메뉴 건너뛰기




Volumn 30, Issue 9, 2014, Pages 2429-2440

Modeling cell membrane perturbation by molecules designed for transmembrane electron transfer

Author keywords

[No Author keywords available]

Indexed keywords

BIO-ELECTROCHEMICAL SYSTEMS; BIOLOGICAL FUNCTIONS; CONJUGATED OLIGOELECTROLYTES; FLUORINE SUBSTITUTION; MEMBRANE THICKNESS; MINIMUM INHIBITORY CONCENTRATION; POLAR INTERACTIONS; TRANSMEMBRANE ELECTRON TRANSFER;

EID: 84896794132     PISSN: 07437463     EISSN: 15205827     Source Type: Journal    
DOI: 10.1021/la403409t     Document Type: Article
Times cited : (51)

References (49)
  • 1
    • 77950937081 scopus 로고    scopus 로고
    • Insight into the mechanism of antimicrobial conjugated polyelectrolytes: Lipid headgroup charge and membrane fluidity effects
    • Ding, L.; Chi, E. Y.; Schanze, K. S.; Lopez, G. P.; Whitten, D. G. Insight into the mechanism of antimicrobial conjugated polyelectrolytes: Lipid headgroup charge and membrane fluidity effects Langmuir 2010, 26, 5544-5550
    • (2010) Langmuir , vol.26 , pp. 5544-5550
    • Ding, L.1    Chi, E.Y.2    Schanze, K.S.3    Lopez, G.P.4    Whitten, D.G.5
  • 2
    • 77955811505 scopus 로고    scopus 로고
    • Modification of the optoelectronic properties of membranes via insertion of amphiphilic phenylenevinylene oligoelectrolytes
    • Garner, L. E.; Park, J.; Dyar, S. M.; Chworos, A.; Sumner, J. J.; Bazan, G. C. Modification of the optoelectronic properties of membranes via insertion of amphiphilic phenylenevinylene oligoelectrolytes J. Am. Chem. Soc. 2010, 132, 10042-10052
    • (2010) J. Am. Chem. Soc. , vol.132 , pp. 10042-10052
    • Garner, L.E.1    Park, J.2    Dyar, S.M.3    Chworos, A.4    Sumner, J.J.5    Bazan, G.C.6
  • 3
    • 84867770502 scopus 로고    scopus 로고
    • Molecular dynamics simulation study of the interaction of cationic biocides with lipid bilayers: Aggregation effects and bilayer damage
    • Hill, E. H.; Stratton, K.; Whitten, D. G.; Evans, D. G. Molecular dynamics simulation study of the interaction of cationic biocides with lipid bilayers: Aggregation effects and bilayer damage Langmuir 2012, 28, 14849-14854
    • (2012) Langmuir , vol.28 , pp. 14849-14854
    • Hill, E.H.1    Stratton, K.2    Whitten, D.G.3    Evans, D.G.4
  • 5
    • 84862908622 scopus 로고    scopus 로고
    • Direct visualization of bactericidal action of cationic conjugated polyelectrolytes and oligomers
    • Wang, Y.; Corbitt, T. S.; Jett, S. D.; Tang, Y.; Schanze, K. S.; Chi, E. Y.; Whitten, D. G. Direct visualization of bactericidal action of cationic conjugated polyelectrolytes and oligomers Langmuir 2011, 28, 65-70
    • (2011) Langmuir , vol.28 , pp. 65-70
    • Wang, Y.1    Corbitt, T.S.2    Jett, S.D.3    Tang, Y.4    Schanze, K.S.5    Chi, E.Y.6    Whitten, D.G.7
  • 6
    • 0042734451 scopus 로고    scopus 로고
    • Cationic antimicrobial peptides
    • Bradshaw, J. Cationic antimicrobial peptides BioDrugs 2003, 17, 233-240
    • (2003) BioDrugs , vol.17 , pp. 233-240
    • Bradshaw, J.1
  • 7
    • 84864645871 scopus 로고    scopus 로고
    • Membrane activity of antimicrobial phenylene ethynylene based polymers and oligomers
    • Wang, Y.; Chi, E. Y.; Schanze, K. S.; Whitten, D. G. Membrane activity of antimicrobial phenylene ethynylene based polymers and oligomers Soft Matter 2012, 8, 8547-8558
    • (2012) Soft Matter , vol.8 , pp. 8547-8558
    • Wang, Y.1    Chi, E.Y.2    Schanze, K.S.3    Whitten, D.G.4
  • 10
    • 77956440890 scopus 로고    scopus 로고
    • Identification of bacteria by conjugated oligoelectrolyte/single-stranded DNA electrostatic complexes
    • Duarte, A.; Chworos, A.; Flagan, S. F.; Hanrahan, G.; Bazan, G. C. Identification of bacteria by conjugated oligoelectrolyte/single-stranded DNA electrostatic complexes J. Am. Chem. Soc. 2010, 132, 12562-12564
    • (2010) J. Am. Chem. Soc. , vol.132 , pp. 12562-12564
    • Duarte, A.1    Chworos, A.2    Flagan, S.F.3    Hanrahan, G.4    Bazan, G.C.5
  • 12
    • 4544316921 scopus 로고    scopus 로고
    • The polar hydrophobicity of fluorinated compounds
    • Biffinger, J. C.; Kim, H. W.; DiMagno, S. G. The polar hydrophobicity of fluorinated compounds ChemBioChem 2004, 5, 622-627
    • (2004) ChemBioChem , vol.5 , pp. 622-627
    • Biffinger, J.C.1    Kim, H.W.2    Dimagno, S.G.3
  • 13
  • 15
    • 84862150922 scopus 로고    scopus 로고
    • Molecular dynamics unlocks atomic level self-assembly of the exopolysaccharide matrix of water-treatment granular biofilms
    • Seviour, T.; Malde, A. K.; Kjelleberg, S.; Yuan, Z.; Mark, A. E. Molecular dynamics unlocks atomic level self-assembly of the exopolysaccharide matrix of water-treatment granular biofilms Biomacromolecules 2012, 13, 1965-1972
    • (2012) Biomacromolecules , vol.13 , pp. 1965-1972
    • Seviour, T.1    Malde, A.K.2    Kjelleberg, S.3    Yuan, Z.4    Mark, A.E.5
  • 17
    • 4444282928 scopus 로고    scopus 로고
    • A biomolecular force field based on the free enthalpy of hydration and solvation: The Gromos force-field parameter sets 53a5 and 53a6
    • Oostenbrink, C.; Villa, A.; Mark, A. E.; Van Gunsteren, W. F. A biomolecular force field based on the free enthalpy of hydration and solvation: The Gromos force-field parameter sets 53a5 and 53a6 J. Comput. Chem. 2004, 25, 1656-1676
    • (2004) J. Comput. Chem. , vol.25 , pp. 1656-1676
    • Oostenbrink, C.1    Villa, A.2    Mark, A.E.3    Van Gunsteren, W.F.4
  • 18
    • 69949118458 scopus 로고    scopus 로고
    • Packmol: A package for building initial configurations for molecular dynamics simulations
    • Martínez, L.; Andrade, R.; Birgin, E. G.; Martínez, J. M. Packmol: A package for building initial configurations for molecular dynamics simulations J. Comput. Chem. 2009, 30, 2157-2164
    • (2009) J. Comput. Chem. , vol.30 , pp. 2157-2164
    • Martínez, L.1    Andrade, R.2    Birgin, E.G.3    Martínez, J.M.4
  • 19
    • 65249151900 scopus 로고    scopus 로고
    • Lipid models for united-atom molecular dynamics simulations of proteins
    • Kukol, A. Lipid models for united-atom molecular dynamics simulations of proteins J. Chem. Theory Comput. 2009, 5, 615-626
    • (2009) J. Chem. Theory Comput. , vol.5 , pp. 615-626
    • Kukol, A.1
  • 20
    • 80855139866 scopus 로고    scopus 로고
    • Electroporation of the E coli and S aureus membranes: Molecular dynamics simulations of complex bacterial membranes
    • Piggot, T. J.; Holdbrook, D. A.; Khalid, S. Electroporation of the E. coli and S. aureus membranes: Molecular dynamics simulations of complex bacterial membranes J. Phys. Chem. B 2011, 115, 13381-13388
    • (2011) J. Phys. Chem. B , vol.115 , pp. 13381-13388
    • Piggot, T.J.1    Holdbrook, D.A.2    Khalid, S.3
  • 22
    • 46249092554 scopus 로고    scopus 로고
    • Gromacs 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation
    • Hess, B.; Kutzner, C.; van der Spoel, D.; Lindahl, E. Gromacs 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation J. Chem. Theory Comput. 2008, 4, 435-447
    • (2008) J. Chem. Theory Comput. , vol.4 , pp. 435-447
    • Hess, B.1    Kutzner, C.2    Van Der Spoel, D.3    Lindahl, E.4
  • 23
    • 0035789518 scopus 로고    scopus 로고
    • Gromacs 3.0: A package for molecular simulation and trajectory analysis
    • Lindahl, E.; Hess, B.; van der Spoel, D. Gromacs 3.0: A package for molecular simulation and trajectory analysis J. Mol. Model. 2001, 7, 306-317
    • (2001) J. Mol. Model. , vol.7 , pp. 306-317
    • Lindahl, E.1    Hess, B.2    Van Der Spoel, D.3
  • 27
    • 0019707626 scopus 로고
    • Polymorphic transitions in single-crystals - A new molecular-dynamics method
    • Parrinello, M.; Rahman, A. Polymorphic transitions in single-crystals-a new molecular-dynamics method J. Appl. Phys. 1981, 52, 7182-7190
    • (1981) J. Appl. Phys. , vol.52 , pp. 7182-7190
    • Parrinello, M.1    Rahman, A.2
  • 28
    • 0035424713 scopus 로고    scopus 로고
    • Efficient multiple time step method for use with ewald and particle mesh ewald for large biomolecular systems
    • Zhou, R. H.; Harder, E.; Xu, H. F.; Berne, B. J. Efficient multiple time step method for use with ewald and particle mesh ewald for large biomolecular systems J. Chem. Phys. 2001, 115, 2348-2358
    • (2001) J. Chem. Phys. , vol.115 , pp. 2348-2358
    • Zhou, R.H.1    Harder, E.2    Xu, H.F.3    Berne, B.J.4
  • 29
    • 0000388705 scopus 로고    scopus 로고
    • Lincs: A linear constraint solver for molecular simulations
    • Hess, B.; Bekker, H.; Berendsen, H. J. C.; Fraaije, J. Lincs: A linear constraint solver for molecular simulations J. Comput. Chem. 1997, 18, 1463-1472
    • (1997) J. Comput. Chem. , vol.18 , pp. 1463-1472
    • Hess, B.1    Bekker, H.2    Berendsen, H.J.C.3    Fraaije, J.4
  • 31
    • 38349091489 scopus 로고    scopus 로고
    • Well-tempered metadynamics: A smoothly converging and tunable free-energy method
    • Barducci, A.; Bussi, G.; Parrinello, M. Well-tempered metadynamics: A smoothly converging and tunable free-energy method Phys. Rev. Lett. 2008, 100, 020603
    • (2008) Phys. Rev. Lett. , vol.100 , pp. 020603
    • Barducci, A.1    Bussi, G.2    Parrinello, M.3
  • 32
    • 65549083717 scopus 로고    scopus 로고
    • Gridmat-md: A grid-based membrane analysis tool for use with molecular dynamics
    • Allen, W. J.; Lemkul, J. A.; Bevan, D. R. Gridmat-md: A grid-based membrane analysis tool for use with molecular dynamics J. Comput. Chem. 2009, 30, 1952-1958
    • (2009) J. Comput. Chem. , vol.30 , pp. 1952-1958
    • Allen, W.J.1    Lemkul, J.A.2    Bevan, D.R.3
  • 33
    • 39449086721 scopus 로고    scopus 로고
    • Agar and broth dilution methods to determine the minimal inhibitory concentration (mic) of antimicrobial substances
    • Wiegand, I.; Hilpert, K.; Hancock, R. E. Agar and broth dilution methods to determine the minimal inhibitory concentration (mic) of antimicrobial substances Nat. Protoc. 2008, 3, 163-175
    • (2008) Nat. Protoc. , vol.3 , pp. 163-175
    • Wiegand, I.1    Hilpert, K.2    Hancock, R.E.3
  • 34
    • 33845355220 scopus 로고    scopus 로고
    • Bactericidal agents in the treatment of mrsa infections - The potential role of daptomycin
    • French, G. L. Bactericidal agents in the treatment of mrsa infections-the potential role of daptomycin J. Antimicrob. Chemother. 2006, 58, 1107-1117
    • (2006) J. Antimicrob. Chemother. , vol.58 , pp. 1107-1117
    • French, G.L.1
  • 36
    • 68949116150 scopus 로고    scopus 로고
    • Alternative mechanisms for the interaction of the cell-penetrating peptides penetratin and the tat peptide with lipid bilayers
    • Yesylevskyy, S.; Marrink, S.-J.; Mark, A. E. Alternative mechanisms for the interaction of the cell-penetrating peptides penetratin and the tat peptide with lipid bilayers Biophys. J. 2009, 97, 40-49
    • (2009) Biophys. J. , vol.97 , pp. 40-49
    • Yesylevskyy, S.1    Marrink, S.-J.2    Mark, A.E.3
  • 39
    • 0029594533 scopus 로고
    • Membrane thinning caused by magainin 2
    • Ludtke, S.; He, K.; Huang, H. Membrane thinning caused by magainin 2 Biochemistry 1995, 34, 16764-16769
    • (1995) Biochemistry , vol.34 , pp. 16764-16769
    • Ludtke, S.1    He, K.2    Huang, H.3
  • 40
    • 0037381939 scopus 로고    scopus 로고
    • Molecular dynamics simulations of phospholipid bilayers with cholesterol
    • Hofsass, C.; Lindahl, E.; Edholm, O. Molecular dynamics simulations of phospholipid bilayers with cholesterol Biophys. J. 2003, 84, 2192-2206
    • (2003) Biophys. J. , vol.84 , pp. 2192-2206
    • Hofsass, C.1    Lindahl, E.2    Edholm, O.3
  • 42
    • 38049156027 scopus 로고    scopus 로고
    • Molecular dynamics simulations suggest a mechanism for translocation of the hiv-1 tat peptide across lipid membranes
    • Herce, H. D.; Garcia, A. E. Molecular dynamics simulations suggest a mechanism for translocation of the hiv-1 tat peptide across lipid membranes Proc. Natl. Acad. Sci. U. S. A. 2007, 104, 20805-20810
    • (2007) Proc. Natl. Acad. Sci. U. S. A. , vol.104 , pp. 20805-20810
    • Herce, H.D.1    Garcia, A.E.2
  • 44
    • 84867770502 scopus 로고    scopus 로고
    • Molecular dynamics simulation study of the interaction of cationic biocides with lipid bilayers: Aggregation effects and bilayer damage
    • Hill, E. H.; Stratton, K.; Whitten, D. G.; Evans, D. G. Molecular dynamics simulation study of the interaction of cationic biocides with lipid bilayers: Aggregation effects and bilayer damage Langmuir 2012, 28, 14849-14854
    • (2012) Langmuir , vol.28 , pp. 14849-14854
    • Hill, E.H.1    Stratton, K.2    Whitten, D.G.3    Evans, D.G.4
  • 47
    • 79953895968 scopus 로고    scopus 로고
    • Light-induced antibacterial activity of symmetrical and asymmetrical oligophenylene ethynylenes
    • Tang, Y.; Corbitt, T. S.; Parthasarathy, A.; Zhou, Z.; Schanze, K. S.; Whitten, D. G. Light-induced antibacterial activity of symmetrical and asymmetrical oligophenylene ethynylenes Langmuir 2011, 27, 4956-4962
    • (2011) Langmuir , vol.27 , pp. 4956-4962
    • Tang, Y.1    Corbitt, T.S.2    Parthasarathy, A.3    Zhou, Z.4    Schanze, K.S.5    Whitten, D.G.6
  • 48
    • 77953810854 scopus 로고    scopus 로고
    • High-resolution atomic force microscopic imaging of escherichia coli immobilized on mica surface
    • Udomrat, S.; Praparn, S.; Puntheeranurak, T. High-resolution atomic force microscopic imaging of escherichia coli immobilized on mica surface J. Microsc. Soc. Thailand 2009, 23, 38-41
    • (2009) J. Microsc. Soc. Thailand , vol.23 , pp. 38-41
    • Udomrat, S.1    Praparn, S.2    Puntheeranurak, T.3
  • 49
    • 84858797510 scopus 로고    scopus 로고
    • Design and characterization of novel hybrid antimicrobial peptides based on cecropin a, ll-37 and magainin ii
    • Fox, M. A.; Thwaite, J. E.; Ulaeto, D. O.; Atkins, T. P.; Atkins, H. S. Design and characterization of novel hybrid antimicrobial peptides based on cecropin a, ll-37 and magainin ii Peptides 2012, 33, 197-205
    • (2012) Peptides , vol.33 , pp. 197-205
    • Fox, M.A.1    Thwaite, J.E.2    Ulaeto, D.O.3    Atkins, T.P.4    Atkins, H.S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.