-
1
-
-
65449131152
-
Imaging intracellular RNA distribution and dynamics in living cells
-
Tyagi S(2009) Imaging intracellular RNA distribution and dynamics in living cells. Nat Methods 6: 331-338
-
(2009)
Nat Methods
, vol.6
, pp. 331-338
-
-
Tyagi, S.1
-
2
-
-
0027367040
-
Transport and localization of exogenous myelin basic protein mRNA microinjected into oligodendrocytes
-
DOI 10.1083/jcb.123.2.431
-
Ainger K, Avossa D, Morgan F, Hill SJ, Barry C, et al.(1993) Transport and localization of exogenous myelin basic protein mRNA microinjected into oligodendrocytes. J Cell Biol 123: 431-441 (Pubitemid 23313966)
-
(1993)
Journal of Cell Biology
, vol.123
, Issue.2
, pp. 431-441
-
-
Ainger, K.1
Avossa, D.2
Morgan, F.3
Hill, S.J.4
Barry, C.5
Barbarese, E.6
Carson, J.H.7
-
4
-
-
0141640944
-
A molecular mechanism for mRNA trafficking in neuronal dendrites
-
Shan J, Munro TP, Barbarese E, Carson JH, Smith R(2003) A molecular mechanism for mRNA trafficking in neuronal dendrites. J Neurosci 23: 8859-8866 (Pubitemid 37210898)
-
(2003)
Journal of Neuroscience
, vol.23
, Issue.26
, pp. 8859-8866
-
-
Shan, J.1
Munro, T.P.2
Barbarese, E.3
Carson, J.H.4
Smith, R.5
-
5
-
-
61649121490
-
Single molecule tracking of quantum dot-labeled mRNAs in a cell nucleus
-
Ishihama Y, Funatsu T(2009) Single molecule tracking of quantum dot-labeled mRNAs in a cell nucleus. Biochem Biophys Res Commun 381: 33-38
-
(2009)
Biochem Biophys Res Commun
, vol.381
, pp. 33-38
-
-
Ishihama, Y.1
Funatsu, T.2
-
6
-
-
33646152336
-
Imaging of single mRNA molecules moving within a living cell nucleus
-
Tadakuma H, Ishihama Y, Shibuya T, Tani T, Funatsu T(2006) Imaging of single mRNA molecules moving within a living cell nucleus. Biochem Biophys Res Commun 344: 772-779
-
(2006)
Biochem Biophys Res Commun
, vol.344
, pp. 772-779
-
-
Tadakuma, H.1
Ishihama, Y.2
Shibuya, T.3
Tani, T.4
Funatsu, T.5
-
7
-
-
0032185810
-
Localization of ASH1 mRNA particles in living yeast
-
Bertrand E, Chartrand P, Schaefer M, Shenoy SM, Singer RH, et al.(1998) Localization of ASH1 mRNA particles in living yeast. Mol Cell 2: 437-445 (Pubitemid 128381296)
-
(1998)
Molecular Cell
, vol.2
, Issue.4
, pp. 437-445
-
-
Bertrand, E.1
Chartrand, P.2
Schaefer, M.3
Shenoy, S.M.4
Singer, R.H.5
Long, R.M.6
-
8
-
-
84869112037
-
Genetic encoding of fluorescent RNA ensures a bright future for visualizing nucleic acid dynamics
-
Dictenberg J(2012) Genetic encoding of fluorescent RNA ensures a bright future for visualizing nucleic acid dynamics. Trends Biotechnol 30: 621-626
-
(2012)
Trends Biotechnol
, vol.30
, pp. 621-626
-
-
Dictenberg, J.1
-
9
-
-
0038376482
-
Live imaging of endogenous RNA reveals a diffusion and entrapment mechanism for nanos mRNA localization in Drosophila
-
DOI 10.1016/S0960-9822(03)00451-2
-
Forrest KM, Gavis ER(2003) Live imaging of endogenous RNA reveals a diffusion and entrapment mechanism for nanos mRNA localization in Drosophila. Curr Biol 13: 1159-1168 (Pubitemid 36872938)
-
(2003)
Current Biology
, vol.13
, Issue.14
, pp. 1159-1168
-
-
Forrest, K.M.1
Gavis, E.R.2
-
10
-
-
50249124582
-
-
Zimyanin VL, Belaya K, Pecreaux J, Gilchrist MJ, Clark A, et al.(2008) In vivo imaging of oskar mRNA transport reveals the mechanism of posterior localization. Cell 134: 843-853
-
(2008)
Vivo Imaging of Oskar MRNA Transport Reveals the Mechanism of Posterior Localization. Cell
, vol.134
, pp. 843-853
-
-
Zimyanin, V.L.1
Belaya, K.2
Pecreaux, J.3
Gilchrist, M.J.4
Clark, A.5
-
11
-
-
33746492940
-
Localization of bicoid mRNA in Late Oocytes Is Maintained by Continual Active Transport
-
DOI 10.1016/j.devcel.2006.06.006, PII S1534580706002620
-
Weil TT, Forrest KM, Gavis ER(2006) Localization of bicoid mRNA in late oocytes is maintained by continual active transport. Dev Cell 11: 251-262 (Pubitemid 44138499)
-
(2006)
Developmental Cell
, vol.11
, Issue.2
, pp. 251-262
-
-
Weil, T.T.1
Forrest, K.M.2
Gavis, E.R.3
-
12
-
-
33646591544
-
Transcriptional Pulsing of a Developmental Gene
-
DOI 10.1016/j.cub.2006.03.092, PII S0960982206014266
-
Chubb JR, Trcek T, Shenoy SM, Singer RH(2006) Transcriptional pulsing of a developmental gene. Curr Biol 16: 1018-1025 (Pubitemid 43728209)
-
(2006)
Current Biology
, vol.16
, Issue.10
, pp. 1018-1025
-
-
Chubb, J.R.1
Trcek, T.2
Shenoy, S.M.3
Singer, R.H.4
-
13
-
-
33846958757
-
Dynamics of bidirectional transport of Arc mRNA in neuronal dendrites
-
Dynes JL, Steward O(2007) Dynamics of bidirectional transport of Arc mRNA in neuronal dendrites. J Comp Neurol 500: 433-447
-
(2007)
J Comp Neurol
, vol.500
, pp. 433-447
-
-
Dynes, J.L.1
Steward, O.2
-
14
-
-
0347156907
-
Single mRNA molecules demonstrate probabilistic movement in living mammalian cells
-
DOI 10.1016/S0960-9822(02)01436-7, PII S0960982202014367
-
Fusco D, Accornero N, Lavoie B, Shenoy SM, Blanchard JM, et al.(2003) Single mRNA molecules demonstrate probabilistic movement in living mammalian cells. Curr Biol 13: 161-167 (Pubitemid 36154346)
-
(2003)
Current Biology
, vol.13
, Issue.2
, pp. 161-167
-
-
Fusco, D.1
Accornero, N.2
Lavoie, B.3
Shenoy, S.M.4
Blanchard, J.-M.5
Singer, R.H.6
Bertrand, E.7
-
15
-
-
79960631283
-
Nuclear export dynamics of RNAprotein complexes
-
Grunwald D, Singer RH, Rout M(2011) Nuclear export dynamics of RNAprotein complexes. Nature 475: 333-341
-
(2010)
Nature
, vol.475
, pp. 333-341
-
-
Grunwald, D.1
Singer, R.H.2
Rout, M.3
-
16
-
-
0034257926
-
CaMKIIalpha 39 untranslated regiondirected mRNA translocation in living neurons: Visualization by GFP linkage
-
Rook MS, Lu M, Kosik KS(2000) CaMKIIalpha 39 untranslated regiondirected mRNA translocation in living neurons: visualization by GFP linkage. J Neurosci 20: 6385-6393
-
(2000)
J Neurosci
, vol.20
, pp. 6385-6393
-
-
Rook, M.S.1
Lu, M.2
Kosik, K.S.3
-
17
-
-
63049130350
-
Singlemolecule imaging of beta-Actin mRNAs in the cytoplasm of a living cell
-
Yamagishi M, Ishihama Y, Shirasaki Y, Kurama H, Funatsu T(2009) Singlemolecule imaging of beta-Actin mRNAs in the cytoplasm of a living cell. Exp Cell Res 315: 1142-1147
-
(2009)
Exp Cell Res
, vol.315
, pp. 1142-1147
-
-
Yamagishi, M.1
Ishihama, Y.2
Shirasaki, Y.3
Kurama, H.4
Funatsu, T.5
-
18
-
-
2942733310
-
Dynamics of single mRNPs in nuclei of living cells
-
DOI 10.1126/science.1099754
-
Shav-Tal Y, Darzacq X, Shenoy SM, Fusco D, Janicki SM, et al.(2004) Dynamics of single mRNPs in nuclei of living cells. Science 304: 1797-1800 (Pubitemid 38787895)
-
(2004)
Science
, vol.304
, Issue.5678
, pp. 1797-1800
-
-
Shav-Tal, Y.1
Darzacq, X.2
Shenoy, S.M.3
Fusco, D.4
Janicki, S.M.5
Spector, D.L.6
Singer, R.H.7
-
19
-
-
34547637607
-
N-GFP: An RNA reporter system for live-cell imaging
-
DOI 10.1038/nmeth1065, PII NMETH1065
-
Daigle N, Ellenberg J(2007) LambdaN-GFP: an RNA reporter system for livecell imaging. Nat Methods 4: 633-636 (Pubitemid 47202473)
-
(2007)
Nature Methods
, vol.4
, Issue.8
, pp. 633-636
-
-
Daigle, N.1
Ellenberg, J.2
-
20
-
-
79959923521
-
Gquadruplex RNA structure as a signal for neurite mRNA targeting
-
Subramanian M, Rage F, Tabet R, Flatter E, Mandel JL, et al.(2011) Gquadruplex RNA structure as a signal for neurite mRNA targeting. EMBO Rep 12: 697-704
-
(2010)
EMBO Rep
, vol.12
, pp. 697-704
-
-
Subramanian, M.1
Rage, F.2
Tabet, R.3
Flatter, E.4
Mandel, J.L.5
-
21
-
-
34250210525
-
Imaging dynamics of endogenous mitochondrial RNA in single living cells
-
DOI 10.1038/nmeth1030, PII NMETH1030
-
Ozawa T, Natori Y, Sato M, Umezawa Y(2007) Imaging dynamics of endogenous mitochondrial RNA in single living cells. Nat Methods 4: 413-419 (Pubitemid 46901275)
-
(2007)
Nature Methods
, vol.4
, Issue.5
, pp. 413-419
-
-
Ozawa, T.1
Natori, Y.2
Sato, M.3
Umezawa, Y.4
-
22
-
-
0029670262
-
Molecular beacons: Probes that fluoresce upon hybridization
-
Tyagi S, Kramer FR(1996) Molecular beacons: probes that fluoresce upon hybridization. Nat Biotechnol 14: 303-308
-
(1996)
Nat Biotechnol
, vol.14
, pp. 303-308
-
-
Tyagi, S.1
Kramer, F.R.2
-
23
-
-
0344824383
-
Visualizing the distribution and transport of mRNAs in living cells
-
DOI 10.1073/pnas.2233244100
-
Bratu DP, Cha BJ, Mhlanga MM, Kramer FR, Tyagi S(2003) Visualizing the distribution and transport of mRNAs in living cells. Proc Natl Acad Sci U S A 100: 13308-13313 (Pubitemid 37444738)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.23
, pp. 13308-13313
-
-
Bratu, D.P.1
Cha, B.-J.2
Mhlanga, M.M.3
Kramer, F.R.4
Tyagi, S.5
-
24
-
-
27744463933
-
Stochasticity of manganese superoxide dismutase mRNA expression in breast carcinoma cells by molecular beacon imaging
-
DOI 10.1002/cbic.200500046
-
Drake TJ, Medley CD, Sen A, Rogers RJ, Tan W(2005) Stochasticity of manganese superoxide dismutase mRNA expression in breast carcinoma cells by molecular beacon imaging. Chembiochem 6: 2041-2047 (Pubitemid 41598180)
-
(2005)
ChemBioChem
, vol.6
, Issue.11
, pp. 2041-2047
-
-
Drake, T.J.1
Medley, C.D.2
Sen, A.3
Rogers, R.J.4
Tan, W.5
-
25
-
-
56749169576
-
NLS peptide conjugated molecular beacons for visualizing nuclear RNA in living cells
-
Nitin N, Bao G(2008) NLS peptide conjugated molecular beacons for visualizing nuclear RNA in living cells. Bioconjug Chem 19: 2205-2211
-
(2008)
Bioconjug Chem
, vol.19
, pp. 2205-2211
-
-
Nitin, N.1
Bao, G.2
-
26
-
-
65849507275
-
Simultaneous detection of mRNA and protein stem cell markers in live cells
-
Rhee WJ, Bao G(2009) Simultaneous detection of mRNA and protein stem cell markers in live cells. BMC Biotechnol 9: 30
-
(2009)
BMC Biotechnol
, vol.9
, pp. 30
-
-
Rhee, W.J.1
Bao, G.2
-
28
-
-
34548724424
-
Avoiding false-positive signals with nuclease-vulnerable molecular beacons in single living cells
-
Chen AK, Behlke MA, Tsourkas A(2007) Avoiding false-positive signals with nuclease-vulnerable molecular beacons in single living cells. Nucleic Acids Res 35: e105
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Chen, A.K.1
Behlke, M.A.2
Tsourkas, A.3
-
29
-
-
47249136607
-
Efficient cytosolic delivery of molecular beacon conjugates and flow cytometric analysis of target RNA
-
Chen AK, Behlke MA, Tsourkas A(2008) Efficient cytosolic delivery of molecular beacon conjugates and flow cytometric analysis of target RNA. Nucleic Acids Res 36: e69
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Chen, A.K.1
Behlke, M.A.2
Tsourkas, A.3
-
30
-
-
75649136910
-
Sub-cellular trafficking and functionality of 29-O-methyl and 29-O-methyl-phosphorothioate molecular beacons
-
Chen AK, Behlke MA, Tsourkas A(2009) Sub-cellular trafficking and functionality of 29-O-methyl and 29-O-methyl-phosphorothioate molecular beacons. Nucleic Acids Res 37: e149
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Chen, A.K.1
Behlke, M.A.2
Tsourkas, A.3
-
31
-
-
17144392600
-
TRNA-linked molecular beacons for imaging mRNAs in the cytoplasm of living cells
-
DOI 10.1093/nar/gki302
-
Mhlanga MM, Vargas DY, Fung CW, Kramer FR, Tyagi S(2005) tRNA-linked molecular beacons for imaging mRNAs in the cytoplasm of living cells. Nucleic Acids Res 33: 1902-1912 (Pubitemid 41748335)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.6
, pp. 1902-1912
-
-
Mhlanga, M.M.1
Vargas, D.Y.2
Fung, C.W.3
Kramer, F.R.4
Tyagi, S.5
-
32
-
-
0002726408
-
Linear 29 O-methyl RNA probes for the visualization of RNA in living cells
-
Molenaar C, Marras SA, Slats JC, Truffert JC, Lemaitre M, et al.(2001) Linear 29 O-Methyl RNA probes for the visualization of RNA in living cells. Nucleic Acids Res 29: E89-89
-
(2001)
Nucleic Acids Res
, vol.29
-
-
Molenaar, C.1
Marras, S.A.2
Slats, J.C.3
Truffert, J.C.4
Lemaitre, M.5
-
33
-
-
78649565985
-
Imaging RNA in living cells with molecular beacons: Current perspective and challenges
-
Chen AK, Tsourkas A(2009) Imaging RNA in living cells with molecular beacons: current perspective and challenges. J Innov Opt Health Sci 2: 315-324
-
(2009)
J Innov Opt Health Sci
, vol.2
, pp. 315-324
-
-
Chen, A.K.1
Tsourkas, A.2
-
34
-
-
60349129845
-
Using molecular beacons to study dispersal of mRNPs from the gene locus
-
van den Bogaard PT, Tyagi S(2009) Using molecular beacons to study dispersal of mRNPs from the gene locus. Methods Mol Biol 464: 91-103
-
(2009)
Methods Mol Biol
, vol.464
, pp. 91-103
-
-
Van Den Bogaard, P.T.1
Tyagi, S.2
-
35
-
-
28044451048
-
Mechanism of mRNA transport in the nucleus
-
DOI 10.1073/pnas.0505580102
-
Vargas DY, Raj A, Marras SA, Kramer FR, Tyagi S(2005) Mechanism of mRNA transport in the nucleus. Proc Natl Acad Sci U S A 102: 17008-17013 (Pubitemid 41692674)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.47
, pp. 17008-17013
-
-
Vargas, D.Y.1
Raj, A.2
Marras, S.A.E.3
Kramer, F.R.4
Tyagi, S.5
-
36
-
-
77955788881
-
Ratiometric bimolecular beacons for the sensitive detection of RNA in single living cells
-
Chen AK, Davydenko O, Behlke MA, Tsourkas A(2010) Ratiometric bimolecular beacons for the sensitive detection of RNA in single living cells. Nucleic Acids Res 38: e148
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Chen, A.K.1
Davydenko, O.2
Behlke, M.A.3
Tsourkas, A.4
-
37
-
-
84883485384
-
Quantitative assessment of ratiometric bimolecular beacons as a tool for imaging single engineered RNA transcripts and measuring gene expression in living cells
-
Zhang X, Song Y, Shah AY, Lekova V, Raj A, et al.(2013) Quantitative assessment of ratiometric bimolecular beacons as a tool for imaging single engineered RNA transcripts and measuring gene expression in living cells. Nucleic Acids Res 41: e152
-
(2013)
Nucleic Acids Res
, vol.41
-
-
Zhang, X.1
Song, Y.2
Shah, A.Y.3
Lekova, V.4
Raj, A.5
-
40
-
-
80051978813
-
Cytoskeletal control of CD36 diffusion promotes its receptor and signaling function
-
Jaqaman K, Kuwata H, Touret N, Collins R, Trimble WS, et al.(2011) Cytoskeletal control of CD36 diffusion promotes its receptor and signaling function. Cell 146: 593-606
-
(2010)
Cell
, vol.146
, pp. 593-606
-
-
Jaqaman, K.1
Kuwata, H.2
Touret, N.3
Collins, R.4
Trimble, W.S.5
-
41
-
-
27244450483
-
Single-particle tracking of murine polyoma virus-like particles on live cells and artificial membranes
-
DOI 10.1073/pnas.0504407102
-
Ewers H, Smith AE, Sbalzarini IF, Lilie H, Koumoutsakos P, et al.(2005) Single-particle tracking of murine polyoma virus-like particles on live cells and artificial membranes. Proc Natl Acad Sci U S A 102: 15110-15115 (Pubitemid 41513343)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.42
, pp. 15110-15115
-
-
Ewers, H.1
Smith, A.E.2
Sbalzarini, I.F.3
Lilie, H.4
Koumoutsakos, P.5
Helenius, A.6
-
42
-
-
84876002488
-
Single-molecule fluorescence imaging in living cells
-
Xia T, Li N, Fang X(2013) Single-molecule fluorescence imaging in living cells. Annu Rev Phys Chem 64: 459-480
-
(2013)
Annu Rev Phys Chem
, vol.64
, pp. 459-480
-
-
Xia, T.1
Li, N.2
Fang, X.3
-
43
-
-
84879098594
-
Nanofountain probe electroporation(NFP-E) of single cells
-
Kang W, Yavari F, Minary-Jolandan M, Giraldo-Vela JP, Safi A, et al.(2013) Nanofountain Probe Electroporation(NFP-E) of Single Cells. Nano Lett 13: 2448-2457
-
(2013)
Nano Lett
, vol.13
, pp. 2448-2457
-
-
Kang, W.1
Yavari, F.2
Minary-Jolandan, M.3
Giraldo-Vela, J.P.4
Safi, A.5
|