A colorimetric assay method for invA gene of Salmonella using DNAzyme probe self-assembled gold nanoparticles as single tag

Sensors and Actuators, B: Chemical

Volumn 198, Issue , 2014, Pages 87-93

  Luo, Rong ^a   Li, Yahui ^b   Lin, Xiaojuan ^b   Dong, Fang ^a   Zhang, Wei ^b   Yan, Li ^b   Cheng, Wei ^a   Ju, Huangxian ^b,c   Ding, Shijia ^a,b  

^a THE FIRST AFFILIATED HOSPITAL OF CHONGQING MEDICAL UNIVERSITY   (China)

^b CHONGQING MEDICAL UNIVERSITY   (China)

^c NANJING UNIVERSITY   (China)

Author keywords

Colorimetric; Gold nanoparticles; InvA gene; Salmonella

Indexed keywords

COLOR; COLORIMETRY; DIAGNOSIS; FIBER OPTIC SENSORS; FOOD SAFETY; GENES; GOLD NANOPARTICLES; METAL NANOPARTICLES; PROBES; SALMONELLA;

CLINICAL DIAGNOSIS; COLORIMETRIC; COLORIMETRIC ASSAYS; COLORIMETRIC SENSING; ENVIRONMENTAL MONITORING; POLYMERASE CHAIN REACTION TECHNIQUES; SALMONELLA DETECTIONS; TETRAMETHYLBENZIDINE;

POLYMERASE CHAIN REACTION;

EID: 84897381333     PISSN: 09254005     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.snb.2014.02.104     Document Type: Article

References (36)

1. H. Peng, and L.A. Shelef Automated simultaneous detection of low levels of listeriae and Salmonellae in foods Int. J. Food Microbiol. 63 2001 225 233 (Pubitemid 32143820)
2. S. Chen, A. Yee, M. Griffiths, C. Larkin, C.T. Yamashiro, R. Behari, C. Paszko-Kolva, K. Rahn, and S.A. De Grandis The evaluation of a fluorogenic polymerase chain reaction assay for the detection of Salmonella species in food commodities Int. J. Food Microbiol. 35 1997 239 250 (Pubitemid 27148437)
3. S. Kumar, K. Balakrishna, and H.V. Batra Enrichment-ELISA for detection of Salmonella typhi from food and water samples Biomed. Environ. Sci. 21 2008 137 143 (Pubitemid 351702405)
4. B. Liu, X.J. Zhou, L.D. Zhang, W.B. Liu, X.L. Dan, C.L. Shi, and X.M. Shi Development of a novel multiplex PCR assay for the identification of Salmonella enterica typhimurium and enteritidis Food Control 27 2012 87 93
5. M.S. Myint, Y.J. Johnson, N.L. Tablante, and R.A. Heckert The effect of pre-enrichment protocol on the sensitivity and specificity of PCR for detection of naturally contaminated Salmonella in raw poultry compared to conventional culture Food Microbiol. 23 2006 599 604
6. E. Delibato, B. Auricchio, F. Anniballi, S. Bifolchi, E. Filetici, and D. De Medici A one day diagnostic real-time PCR for detection of Salmonella in meat J. Biotechnol. 150S 2010 131
7. M. Trkov, and G. Avguštin An improved 16S rRNA based PCR method for the specific detection of Salmonella enterica Int. J. Food Microbiol. 80 2003 67 75
8. H.C. Su, Q. Ma, K. Shang, T. Liu, H.S. Yin, and S.Y. Ai Gold nanoparticles as colorimetric sensor: a case study on E. coli O157:H7 as a model for Gram-negative bacteria Sens. Actuators B: Chem. 161 2012 298 303
9. J. Dong, H. Zhao, M.R. Xu, Q. Ma, and S.Y. Ai A label-free electrochemical impedance immunosensor based on AuNPs/PAMAM-MWCNT-Chi nanocomposite modified glassy carbon electrode for detection of Salmonella typhimurium in milk Food Chem. 141 2013 1980 1986
10. R. Kapoor, and J.S. Yadav Development of a species-specific colorimetric-PCR assay for detection and species differentiation of Mycobacterium immunogenum and Mycobacterium chelonae and its comparison with quantitative real-time PCR for field metalworking fluids Mol. Cell. Probe 23 2009 75 82
11. M.B. Gu, Y.S. Kim, J.H. Kim, L.A. Kim, and S.J. Lee Conformation- Independent competitive interaction dynamics in colorimetric aptasensor reactions for small molecules J. Biotechnol. 150S 2010 S37
12. X. Xiang, L. Chen, Q.G. Zhuang, X.H. Ji, and Z.K. He Real-time luminescence based colorimetric determination of double-strand DNA in droplet on demand Biosens. Bioelectron. 32 2012 43 49
13. A. Okudan, S. Erdemir, and O. Kocyigit 'Naked-eye' detection of fluoride and acetate anions by using simple and efficient urea and thiourea based colorimetric sensors J. Mol. Struct. 1048 2013 392 398
14. W. Wei, D.M. Zhang, L.H. Yin, Y.P. Pu, and S.Q. Liu Colorimetric detection of DNA damage by using hemin-graphene nanocomposites Spectrochim. Acta A: Mol. Biomol. Spectrosc. 106 2013 163 169
15. Y.L. Yuan, X.X. Gou, R. Yuan, Y.Q. Chai, Y. Zhuo, L. Mao, and X.X. Gan Electrochemical aptasensor based on the dual-amplification of G-quadruplex horseradish peroxidase-mimicking DNAzyme and blocking reagent-horseradish peroxidase Biosens. Bioelectron. 26 2011 4236 4240
16. D. Zhu, J.J. Luo, X.Y. Rao, J.J. Zhang, G.F. Cheng, P.G. He, and Y.Z. Fang A novel optical thrombin aptasensor based on magnetic nanoparticles and split DNAzyme Anal. Chim. Acta 711 2012 91 96
17. Z.J. Cao, Z.X. Li, Y.J. Zhao, Y.M. Song, and J.Z. Lu Magnetic bead-based chemiluminescence detection of sequence-specific DNA by using catalytic nucleic acid labels Anal. Chim. Acta 557 2006 152 158
18. B.L. Li, Y. Du, T. Li, and S.J. Dong Investigation of 3,3′,5,5′-tetramethyl-benzidine as colorimetric substrate for a peroxidatic DNAzyme Anal. Chim. Acta 651 2009 234 240
19. 3+-promoted G-quadruplex-hemin DNAzyme for the development of label-free visual biosensors Biosens. Bioelectron. 26 2011 4053 4057
20. J.B. Zhu, T. Li, L.B. Zhang, S.J. Dong, and E.K. Wang G-quadruplex DNAzyme based molecular catalytic beacon for label-free colorimetric logic gates Biomaterials 32 2011 7318 7324
21. S. Liu, J.Q. Tian, L. Wang, and X.P. Sun Highly sensitive and selective colorimetric detection of Ag(I) ion using 3,3′,5,5′,- tetramethylbenzidine (TMB) as an indicator Sens. Actuators B: Chem. 165 2012 44 47
22. D.J. Lin, J. Wu, F. Yan, S.Y. Deng, and H.X. Ju Ultrasensitive immunoassay of protein biomarker based on electrochemiluminescent quenching of quantum dots by hemin bio-bar-coded nanoparticle tags Anal. Chem. 83 2011 5214 5221
23. J. Kosman, and B. Juskowiak Peroxidase-mimicking DNAzymes for biosensing applications: a review Anal. Chim. Acta 707 2011 7 17
24. T. Li, E.K. Wang, and S.J. Dong G-quadruplex-based DNAzyme for facile colorimetric detection of thrombin Chem. Commun. 31 2008 3654 3656
25. X. Yang, T. Li, B.L. Li, and E.K. Wang Potassium-sensitive G-quadruplex DNA for sensitive visible potassium detection Analyst 135 2010 71 75
26. 2+ Sens. Actuators B: Chem. 191 2014 60 66
27. T.X. Yu, W. Cheng, Q. Li, C.H. Luo, L. Yan, D.C. Zhang, Y.B. Yin, and S.J. Ding Electrochemical immunosensor for competitive detection of neuron specific enolase using functional carbon nanotubes and gold nanoprobe Talanta 93 2012 433 438
28. Z.X. Zhou, W. Wei, Y.J. Zhang, and S.Q. Liu DNA-responsive disassembly of AuNP aggregates: influence of nonbase-paired regions and colorimetric DNA detection by exonuclease III aided amplification J. Mater. Chem. B 1 2013 2851 2858
29. K. Lee, V. Scardaci, H.Y. Kim, T. Hallam, H. Nolan, B.E. Bolf, G.S. Maltbie, J.E. Abbott, and G.S. Duesberg Highly sensitive, transparent, and flexible gas sensors based on gold nanoparticle decorated carbon nanotubes Sens. Actuators B: Chem. 188 2013 571 575
30. X.M. Li, P.Y. Fu, J.M. Liu, and S.S. Zhang Biosensor for multiplex detection of two DNA target sequences using enzyme-functionalized Au nanoparticles as signal amplification Anal. Chim. Acta 673 2010 133 138
31. D.C. Zhang, Y.R. Yan, Q. Li, T.X. Yu, W. Cheng, L. Wang, H.X. Ju, and S.J. Ding Label-free and high-sensitive detection of Salmonella using a surface plasmon resonance DNA-based biosensor J. Biotechnol. 160 2012 123 128
32. Q. Li, W. Cheng, D.C. Zhang, T.X. Yu, Y.B. Yin, H.X. Ju, and S.J. Ding Rapid and sensitive strategy for Salmonella detection using an InvA gene-based electrochemical DNA sensor Int. J. Electrochem. Sci. 7 2012 844 856
33. Q.P. Guo, Y.Y. Bao, X.H. Yang, K.M. Wang, Q. Wang, and Y.Y. Tan Amplified electrochemical DNA sensor using peroxidase-like DNAzyme Talanta 83 2010 500 504
34. X.H. Ding, H. Li, L. Deng, Z.H. Peng, H. Chen, and D. Wang A novel homogenous detection method based on the self-assembled DNAzyme labeled DNA probes with SWNT conjugates and its application in detecting pathogen Biosens. Bioelectron. 26 2011 4596 4600
35. R.R. Beumer, E. Brinkman, and F.M. Rombouts Enzyme-linked immunoassays for the detection of Salmonella spp.: a comparison with other methods Int. J. Food Microbiol. 12 1991 363 374
36. C.C. Liu, C.Y. Yeung, P.H. Chen, M.K. Yeh, and S.Y. Hou Salmonella detection using 16S ribosomal DNA/RNA probe-gold nanoparticles and lateral flow immunoassay Food Chem. 141 2013 2526 2532