Viral Quasispecies Assembly via Maximal Clique Enumeration

PLoS Computational Biology

Volumn 10, Issue 3, 2014, Pages

  Töpfer, Armin ^a,b   Marschall, Tobias ^c   Bull, Rowena A ^d   Luciani, Fabio ^d   Schönhuth, Alexander ^c   Beerenwinkel, Niko ^a,b  

^a ETH ZURICH   (Switzerland)

^b SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

^c CWI   (Netherlands)

^d UNIVERSITY OF NEW SOUTH WALES   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

POPULATION STATISTICS; VIRUSES;

COMPUTATIONAL APPROACH; GENETICS DIVERSITIES; HAPLOTYPES; INSERTIONS AND DELETIONS; MAXIMAL CLIQUE ENUMERATIONS; NEXT-GENERATION SEQUENCING; STATISTIC MODELING; TREATMENT OUTCOMES; VIRAL QUASISPECIES; VIRUS POPULATION;

ITERATIVE METHODS;

ARTICLE; COMPUTER PREDICTION; COMPUTER SIMULATION; DNA SEQUENCE; GENE DELETION; GENE INSERTION; GENE MUTATION; HAPLOTYPE; HEPATITIS C VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; MAXIMAL CLIQUE ENUMERATION; NEXT GENERATION SEQUENCING; NONHUMAN; STATISTICAL MODEL; VIRAL QUASISPECIES; VIRUS; VIRUS STRAIN;

CD8-POSITIVE T-LYMPHOCYTES; COMPUTATIONAL BIOLOGY; GENE DELETION; GENETIC VARIATION; GENOME, VIRAL; HAPLOTYPES; HEPACIVIRUS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MODELS, STATISTICAL; MUTATION; PROBABILITY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SOFTWARE; VIRUSES;

EID: 84897392958     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1003515     Document Type: Article

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