-
1
-
-
30744459862
-
What makes a gene name? Named entity recognition in the biomedical literature
-
DOI 10.1093/bib/6.4.357
-
Leser U., Hakenberg J., What makes a gene name? Named entity recognition in the biomedical literature. Briefings in Bioinformatics 2005 6 4 357 369 2-s2.0-30744459862 10.1093/bib/6.4.357 (Pubitemid 43091941)
-
(2005)
Briefings in Bioinformatics
, vol.6
, Issue.4
, pp. 357-369
-
-
Leser, U.1
Hakenberg, J.2
-
2
-
-
16244414494
-
Introduction to the bio-entity recognition task at JNLPBA
-
Kim J.-D., Ohta T., Tsuruoka Y., Tateisi Y., Collier N., Introduction to the bio-entity recognition task at JNLPBA. Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications 2004 Stroudsburg, Pa, USA 70 75
-
Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and Its Applications 2004 Stroudsburg, Pa, USA
, pp. 70-75
-
-
Kim, J.-D.1
Ohta, T.2
Tsuruoka, Y.3
Tateisi, Y.4
Collier, N.5
-
3
-
-
51049088874
-
Overview of BioCreative II gene mention recognition
-
2, article S2 2-s2.0-51049088874 10.1186/gb-2008-9-s2-s2
-
Smith L., Tanabe L. K., Ando R., Kuo C.-J., Chung I.-F., Hsu C.-N., Lin Y.-S., Klinger R., Friedrich C. M., Ganchev K., Torii M., Liu H., Haddow B., Struble C. A., Povinelli R. J., Vlachos A., Baumgartner W. A. Jr., Hunter L., Carpenter B., Tsai R. T.-H., Dai H.-J., Liu F., Chen Y., Sun C., Katrenko S., Adriaans P., Blaschke C., Torres R., Neves M., Nakov P., Divoli A., Maña-López M., Mata J., Wilbur W. J., Overview of BioCreative II gene mention recognition. Genome Biology 2008 9 2, article S2 2-s2.0-51049088874 10.1186/gb-2008-9-s2-s2
-
(2008)
Genome Biology
, vol.9
-
-
Smith, L.1
Tanabe, L.K.2
Ando, R.3
Kuo, C.-J.4
Chung, I.-F.5
Hsu, C.-N.6
Lin, Y.-S.7
Klinger, R.8
Friedrich, C.M.9
Ganchev, K.10
Torii, M.11
Liu, H.12
Haddow, B.13
Struble, C.A.14
Povinelli, R.J.15
Vlachos, A.16
Baumgartner Jr., W.A.17
Hunter, L.18
Carpenter, B.19
Tsai, R.T.-H.20
Dai, H.-J.21
Liu, F.22
Chen, Y.23
Sun, C.24
Katrenko, S.25
Adriaans, P.26
Blaschke, C.27
Torres, R.28
Neves, M.29
Nakov, P.30
Divoli, A.31
Maña-López, M.32
Mata, J.33
Wilbur, W.J.34
more..
-
6
-
-
0002353623
-
Detecting gene symbols and names in biological texts: A first step toward pertinent information extraction
-
Proux D., Rechenmann F., Julliard L., Pillet V. V., Jacq B., Detecting gene symbols and names in biological texts: a first step toward pertinent information extraction. Genome Informatics Work. Genome Informatics 1998 9 72 80
-
(1998)
Genome Informatics Work. Genome Informatics
, vol.9
, pp. 72-80
-
-
Proux, D.1
Rechenmann, F.2
Julliard, L.3
Pillet, V.V.4
Jacq, B.5
-
8
-
-
0024610919
-
A tutorial on hidden markov models and selected applications in speech recognition
-
2-s2.0-0024610919 10.1109/5.18626
-
Rabiner L. R., A tutorial on hidden markov models and selected applications in speech recognition. Proceedings of the IEEE 1989 77 2 257 286 2-s2.0-0024610919 10.1109/5.18626
-
(1989)
Proceedings of the IEEE
, vol.77
, Issue.2
, pp. 257-286
-
-
Rabiner, L.R.1
-
11
-
-
33745600603
-
Exploiting context for biomedical entity recognition: From syntax to the web
-
Finkel J., Dingare S., Nguyen H., Nissim M., Manning C., Sinclair G., Exploiting context for biomedical entity recognition: from syntax to the web. Proceedings of the Joint Workshop on Natural Language Processing in Biomedicine and its applications (JNLPBA '04) 2004
-
Proceedings of the Joint Workshop on Natural Language Processing in Biomedicine and Its Applications (JNLPBA '04) 2004
-
-
Finkel, J.1
Dingare, S.2
Nguyen, H.3
Nissim, M.4
Manning, C.5
Sinclair, G.6
-
12
-
-
0142192295
-
Conditional random fields: Probabilistic models for segmenting and labeling sequence data
-
Lafferty J. D., McCallum A., Pereira F. C. N., Conditional random fields: probabilistic models for segmenting and labeling sequence data. Proceedings of the 18th International Conference on Machine Learning 2001 San Francisco, Calif, USA 282 289
-
Proceedings of the 18th International Conference on Machine Learning 2001 San Francisco, Calif, USA
, pp. 282-289
-
-
Lafferty, J.D.1
McCallum, A.2
Pereira, F.C.N.3
-
14
-
-
27144489164
-
A tutorial on support vector machines for pattern recognition
-
Burges C. J. C., A tutorial on support vector machines for pattern recognition. Data Mining and Knowledge Discovery 1998 2 2 121 167 2-s2.0-27144489164 (Pubitemid 128695475)
-
(1998)
Data Mining and Knowledge Discovery
, vol.2
, Issue.2
, pp. 121-167
-
-
Burges, C.J.C.1
-
15
-
-
84885612850
-
Boosting performance of bio-entity recognition by combining results from multiple systems
-
Si L., Kanungo T., Huang X., Boosting performance of bio-entity recognition by combining results from multiple systems. Proceedings of the 5th International Workshop on Bioinformatics 2005 New York, NY, USA 76 83
-
Proceedings of the 5th International Workshop on Bioinformatics 2005 New York, NY, USA
, pp. 76-83
-
-
Si, L.1
Kanungo, T.2
Huang, X.3
-
17
-
-
70350051042
-
Named entity recognition in biomedical literature: A comparison of support vector machines and conditional random fields
-
Berlin, Germany Springer
-
Liu F., Chen Y., Manderick B., Filipe J., Cordeiro J., Cardoso J., Named entity recognition in biomedical literature: a comparison of support vector machines and conditional random fields. Enterprise Information Systems 2009 Berlin, Germany Springer 137 147
-
(2009)
Enterprise Information Systems
, pp. 137-147
-
-
Liu, F.1
Chen, Y.2
Manderick, B.3
Filipe, J.4
Cordeiro, J.5
Cardoso, J.6
-
18
-
-
30344472426
-
BioThesaurus: A web-based thesaurus of protein and gene names
-
DOI 10.1093/bioinformatics/bti749
-
Liu H., Hu Z.-Z., Zhang J., Wu C., BioThesaurus: a web-based thesaurus of protein and gene names. Bioinformatics 2006 22 1 103 105 2-s2.0-30344472426 10.1093/bioinformatics/bti749 (Pubitemid 43057014)
-
(2006)
Bioinformatics
, vol.22
, Issue.1
, pp. 103-105
-
-
Liu, H.1
Hu, Z.-Z.2
Zhang, J.3
Wu, C.4
-
19
-
-
0345863927
-
The Unified Medical Language System (UMLS): Integrating biomedical terminology
-
Bodenreider O., The Unified Medical Language System (UMLS): integrating biomedical terminology. Nucleic Acids Research 2004 32 supplement 1 D267 D270 2-s2.0-0345863927 (Pubitemid 38081653)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.DATABASE ISS.
-
-
Bodenreider, O.1
-
20
-
-
80053495924
-
Word representations: A simple and general method for semi-supervised learning
-
Turian J., Ratinov L., Bengio Y., Word representations: a simple and general method for semi-supervised learning. Proceedings of the 48th Annual Meeting of the Association for Computational Linguistics (ACL '10) July 2010 Stroudsburg, Pa, USA 384 394 2-s2.0-80053495924
-
Proceedings of the 48th Annual Meeting of the Association for Computational Linguistics (ACL '10) July 2010 Stroudsburg, Pa, USA 2-s2.0-80053495924
, pp. 384-394
-
-
Turian, J.1
Ratinov, L.2
Bengio, Y.3
-
22
-
-
0000458784
-
Producing high-dimensional semantic spaces from lexical co-occurrence
-
Lund K., Burgess C., Producing high-dimensional semantic spaces from lexical co-occurrence. Behavior Research Methods, Instruments, and Computers 1996 28 2 203 208 2-s2.0-0000458784 (Pubitemid 126454814)
-
(1996)
Behavior Research Methods, Instruments, and Computers
, vol.28
, Issue.2
, pp. 203-208
-
-
Lund, K.1
Burgess, C.2
-
27
-
-
85022919385
-
Class-based n-gram models of natural language
-
Brown P. F., deSouza P. V., Mercer R. L., Pietra V. J. D., Lai J. C., Class-based n-gram models of natural language. Computational Linguistics 1992 18 467 479
-
(1992)
Computational Linguistics
, vol.18
, pp. 467-479
-
-
Brown, P.F.1
Desouza, P.V.2
Mercer, R.L.3
Pietra, V.J.D.4
Lai, J.C.5
-
28
-
-
0142166851
-
A neural probabilistic language model
-
2-s2.0-0142166851 10.1162/153244303322533223
-
Bengio Y., Ducharme R., Vincent P., Jauvin C., A neural probabilistic language model. Journal of Machine Learning Research 2003 3 6 1137 1155 2-s2.0-0142166851 10.1162/153244303322533223
-
(2003)
Journal of Machine Learning Research
, vol.3
, Issue.6
, pp. 1137-1155
-
-
Bengio, Y.1
Ducharme, R.2
Vincent, P.3
Jauvin, C.4
-
29
-
-
33845260073
-
Neural probabilistic language models
-
DOI 10.1007/10985687-6, Innovations in Machine Learning: Theory and Applications
-
Bengio Y., Schwenk H., Senécal J. -S., Morin F., Gauvain J.-L., Holmes P. D. E., Jain P. L. C., Neural probabilistic language models. Innovations in Machine Learning 2006 Berlin, Germany Springer 137 186 (Pubitemid 44856917)
-
(2006)
Studies in Fuzziness and Soft Computing
, vol.194
, pp. 137-186
-
-
Bengio, Y.1
Schwenk, H.2
Senecal, J.-S.3
Morin, F.4
Gauvain, J.-L.5
-
30
-
-
79959829092
-
Recurrent neural network based language model
-
Mikolov T., Karafiát M., Burget L., Jan C., Khudanpur S., Recurrent neural network based language model. Proceedings of the 11th Annual Conference of the International Speech Communication Association: Spoken Language Processing for All (INTERSPEECH '10) September 2010 1045 1048 2-s2.0-79959829092
-
Proceedings of the 11th Annual Conference of the International Speech Communication Association: Spoken Language Processing for All (INTERSPEECH '10) September 2010 2-s2.0-79959829092
, pp. 1045-1048
-
-
Mikolov, T.1
Karafiát, M.2
Burget, L.3
Jan, C.4
Khudanpur, S.5
-
31
-
-
80053558787
-
Natural language processing (almost) from scratch
-
2-s2.0-80053558787
-
Collobert R., Weston J., Bottou L., Karlen M., Kavukcuoglu K., Kuksa P., Natural language processing (almost) from scratch. Journal of Machine Learning Research 2011 12 2493 2537 2-s2.0-80053558787
-
(2011)
Journal of Machine Learning Research
, vol.12
, pp. 2493-2537
-
-
Collobert, R.1
Weston, J.2
Bottou, L.3
Karlen, M.4
Kavukcuoglu, K.5
Kuksa, P.6
-
32
-
-
85083951332
-
-
CoRR, abs/1301.3781, 2013
-
Mikolov T., Chen K., Corrado G., Dean J., Efficient estimation of word representations in vector space. CoRR, vol. abs/1301.3781, 2013
-
Efficient Estimation of Word Representations in Vector Space
-
-
Mikolov, T.1
Chen, K.2
Corrado, G.3
Dean, J.4
-
33
-
-
84870518953
-
Clinical entity recognition using structural support vector machines with rich features
-
Tang B., Cao H., Wu Y., Jiang M., Xu H., Clinical entity recognition using structural support vector machines with rich features. Proceedings of the ACM 6th International Workshop on Data and Text Mining in Biomedical Informatics 2012 New York, NY, USA 13 20
-
Proceedings of the ACM 6th International Workshop on Data and Text Mining in Biomedical Informatics 2012 New York, NY, USA
, pp. 13-20
-
-
Tang, B.1
Cao, H.2
Wu, Y.3
Jiang, M.4
Xu, H.5
-
34
-
-
84875945878
-
Recognizing clinical entities in hospital discharge summaries using Structural Support Vector Machines with word representation features
-
Tang B., Cao H., Wu Y., Jiang M., Xu H., Recognizing clinical entities in hospital discharge summaries using Structural Support Vector Machines with word representation features. BMC Medical Informatics and Decision Making 2013 13 supplement 1 S1
-
(2013)
BMC Medical Informatics and Decision Making
, vol.13
, Issue.SUPPL. 1
-
-
Tang, B.1
Cao, H.2
Wu, Y.3
Jiang, M.4
Xu, H.5
-
35
-
-
84881139675
-
A hybrid system for temporal information extraction from clinical text
-
10.1136/amiajnl-2013-001635
-
Tang B., Wu Y., Jiang M., Chen Y., Denny J. C., Xu H., A hybrid system for temporal information extraction from clinical text. Journal of the American Medical Informatics Association 2013 10.1136/amiajnl-2013-001635
-
(2013)
Journal of the American Medical Informatics Association
-
-
Tang, B.1
Wu, Y.2
Jiang, M.3
Chen, Y.4
Denny, J.C.5
Xu, H.6
|