-
1
-
-
0027751663
-
The C elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
-
R.C. Lee, R.L. Feinbaum, and V. Ambros The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14 Cell 75 1993 843 854
-
(1993)
Cell
, vol.75
, pp. 843-854
-
-
Lee, R.C.1
Feinbaum, R.L.2
Ambros, V.3
-
2
-
-
0036544755
-
Micro RNAs are complementary to 3′ UTR sequence motifs that mediate negative post-transcriptional regulation
-
E.C. Lai Micro RNAs are complementary to 3′ UTR sequence motifs that mediate negative post-transcriptional regulation Nat. Genet. 30 2002 363 364
-
(2002)
Nat. Genet.
, vol.30
, pp. 363-364
-
-
Lai, E.C.1
-
4
-
-
67749132423
-
Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
-
S.W. Chi, J.B. Zang, A. Mele, and R.B. Darnell Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps Nature 460 2009 479 486
-
(2009)
Nature
, vol.460
, pp. 479-486
-
-
Chi, S.W.1
Zang, J.B.2
Mele, A.3
Darnell, R.B.4
-
5
-
-
77950920903
-
Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP
-
M. Hafner, M. Landthaler, L. Burger, M. Khorshid, J. Hausser, P. Berninger, A. Rothballer, M. Ascano, A.-C. Jungkamp, M. Munschauer, A. Ulrich, G.S. Wardle, S. Dewell, M. Zavolan, and T. Tuschl Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP Cell 141 2010 129 141
-
(2010)
Cell
, vol.141
, pp. 129-141
-
-
Hafner, M.1
Landthaler, M.2
Burger, L.3
Khorshid, M.4
Hausser, J.5
Berninger, P.6
Rothballer, A.7
Ascano, M.8
Jungkamp, A.-C.9
Munschauer, M.10
Ulrich, A.11
Wardle, G.S.12
Dewell, S.13
Zavolan, M.14
Tuschl, T.15
-
6
-
-
58249088751
-
MicroRNAs: Target recognition and regulatory functions
-
D.P. Bartel MicroRNAs: target recognition and regulatory functions Cell 136 2009 215 233
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
7
-
-
11844278458
-
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
-
B.P. Lewis, C.B. Burge, and D.P. Bartel Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets Cell 120 2005 15 20
-
(2005)
Cell
, vol.120
, pp. 15-20
-
-
Lewis, B.P.1
Burge, C.B.2
Bartel, D.P.3
-
9
-
-
4644237189
-
Fast and effective prediction of microRNA/target duplexes
-
M. Rehmsmeier, P. Steffen, M. Hochsmann, and R. Giegerich Fast and effective prediction of microRNA/target duplexes RNA 10 2004 1507 1517
-
(2004)
RNA
, vol.10
, pp. 1507-1517
-
-
Rehmsmeier, M.1
Steffen, P.2
Hochsmann, M.3
Giegerich, R.4
-
10
-
-
14044251458
-
Human MicroRNA targets
-
B. John, A.J. Enright, A. Aravin, T. Tuschl, C. Sander, and D.S. Marks Human MicroRNA targets PLoS Bio. 2 2004 e363
-
(2004)
PLoS Bio.
, vol.2
, pp. 363
-
-
John, B.1
Enright, A.J.2
Aravin, A.3
Tuschl, T.4
Sander, C.5
Marks, D.S.6
-
11
-
-
34748821761
-
The role of site accessibility in microRNA target recognition
-
M. Kertesz, N. Iovino, U. Unnerstall, U. Gaul, and E. Segal The role of site accessibility in microRNA target recognition Nat. Genet. 39 2007 1278 1284
-
(2007)
Nat. Genet.
, vol.39
, pp. 1278-1284
-
-
Kertesz, M.1
Iovino, N.2
Unnerstall, U.3
Gaul, U.4
Segal, E.5
-
12
-
-
34250805982
-
MicroRNA targeting specificity in mammals: Determinants beyond seed pairing
-
A. Grimson, K.K. Farh, W.K. Johnston, P. Garrett-Engele, L.P. Lim, and D.P. Bartel MicroRNA targeting specificity in mammals: determinants beyond seed pairing Mol. Cell 27 2007 91 105
-
(2007)
Mol. Cell
, vol.27
, pp. 91-105
-
-
Grimson, A.1
Farh, K.K.2
Johnston, W.K.3
Garrett-Engele, P.4
Lim, L.P.5
Bartel, D.P.6
-
13
-
-
13944282215
-
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
-
L.P. Lim, N.C. Lau, P. Garrett-Engele, A. Grimson, J.M. Schelter, J. Castle, D.P. Bartel, P.S. Linsley, and J.M. Johnson Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs Nature 433 2005 769 773
-
(2005)
Nature
, vol.433
, pp. 769-773
-
-
Lim, L.P.1
Lau, N.C.2
Garrett-Engele, P.3
Grimson, A.4
Schelter, J.M.5
Castle, J.6
Bartel, D.P.7
Linsley, P.S.8
Johnson, J.M.9
-
14
-
-
84867690270
-
Alternative RISC assembly: Binding and repression of microRNA-mRNA duplexes by human Ago proteins
-
M.M. Janas, B. Wang, A.S. Harris, M. Aguiar, J.M. Shaffer, Y.V. Subrahmanyam, M.A. Behlke, K.W. Wucherpfennig, S.P. Gygi, E. Gagnon, and C.D. Novina Alternative RISC assembly: binding and repression of microRNA-mRNA duplexes by human Ago proteins RNA 18 2012 2041 2055
-
(2012)
RNA
, vol.18
, pp. 2041-2055
-
-
Janas, M.M.1
Wang, B.2
Harris, A.S.3
Aguiar, M.4
Shaffer, J.M.5
Subrahmanyam, Y.V.6
Behlke, M.A.7
Wucherpfennig, K.W.8
Gygi, S.P.9
Gagnon, E.10
Novina, C.D.11
-
15
-
-
84876918219
-
MicroRNAs inhibit the translation of target mRNAs on the endoplasmic reticulum in arabidopsis
-
S. Li, L. Liu, X. Zhuang, Y. Yu, X. Liu, X. Cui, L. Ji, Z. Pan, X. Cao, B. Mo, F. Zhang, N. Raikhel, L. Jiang, and X. Chen MicroRNAs inhibit the translation of target mRNAs on the endoplasmic reticulum in arabidopsis Cell 153 2013 562 574
-
(2013)
Cell
, vol.153
, pp. 562-574
-
-
Li, S.1
Liu, L.2
Zhuang, X.3
Yu, Y.4
Liu, X.5
Cui, X.6
Ji, L.7
Pan, Z.8
Cao, X.9
Mo, B.10
Zhang, F.11
Raikhel, N.12
Jiang, L.13
Chen, X.14
-
16
-
-
77950348609
-
Genome-wide dissection of microRNA functions and cotargeting networks using gene set signatures
-
J.S. Tsang, M.S. Ebert, and A. van Oudenaarden Genome-wide dissection of microRNA functions and cotargeting networks using gene set signatures Mol. Cell 38 2010 140 153
-
(2010)
Mol. Cell
, vol.38
, pp. 140-153
-
-
Tsang, J.S.1
Ebert, M.S.2
Van Oudenaarden, A.3
-
17
-
-
29144505309
-
The widespread impact of mammalian MicroRNAs on mRNA repression and evolution
-
K.K. Farh, A. Grimson, C. Jan, B.P. Lewis, W.K. Johnston, L.P. Lim, C.B. Burge, and D.P. Bartel The widespread impact of mammalian MicroRNAs on mRNA repression and evolution Science 310 2005 1817 1821
-
(2005)
Science
, vol.310
, pp. 1817-1821
-
-
Farh, K.K.1
Grimson, A.2
Jan, C.3
Lewis, B.P.4
Johnston, W.K.5
Lim, L.P.6
Burge, C.B.7
Bartel, D.P.8
-
18
-
-
66249106716
-
Predicting microRNA targets and functions: Traps for the unwary
-
W. Ritchie, S. Flamant, and J.E. Rasko Predicting microRNA targets and functions: traps for the unwary Nat. Methods 6 2009 397 398
-
(2009)
Nat. Methods
, vol.6
, pp. 397-398
-
-
Ritchie, W.1
Flamant, S.2
Rasko, J.E.3
-
19
-
-
75349100888
-
MimiRNA: A microRNA expression profiler and classification resource designed to identify functional correlations between microRNAs and their targets
-
W. Ritchie, S. Flamant, and J.E. Rasko MimiRNA: a microRNA expression profiler and classification resource designed to identify functional correlations between microRNAs and their targets Bioinformatics 26 2010 223 227
-
(2010)
Bioinformatics
, vol.26
, pp. 223-227
-
-
Ritchie, W.1
Flamant, S.2
Rasko, J.E.3
-
20
-
-
20944450160
-
Combinatorial microRNA target predictions
-
A. Krek, D. Grun, M.N. Poy, R. Wolf, L. Rosenberg, E.J. Epstein, P. MacMenamin, I. da Piedade, K.C. Gunsalus, M. Stoffel, and N. Rajewsky Combinatorial microRNA target predictions Nat. Gene. 37 2005 495 500
-
(2005)
Nat. Gene.
, vol.37
, pp. 495-500
-
-
Krek, A.1
Grun, D.2
Poy, M.N.3
Wolf, R.4
Rosenberg, L.5
Epstein, E.J.6
Macmenamin, P.7
Da Piedade, I.8
Gunsalus, K.C.9
Stoffel, M.10
Rajewsky, N.11
-
21
-
-
74049088856
-
Lost in translation: An assessment and perspective for computational microRNA target identification
-
P. Alexiou, M. Maragkakis, G.L. Papadopoulos, M. Reczko, and A.G. Hatzigeorgiou Lost in translation: an assessment and perspective for computational microRNA target identification Bioinformatics 25 2009 3049 3055
-
(2009)
Bioinformatics
, vol.25
, pp. 3049-3055
-
-
Alexiou, P.1
Maragkakis, M.2
Papadopoulos, G.L.3
Reczko, M.4
Hatzigeorgiou, A.G.5
-
22
-
-
58149186499
-
MiRecords: An integrated resource for microRNA-target interactions
-
F. Xiao, Z. Zuo, G. Cai, S. Kang, X. Gao, and T. Li miRecords: an integrated resource for microRNA-target interactions Nucleic Acids Res. 37 2009 D105 D110
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Xiao, F.1
Zuo, Z.2
Cai, G.3
Kang, S.4
Gao, X.5
Li, T.6
-
23
-
-
78651307694
-
StarBase: A database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
-
J.H. Yang, J.H. Li, P. Shao, H. Zhou, Y.Q. Chen, and L.H. Qu starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data Nucleic Acids Res. 39 2011 D202 D209
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Yang, J.H.1
Li, J.H.2
Shao, P.3
Zhou, H.4
Chen, Y.Q.5
Qu, L.H.6
-
24
-
-
84862176128
-
TarBase 6.0: Capturing the exponential growth of miRNA targets with experimental support
-
T. Vergoulis, I.S. Vlachos, P. Alexiou, G. Georgakilas, M. Maragkakis, M. Reczko, S. Gerangelos, N. Koziris, T. Dalamagas, and A.G. Hatzigeorgiou TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support Nucleic Acids Res. 40 2012 D222 D229
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Vergoulis, T.1
Vlachos, I.S.2
Alexiou, P.3
Georgakilas, G.4
Maragkakis, M.5
Reczko, M.6
Gerangelos, S.7
Koziris, N.8
Dalamagas, T.9
Hatzigeorgiou, A.G.10
-
25
-
-
77955475953
-
Expanding the microRNA targeting code: Functional sites with centered pairing
-
C. Shin, J.W. Nam, K.K. Farh, H.R. Chiang, A. Shkumatava, and D.P. Bartel Expanding the microRNA targeting code: functional sites with centered pairing Mol. Cell 38 2010 789 802
-
(2010)
Mol. Cell
, vol.38
, pp. 789-802
-
-
Shin, C.1
Nam, J.W.2
Farh, K.K.3
Chiang, H.R.4
Shkumatava, A.5
Bartel, D.P.6
|