensory receptors in Drosophila. Cell 136:149-162. doi: 10.1016/j.cell.2008.12.001.
7. Benton R, Sachse S, Michnick SW, Vosshall LB. 2006. A typical membrane topology and heteromeric function of Drosophila odorant receptors in vivo. PLOS Biology 4:e20. doi: 10.1371/journal.pbio.0040020.
8. Berg J, Schmidt K. 1997. Comparative morphology and moulting of Sensilla basiconica of Lepisma saccharina Linnaeus (Zygentoma: Lepismatidae) and Machilis sp. (Archaeognatha: Machilidae). International Journal of Insect Morphology & Embryology 26:161-172. doi: 10.1016/S0020-7322(97)00018-4.
9. Bockhorst KG. 1988. Patterns of sensilla on the antennae of some Machilidae (Insecta, Archaeognatha). Braunschweiger Naturkundliche Schriften 3:137-170.
10. Boore JL, Lavrov DV, Brown WM. 1998. Gene translocation links insects and crustaceans. Nature 392:667-668. doi: 10.1038/33577.
11. Buck L, Axel R. 1991. A novel multigene family may encode odorant receptors: a molecular basis for odor recognition. Cell 65:175-187. doi: 10.1016/0092-8674(91)90418-X.
12. Clyne PJ, Warr CG, Freeman MR, Lessing D, Kim J, Carlson JR. 1999. A novel family of divergent seven-transmembrane proteins: candidate odorant receptors in Drosophila. Neuron 22:327-338. doi: 10.1016/S0896-6273(00)81093-4.
13. Clyne PJ, Warr CG, Carlson JR. 2000. Candidate taste receptors in Drosophila. Science 287:1830-1834. doi: 10.1126/science.287.5459.1830.
14. Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M. 2005. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21:3674-3676. doi: 10.1093/bioinformatics/bti610.
15. Croset V, Rytz R, Cummins SF, Budd A, Brawand D, Kaessmann H, Gibson TJ, Benton R. 2010. Ancient protostome origin of chemosensory ionotropic glutamate receptors and the evolution of insect taste and olfaction. PLOS Genetics 6:e1001064. doi: 10.1371/journal.pgen.1001064.
16. Eddy SR. 2011. Accelerated profile HMM searches. PLOS Computational Biology 7:e1002195. doi: 10.1371/journal.pcbi.1002195.
17. Elmore T, Ignell R, Carlson JR, Smith DP. 2003. Targeted mutation of a Drosophila odor receptor defines receptor requirement in a novel class of sensillum. Journal of Neuroscience 23:9906-9912.
18. Farris SM. 2005. Evolution of insect mushroom bodies: old clues, new insights. Arthropod Structure & Development 34:211-234. doi: 10.1016/j.asd.2005.01.008.
19. Firestein S. 2001. How the olfactory system makes sense of scents. Nature 413:211-218. doi: 10.1038/35093026.
20. Friedrich M, Tautz D. 1995. Ribosomal DNA phylogeny of the major extant arthropod classes and the evolution of myriapods. Nature 376:165-167. doi: 10.1038/376165a0.
21. Fröhlich A, Lu Z. 2013. The "rosette-like" structures in the cuticle of Petrobius brevistylis are the openings of epidermal glands. Arthropod Structure & Development 42:89-94. doi: 10.1016/j.asd.2012.10.001.
22. Gao Q, Chess A. 1999. Identification of candidate Drosophila olfactory receptors from genomic DNA sequence. Genomics 60:31-39. doi: 10.1006/geno.1999.5894.
23. Getahun MN, Wicher D, Hansson BS, Olsson SB. 2012. Temporal response dynamics of Drosophila olfactory sensory neurons depends on receptor type and response polarity. Frontiers in Cellular Neuroscience 6:1-11. doi: 10.3389/fncel.2012.00054.
24. Guo M, Krieger J, Grosse-Wilde E, Mißbach C, Zhang L, Breer H. 2014. Variant ionotropic receptors are expressed in olfactory sensory neurons of coeloconic sensilla on the antenna of the desert locust (Schistocerca gregaria). International Journal of Biological Sciences 10:1-14. doi: 10.7150/ijbs.7624.
25. Hallem EA, Ho MG, Carlson JR. 2004. The molecular basis of odor coding in the Drosophila antenna. Cell 117:965-979. doi: 10.1016/j.cell.2004.05.012.
26. Hansen-Delkeskamp E. 2001. Responsiveness of antennal taste hairs of the apterygotan insect, Thermobia domestica (Zygentoma); an electrophysiological investigation. Journal of Insect Physiology 47:689-697. doi: 10.1016/S0022-1910(00)00159-1.
27. Hildebrand JG, Shepherd GM. 1997. Mechanisms of olfactory discrimination: converging evidence for common principles across phyla. Annual Review of Neuroscience 20:595-631. doi: 10.1146/annurev.neuro.20.1.595.
28. Hill CA, Fox AN, Pitts RJ, Kent LB, Tan PL, Chrystal MA, Cravchik A, Collins FH, Robertson HM, Zwiebel LJ. 2002. G protein coupled receptors in Anopheles gambiae. Science 298:176-178. doi: 10.1126/science.1076196.
29. Hollins B, Hardin D, Gimelbrant AA, McClintock TS. 2003. Olfactory-enriched transcripts are cell-specific markers in the lobster olfactory organ. The Journal of Comparative Neurology 455:125-138. doi: 10.1002/cne.10489.
30. Katoh K, Kuma K, Toh H, Miyata T. 2005. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Research 33:511-518. doi: 10.1093/nar/gki198.
31. Kirkness EF, Haas BJ, Sun W, Braig HR, Perotti MA, Clark JM, Lee SH, Robertson HM, Kennedy RC, Elhaik E, Gerlach D, Kriventseva EV, Elsik CG, Graur D, Hill CA, Veenstra JA, Walenz B, Tubío JM, Ribeiro JM, Rozas J, Johnston JS, Reese JT, Popadic A, Tojo M, Raoult D, Reed DL, Tomoyasu Y, Kraus E, Mittapalli O, Margam VM, Li HM, Meyer JM, Johnson RM, Romero-Severson J, Vanzee JP, Alvarez-Ponce D, Vieira FG, Aguadé M, Guirao-Rico S, Anzola JM, Yoon KS, Strycharz JP, Unger MF, Christley S, Lobo NF, Seufferheld MJ, Wang N, Dasch GA, Struchiner CJ, Madey G, Hannick LI, Bidwell S, Joardar V, Caler E, Shao R, Barker SC, Cameron S, Bruggner RV, Regier A, Johnson J, Viswanathan L, Utterback TR, Sutton GG, Lawson D, Waterhouse RM, Venter JC, Strausberg RL, Berenbaum MR, Collins FH, Zdobnov EM, Pittendrigh BR. 2010. Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle. Proceedings of the National Academy of Sciences of the United States of America 107:12168-12173. doi: 10.1073/pnas.1003379107.
32. Krång A-S, Knaden M, Steck K, Hansson BS. 2012. Transition from sea to land: olfactory function and constraints in the terrestrial hermit crab Coenobita clypeatus. Proceedings Biological Sciences/The Royal Society 279:3510-3519. doi: 10.1098/rspb.2012.0596.
33. Krieger J, Klink O, Mohl C, Raming K, Breer H. 2003. A candidate olfactory receptor subtype highly conserved across different insect orders. Journal of Comparative Physiology A, Neuroethology, Sensory, Neural, and Behavioral Physiology 189:519-526. doi: 10.1007/s00359-003-0427-x.
34. Kumar BN, Taylor RW, Pask GM, Zwiebel LJ, Newcomb RD, Christie DL. 2013. A conserved aspartic acid is important for agonist (VUAA1) and odorant/tuning receptor-dependent activation of the insect odorant co-receptor (Orco). PLOS ONE 8:e70218. doi: 10.1371/journal.pone.0070218.
35. Larsson MC, Domingos AI, Jones WD, Chiappe ME, Amrein H, Vosshall LB. 2004. Or83b encodes a broadly expressed odorant receptor essential for Drosophila olfaction. Neuron 43:703-714. doi: 10.1016/j.neuron.2004.08.019.
36. Liu K, Linder CR, Warnow T. 2011. RAxML and FastTree: comparing two methods for large-scale maximum likelihood phylogeny estimation. PLOS ONE 6:e27731. doi: 10.1371/journal.pone.0027731.
37. Lundin C, Käll L, Kreher SA, Kapp K, Sonnhammer EL, Carlson JR, Heijne Gv, Nilsson I. 2007. Membrane topology of the Drosophila OR83b odorant receptor. FEBS Letters 581:5601-5604. doi: 10.1016/j.febslet.2007.11.007.
38. Missbach C, Harzsch S, Hansson BS. 2011. New insights into an ancient insect nose: the olfactory pathway of Lepismachilis y-signata (Archaeognatha: Machilidae). Arthropod Structure & Development 40:317-333. doi: 10.1016/j.asd.2011.03.004.
39. Mombaerts P. 1999. Seven-transmembrane proteins as odorant and chemosensory receptors. Science 286:707-711. doi: 10.1126/science.286.5440.707.
40. Nakagawa T, Pellegrino M, Sato K, Vosshall LB, Touhara K. 2012. Amino acid residues contributing to function of the heteromeric insect olfactory receptor complex. PLOS ONE 7:e32372. doi: 10.1371/journal.pone.0032372.
41. Peñalva-Arana DC, Lynch M, Robertson HM. 2009. The chemoreceptor genes of the waterflea Daphnia pulex: many Grs but no Ors. Bmc Evolutionary Biology 9:79. doi: 10.1186/1471-2148-9-79.
42. Pitts RJ, Fox AN, Zwiebel LJ. 2004. A highly conserved candidate chemoreceptor expressed in both olfactory and gustatory tissues in the malaria vector Anopheles gambiae. Proceedings of the National Academy of Sciences of the United States of America 101:5058-5063. doi: 10.1073/pnas.0308146101.
43. Price MN, Dehal PS, Arkin AP. 2009. FastTree: computing large minimum evolution trees with profiles instead of a distance matrix. Molecular Biology and Evolution 26:1641-1650. doi: 10.1093/molbev/msp077.
44. Rebora M, Salerno G, Piersanti S, Dell'Otto A, Gaino E. 2012. Olfaction in dragonflies: electrophysiological evidence. Journal of Insect Physiology 58:270-277. doi: 10.1016/j.jinsphys.2011.11.018.
45. Regier JC, Shultz JW, Zwick A, Hussey A, Ball B, Wetzer R, Martin JW, Cunningham CW. 2010. Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences. Nature 463:1079-1083. doi: 10.1038/nature08742.
46. Robertson HM. 2001. Taste: independent origins of chemoreception coding systems? Current Biology 11:560-562. doi: 10.1016/S0960-9822(01)00343-8.
47. Robertson HM, Warr CG, Carlson JR. 2003. Molecular evolution of the insect chemoreceptor gene superfamily in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America 100:14537-14542. doi: 10.1073/pnas.2335847100.
48. Robertson HM, Thomas JH. 2006. The putative chemoreceptor families of C. elegans (January 06, 2006). In: The C. elegans Research Community, editor. WormBook. doi: 10.1895/wormbook.1.66.1. http://www.wormbook.org
49. Robertson HM, Wanner KW. 2006. The chemoreceptor superfamily in the honey bee Apis mellifera: expansions of the odorant, but not gustatory, receptor families. Genome Research 16:1395-1403. doi: 10.1101/gr.5057506.
50. Rota-Stabelli O, Daley AC, Pisani D. 2013. Molecular timetrees reveal a Cambrian colonization of land and a new scenario for ecdysozoan evolution. Current Biology 23:392-398. doi: 10.1016/j.cub.2013.01.026.
51. Sargsyan V, Getahun MN, Lavista Llanos S, Olsson SB, Hansson BS, Wicher D. 2011. Phosphorylation via PKC regulates the function of the Drosophila odorant co-receptor. Frontiers in Cellular Neuroscience 5:5. doi: 10.3389/fncel.2011.00005.
52. Sato K, Pellegrino M, Nakagawa T, Nakagawa T, Vosshall LB, Touhara K. 2008. Insect olfactory receptors are heteromeric ligand-gated ion channels. Nature 452:1002-1006. doi: 10.1038/nature06850.
53. Scott K, Brady R Jnr, Cravchik A, Morozov P, Rzhetsky A, Zuker C, Axel R. 2001. A chemosensory gene family encoding candidate gustatory and olfactory receptors in Drosophila. Cell 104:661-673. doi: 10.1016/S0092-8674(01)00263-X.
54. Silbering AF, Rytz R, Grosjean Y, Abuin L, Ramdya P, Jefferis GS, Benton R. 2011. Complementary function and integrated wiring of the evolutionarily distinct Drosophila olfactory subsystems. Journal of Neuroscience 31:13357-13375. doi: 10.1523/jneurosci.2360-11.2011.
55. Smadja C, Shi P, Butlin RK, Robertson HM. 2009. Large gene family expansions and adaptive evolution for odorant and gustatory receptors in the pea aphid, Acyrthosiphon pisum. Molecular Biology and Evolution 26:2073-2086. doi: 10.1093/molbev/msp116.
56. Strausfeld NJ, Hansen L, Ll Y, Gomez RS, Ito K. 1998. Evolution, discovery, and interpretations of arthropod mushroom bodies. Learning & Memory 5:11-37. doi: 10.1101/lm.5.1.11.
57. Tadesse T, Schmidt M, Walthall WW, Tai PC, Derby CD. 2011. Distribution and function of splash, an achaete-scute homolog in the adult olfactory organ of the Caribbean spiny lobster Panulirus argus. Developmental Neurobiology 71:316-335. doi: 10.1002/dneu.20862.
58. Tauxe GM, MacWilliam D, Boyle SM, Guda T, Ray A. 2013. Targeting a dual detector of skin and CO2 to modify mosquito host seeking. Cell 155:1365-1379. doi: 10.1016/j.cell.2013.11.013.
59. Trautwein MD, Wiegmann BM, Beutel R, Kjer KM, Yeates D. 2012. Advances in insect phylogeny at the dawn of the postgenomic era. Annual Review of Entomology 57:499-468. doi: 10.1146/annurev-ento-120710-100538.
60. Vosshall LB, Amrein H, Morozov PS, Rzhetsky A, Axel R. 1999. A spatial map of olfactory receptor expression in the Drosophila antenna. Cell 96:725-736. doi: 10.1016/s0092-8674(00)80582-6.
61. Vosshall LB, Hansson BS. 2011. A unified nomenclature system for the insect olfactory coreceptor. Chemical Senses 36:497-498. doi: 10.1093/chemse/bjr022.
62. Wicher D, Schäfer R, Bauernfeind R, Stensmyr MC, Heller R, Heinemann SH, Hansson BS. 2008. Drosophila odorant receptors are both ligand-gated and cyclic-nucleotide-activated cation channels. Nature 452:1007-1011. doi: 10.1038/nature06861.
63. Wiegmann BM, Trautwein MD, Kim JW, Cassel BK, Bertone MA, Winterton SL, Yeates DK. 2009. Single-copy nuclear genes resolve the phylogeny of holometabolous insects. BMC Biology 7:1-16. doi: 10.1186/1741-7007-7-34.
64. Yang Y, Krieger J, Zhang L, Breer H. 2012. The olfactory co-receptor Orco from the migratory locust (Locusta migratoria) and the desert locust (Schistocerca gregaria): identification and expression pattern. International Journal of Biological Sciences 8:159-170. doi: 10.7150/ijbs.8.159.
65. Zhou X, Slone JD, Rokas A, Berger SL, Liebig J, Ray A, Reinberg D, Zwiebel LJ. 2012. Phylogenetic and transcriptomic analysis of chemosensory receptors in a pair of divergent ant species reveals sex-specific signatures of odor coding. PLOS Genetics 8:e1002930. doi: 10.1371/journal.pgen.1002930.