메뉴 건너뛰기




Volumn 64, Issue PART 3, 2014, Pages 755-761

Rhodococcus defluvii sp. nov., isolated from wastewater of a bioreactor and formal proposal to reclassify [Corynebacterium hoagii] and Rhodococcus equi as Rhodococcus hoagii comb. nov

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CARDIOLIPIN; FATTY ACID; GLYCOLIPID; ISOPRENOID; MANNOSIDE; MENAQUINONE; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLINOSITOL; PHOSPHOLIPID; PHOSPHORUS; QUINONE DERIVATIVE; RNA 16S;

EID: 84896850140     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.053322-0     Document Type: Article
Times cited : (52)

References (43)
  • 2
    • 1842362290 scopus 로고
    • Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli
    • Brosius, J., Palmer, M. L., Kennedy, P. J. & Noller, H. F. (1978). Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci USA 75, 4801-4805.
    • (1978) Proc Natl Acad Sci USA , vol.75 , pp. 4801-4805
    • Brosius, J.1    Palmer, M.L.2    Kennedy, P.J.3    Noller, H.F.4
  • 3
    • 0020417101 scopus 로고
    • Reclassification of Bacterionema matruchotii (Mendel) in the genus Corynebacterium, as Corynebacterium matruchotii
    • Collins, M. D. (1982). Reclassification of Bacterionema matruchotii (Mendel) in the genus Corynebacterium, as Corynebacterium matruchotii. Zentralbl. Bakteriol. Hyg. 1 Abt. Orig. 3, 364-367.
    • (1982) Zentralbl. Bakteriol. Hyg. 1 Abt. Orig , vol.3 , pp. 364-367
    • Collins, M.D.1
  • 4
    • 0000251605 scopus 로고
    • Genus Corynebacterium
    • In Edited by P. H. A. Sneath, N. S. Mair, M. E. Sharp & J. G. Holt. Baltimore: Williams & Wilkins
    • Collins, M. D. & Cummins, C. S. (1986). Genus Corynebacterium. In Bergey's Manual of Systematic Bacteriology, vol. 2, 1266-1276. Edited by P. H. A. Sneath, N. S. Mair, M. E. Sharp & J. G. Holt. Baltimore: Williams & Wilkins.
    • (1986) Bergey's Manual of Systematic Bacteriology , vol.2 , pp. 1266-1276
    • Collins, M.D.1    Cummins, C.S.2
  • 5
    • 0019306204 scopus 로고
    • Lipids in the classification and identification of coryneform bacteria containing peptidoglycans based on 2,4-diaminobutyric acid
    • Collins, M. D. & Jones, D. (1980). Lipids in the classification and identification of coryneform bacteria containing peptidoglycans based on 2,4-diaminobutyric acid. J Appl Bacteriol 48, 459-470.
    • (1980) J Appl Bacteriol , vol.48 , pp. 459-470
    • Collins, M.D.1    Jones, D.2
  • 6
    • 0018387449 scopus 로고
    • Isoprenoid quinones in the classification of coryneform and related bacteria
    • Collins, M. D., Goodfellow, M. & Minnikin, D. E. (1977). Isoprenoid quinones in the classification of coryneform and related bacteria. J Gen Microbiol 110, 127-136.
    • (1977) J Gen Microbiol , vol.110 , pp. 127-136
    • Collins, M.D.1    Goodfellow, M.2    Minnikin, D.E.3
  • 7
    • 0020329628 scopus 로고
    • Reclassification of 'Corynebacterium haemolyticum' (MacLean, Liebow & Rosenberg) in the genus Arcanobacterium gen. nov. as Arcanobacterium haemolyticum nom. rev., comb. nov
    • Collins, M. D., Jones, D. & Schofield, G. M. (1982). Reclassification of 'Corynebacterium haemolyticum' (MacLean, Liebow & Rosenberg) in the genus Arcanobacterium gen. nov. as Arcanobacterium haemolyticum nom. rev., comb. nov. J Gen Microbiol 128, 1279-1281.
    • (1982) J Gen Microbiol , vol.128 , pp. 1279-1281
    • Collins, M.D.1    Jones, D.2    Schofield, G.M.3
  • 8
    • 0003437302 scopus 로고    scopus 로고
    • Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA
    • Felsenstein, J. (2005). PHYLIP (phylogeny inference package) version 3.67. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
    • (2005) PHYLIP (phylogeny inference package) version 3.67.
    • Felsenstein, J.1
  • 10
    • 0017646490 scopus 로고
    • The actinomycete-genus Rhodococcus: A home for the "rhodochrous" complex
    • Goodfellow, M. & Alderson, G. (1977). The actinomycete-genus Rhodococcus: a home for the "rhodochrous" complex. J Gen Microbiol 100, 99-122.
    • (1977) J Gen Microbiol , vol.100 , pp. 99-122
    • Goodfellow, M.1    Alderson, G.2
  • 11
    • 0020408745 scopus 로고
    • Numerical classification of Rhodococcus equi and related actinomycetes
    • Goodfellow, M., Beckham, A. R. & Barton, M. D. (1982). Numerical classification of Rhodococcus equi and related actinomycetes J Appl Bacteriol 53, 199-207.
    • (1982) J Appl Bacteriol , vol.53 , pp. 199-207
    • Goodfellow, M.1    Beckham, A.R.2    Barton, M.D.3
  • 12
    • 0035989424 scopus 로고    scopus 로고
    • Transfer of Tsukamurella wratislaviensis Goodfellow et al. 1995 to the genus Rhodococcus as Rhodococcus wratislaviensis comb. nov
    • Goodfellow, M., Chun, J., Stackebrandt, E. & Kroppenstedt, R. M. (2002). Transfer of Tsukamurella wratislaviensis Goodfellow et al. 1995 to the genus Rhodococcus as Rhodococcus wratislaviensis comb. nov. Int J Syst Evol Microbiol 52, 749-755.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 749-755
    • Goodfellow, M.1    Chun, J.2    Stackebrandt, E.3    Kroppenstedt, R.M.4
  • 13
    • 0030045573 scopus 로고    scopus 로고
    • Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall
    • Groth, I., Schumann, P., Weiss, N., Martin, K. & Rainey, F. A. (1996). Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234-239.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 234-239
    • Groth, I.1    Schumann, P.2    Weiss, N.3    Martin, K.4    Rainey, F.A.5
  • 14
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon, S. & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 15
    • 0021255516 scopus 로고
    • Rhodococcus marinonascens sp. nov., an actinomycete from the sea
    • Helmke, E. & Weyland, H. (1984). Rhodococcus marinonascens sp. nov., an actinomycete from the sea. Int J Syst Bacteriol 34, 127-138.
    • (1984) Int J Syst Bacteriol , vol.34 , pp. 127-138
    • Helmke, E.1    Weyland, H.2
  • 16
    • 84878872518 scopus 로고    scopus 로고
    • Genus IV. Rhodococcus
    • In 2nd edn, The Actinobacteria Part A, Edited by Edited by M. Goodfellow, P. Kämpfer, H.-J. Busse, M. E. Trujillo, K. Suzuki, W. Ludwig & W. B. Whitman. New York: Springer
    • Jones, A. L. & Goodfellow, M. (2012). Genus IV. Rhodococcus. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 5, The Actinobacteria, Part A, pp. 437-464. Edited by Edited by M. Goodfellow, P. Kämpfer, H.-J. Busse, M. E. Trujillo, K. Suzuki, W. Ludwig & W. B. Whitman. New York: Springer.
    • (2012) Bergey's Manual of Systematic Bacteriology , vol.5 , pp. 437-464
    • Jones, A.L.1    Goodfellow, M.2
  • 17
    • 84878271960 scopus 로고    scopus 로고
    • Prescottia equi gen. nov., comb. nov.: A new home for an old pathogen
    • Jones, A. L., Sutcliffe, I. C. & Goodfellow, M. (2013a). Prescottia equi gen. nov., comb. nov.: a new home for an old pathogen. Antonie van Leeuwenhoek 103, 655-671.
    • (2013) Antonie van Leeuwenhoek , vol.103 , pp. 655-671
    • Jones, A.L.1    Sutcliffe, I.C.2    Goodfellow, M.3
  • 18
    • 84878315865 scopus 로고    scopus 로고
    • Proposal to replace the illegitimate genus name Prescottia Jones et al. 2013 with the genus name Prescottella gen. nov. and to replace the illegitimate combination Prescottia equi Jones et al. 2013 with Prescottella equi comb. nov
    • Jones, A. L., Sutcliffe, I. C. & Goodfellow, M. (2013b). Proposal to replace the illegitimate genus name Prescottia Jones et al. 2013 with the genus name Prescottella gen. nov. and to replace the illegitimate combination Prescottia equi Jones et al. 2013 with Prescottella equi comb. nov. Antonie van Leeuwenhoek 103, 1405-1407.
    • (2013) Antonie van Leeuwenhoek , vol.103 , pp. 1405-1407
    • Jones, A.L.1    Sutcliffe, I.C.2    Goodfellow, M.3
  • 19
    • 0000732090 scopus 로고
    • Evolution of the protein molecules
    • In Edited by H. N. Munro. New York: Academic Press
    • Jukes, T. H. & Cantor, C. R. (1969). Evolution of the protein molecules. In Mammalian Protein Metabolism, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 20
    • 0029799185 scopus 로고    scopus 로고
    • Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa
    • Kämpfer, P. & Kroppenstedt, R. M. (1996). Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42, 989-1005.
    • (1996) Can J Microbiol , vol.42 , pp. 989-1005
    • Kämpfer, P.1    Kroppenstedt, R.M.2
  • 21
    • 51249170746 scopus 로고
    • Microbiological characterization of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria
    • Kämpfer, P., Steiof, M. & Dott, W. (1991). Microbiological characterization of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria. Microb Ecol 21, 227-251.
    • (1991) Microb Ecol , vol.21 , pp. 227-251
    • Kämpfer, P.1    Steiof, M.2    Dott, W.3
  • 22
    • 0028598687 scopus 로고
    • Rhodococcus opacus sp. nov., an unusual nutritionally versatile Rhodococcusspecies
    • Klatte, S., Kroppenstedt, R. M. & Rainey, F. A. (1994b). Rhodococcus opacus sp. nov., an unusual nutritionally versatile Rhodococcusspecies. Syst Appl Microbiol 17, 355-360.
    • (1994) Syst Appl Microbiol , vol.17 , pp. 355-360
    • Klatte, S.1    Kroppenstedt, R.M.2    Rainey, F.A.3
  • 23
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • In Edited by E. Stackebrandt & M. Goodfellow. New York: Wiley
    • Lane, D. J. (1991). 16S/23S rRNA sequencing. In Nucleic Acid Techniques in Bacterial Systematics, pp. 115-175. Edited by E. Stackebrandt & M. Goodfellow. New York: Wiley.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 24
    • 0002044672 scopus 로고
    • Chemical composition as a criterion in the classification of aerobic actinomycetes
    • Lechevalier, M. P. & Lechevalier, H. (1970). Chemical composition as a criterion in the classification of aerobic actinomycetes. Int J Syst Bacteriol 20, 435-443.
    • (1970) Int J Syst Bacteriol , vol.20 , pp. 435-443
    • Lechevalier, M.P.1    Lechevalier, H.2
  • 25
    • 2942665960 scopus 로고    scopus 로고
    • Rothia aeria sp. nov., Rhodococcus baikonurensis sp. nov. and Arthrobacter russicus sp. nov., isolated from air in the Russian space laboratoryMir
    • Li, Y., Kawamura, Y., Fujiwara, N., Naka, T., Liu, H., Huang, X., Kobayashi, K. & Ezaki, T. (2004). Rothia aeria sp. nov., Rhodococcus baikonurensis sp. nov. and Arthrobacter russicus sp. nov., isolated from air in the Russian space laboratoryMir. Int J Syst EvolMicrobiol 54, 827-835.
    • (2004) Int J Syst EvolMicrobiol , vol.54 , pp. 827-835
    • Li, Y.1    Kawamura, Y.2    Fujiwara, N.3    Naka, T.4    Liu, H.5    Huang, X.6    Kobayashi, K.7    Ezaki, T.8
  • 27
    • 0002911873 scopus 로고
    • Spezifische infektiose Pneumonie beim Fohlen. Ein neuer Entreneger beim Pferde
    • 1923 (in German)
    • Magnusson, H. (1923). Spezifische infektiose Pneumonie beim Fohlen. Ein neuer Entreneger beim Pferde. Archiv fur wissenschaftliche u. praktische Tierheilkunde, 1923, 50, 22-38 (in German).
    • (1923) Archiv fur wissenschaftliche u. praktische Tierheilkunde , vol.50 , pp. 22-38
    • Magnusson, H.1
  • 28
    • 77949353651 scopus 로고    scopus 로고
    • Promicromonospora umidemergens sp. nov., isolated from moisture from indoor wall material
    • Martin, K., Schäfer, J. & Kämpfer, P. (2010). Promicromonospora umidemergens sp. nov., isolated from moisture from indoor wall material. Int J Syst Evol Microbiol 60, 537-541.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 537-541
    • Martin, K.1    Schäfer, J.2    Kämpfer, P.3
  • 30
    • 0016684892 scopus 로고
    • Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates
    • Minnikin, D. E., Alshamaony, L. & Goodfellow, M. (1975). Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates. J Gen Microbiol 88, 200-204.
    • (1975) J Gen Microbiol , vol.88 , pp. 200-204
    • Minnikin, D.E.1    Alshamaony, L.2    Goodfellow, M.3
  • 31
    • 0018393563 scopus 로고
    • Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa
    • Minnikin, D. E., Collins, M. D. & Goodfellow, M. (1979). Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa. J Appl Bacteriol 47, 87-95.
    • (1979) J Appl Bacteriol , vol.47 , pp. 87-95
    • Minnikin, D.E.1    Collins, M.D.2    Goodfellow, M.3
  • 32
    • 84896865185 scopus 로고
    • A study of the diphtheria group of organisms by the biometrical method
    • Morse, M. E. (1912). A study of the diphtheria group of organisms by the biometrical method. J Infect Dis 11, 253-285.
    • (1912) J Infect Dis , vol.11 , pp. 253-285
    • Morse, M.E.1
  • 33
    • 0024553747 scopus 로고
    • Rapid extraction of bacterial genomic DNA with guanidium thiocyanate
    • Pitcher, D. G., Saunders, N. A. & Owen, R. J. (1989). Rapid extraction of bacterial genomic DNA with guanidium thiocyanate. Lett Appl Microbiol 8, 151-156.
    • (1989) Lett Appl Microbiol , vol.8 , pp. 151-156
    • Pitcher, D.G.1    Saunders, N.A.2    Owen, R.J.3
  • 34
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: A comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse, E., Quast, C., Knittel, K., Fuchs, B. M., Ludwig, W., Peplies, J. & Glöckner, F. O. (2007). SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35, 7188-7196.
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.M.4    Ludwig, W.5    Peplies, J.6    Glöckner, F.O.7
  • 36
    • 0019468642 scopus 로고
    • Deoxyribonucleic acid homologies among coryneform bacteria
    • Suzuki, K., Kaneko, T. & Komagata, K. (1981). Deoxyribonucleic acid homologies among coryneform bacteria. Int J Syst Bacteriol 31, 131-138.
    • (1981) Int J Syst Bacteriol , vol.31 , pp. 131-138
    • Suzuki, K.1    Kaneko, T.2    Komagata, K.3
  • 39
    • 84874333859 scopus 로고    scopus 로고
    • Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names
    • other authors
    • Yarza, P., Spröer, C., Swiderski, J., Mrotzek, N., Spring, S., Tindall, B. J., Gronow, S., Pukall, R., Klenk, H. P. & other authors (2013). Sequencing orphan species initiative (SOS): Filling the gaps in the 16S rRNA gene sequence database for all species with validly published names. Syst Appl Microbiol 36, 69-73.
    • (2013) Syst Appl Microbiol , vol.36 , pp. 69-73
    • Yarza, P.1    Spröer, C.2    Swiderski, J.3    Mrotzek, N.4    Spring, S.5    Tindall, B.J.6    Gronow, S.7    Pukall, R.8    Klenk, H.P.9
  • 41
  • 43
    • 0345628032 scopus 로고    scopus 로고
    • Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov
    • Ziemke, F., Höfle, M. G., Lalucat, J. & Rosselló-Mora, R. (1998). Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48, 179-186.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 179-186
    • Ziemke, F.1    Höfle, M.G.2    Lalucat, J.3    Rosselló-Mora, R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.