-
1
-
-
71949112756
-
Molecular and morphological methods for identifying plankton: what makes a successful marriage?
-
McManus GB, Katz LA. Molecular and morphological methods for identifying plankton: what makes a successful marriage?. J Plankton Res 2009, 31:1119-1129.
-
(2009)
J Plankton Res
, vol.31
, pp. 1119-1129
-
-
McManus, G.B.1
Katz, L.A.2
-
2
-
-
0344441394
-
Cryptic speciation on the high seas; global phylogenetics of the copepod family Eucalanidae
-
10.1098/rspb.2003.2505, 1691510, 14667347
-
Goetze E. Cryptic speciation on the high seas; global phylogenetics of the copepod family Eucalanidae. Proc R Soc B 2003, 270:2321-2331. 10.1098/rspb.2003.2505, 1691510, 14667347.
-
(2003)
Proc R Soc B
, vol.270
, pp. 2321-2331
-
-
Goetze, E.1
-
3
-
-
84871125681
-
Barcoding against a paradox? Combined molecular species delineations reveal multiple cryptic lineages in elusive meiofaunal sea slugs
-
10.1186/1471-2148-12-245, 3573953, 23244441
-
Jörger KM, Norenburg JL, Wilson NG, Schrödl M. Barcoding against a paradox? Combined molecular species delineations reveal multiple cryptic lineages in elusive meiofaunal sea slugs. BMC Evol Biol 2012, 12:245. 10.1186/1471-2148-12-245, 3573953, 23244441.
-
(2012)
BMC Evol Biol
, vol.12
, pp. 245
-
-
Jörger, K.M.1
Norenburg, J.L.2
Wilson, N.G.3
Schrödl, M.4
-
4
-
-
34548136909
-
Multiple lineages and absence of panmixia in the " circumpolar" crinoid Promachocrinus kerguelensis from the Atlantic sector of Antarctica
-
Wilson NG, Hunter RL, Lockhart SJ, Halanych KM. Multiple lineages and absence of panmixia in the " circumpolar" crinoid Promachocrinus kerguelensis from the Atlantic sector of Antarctica. Mar Biol 2007, 152:895-904.
-
(2007)
Mar Biol
, vol.152
, pp. 895-904
-
-
Wilson, N.G.1
Hunter, R.L.2
Lockhart, S.J.3
Halanych, K.M.4
-
5
-
-
0027332730
-
Sibling Species in the Sea
-
Knowlton N. Sibling Species in the Sea. Annu Rev Ecol Syst 1993, 24:189-216.
-
(1993)
Annu Rev Ecol Syst
, vol.24
, pp. 189-216
-
-
Knowlton, N.1
-
6
-
-
0034474483
-
Pelagic species diversity, biogeography, and evolution
-
Norris RD. Pelagic species diversity, biogeography, and evolution. Paleobiology 2000, 26:236-258.
-
(2000)
Paleobiology
, vol.26
, pp. 236-258
-
-
Norris, R.D.1
-
7
-
-
2442651379
-
Pseudo-cryptic speciation in coccolithophores
-
10.1073/pnas.1132069100, 165847, 12759476
-
Sáez AG, Probert I, Geisen M, Quinn P, Young JR, Medlin LK. Pseudo-cryptic speciation in coccolithophores. Proc Natl Acad Sci U S A 2003, 100:7163-7168. 10.1073/pnas.1132069100, 165847, 12759476.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 7163-7168
-
-
Sáez, A.G.1
Probert, I.2
Geisen, M.3
Quinn, P.4
Young, J.R.5
Medlin, L.K.6
-
8
-
-
79952110586
-
Larval Dispersal and Marine Population Connectivity
-
Cowen RK, Sponaugle S. Larval Dispersal and Marine Population Connectivity. Annu Rev Mar Sci 2009, 1:443-466.
-
(2009)
Annu Rev Mar Sci
, vol.1
, pp. 443-466
-
-
Cowen, R.K.1
Sponaugle, S.2
-
9
-
-
0034652521
-
Molecular genetic analyses of species boundaries in the sea
-
Knowlton N. Molecular genetic analyses of species boundaries in the sea. Hydrobiologia 2000, 420:73-90.
-
(2000)
Hydrobiologia
, vol.420
, pp. 73-90
-
-
Knowlton, N.1
-
10
-
-
78650171235
-
A " Rosetta Stone" for metazoan zooplankton: DNA barcode analysis of species diversity of the Sargasso Sea (Northwest Atlantic Ocean)
-
Bucklin A, Ortman BD, Jennings RM, Nigro LM, Sweetman CJ, Copley NJ, Sutton T, Wiebe PH. A " Rosetta Stone" for metazoan zooplankton: DNA barcode analysis of species diversity of the Sargasso Sea (Northwest Atlantic Ocean). Deep-Sea Res II 2010, 57:2234-2247.
-
(2010)
Deep-Sea Res II
, vol.57
, pp. 2234-2247
-
-
Bucklin, A.1
Ortman, B.D.2
Jennings, R.M.3
Nigro, L.M.4
Sweetman, C.J.5
Copley, N.J.6
Sutton, T.7
Wiebe, P.H.8
-
11
-
-
84866278568
-
Global phylogeography of the deep-sea pelagic chaetognath Eukrohnia hamata
-
Miyamoto H, Machida RJ, Nishida S. Global phylogeography of the deep-sea pelagic chaetognath Eukrohnia hamata. Prog Oceanogr 2012, 104:99-109.
-
(2012)
Prog Oceanogr
, vol.104
, pp. 99-109
-
-
Miyamoto, H.1
Machida, R.J.2
Nishida, S.3
-
12
-
-
3843111324
-
Phylogeography of the planktonic chaetognath Sagitta setosa reveals isolation in European Seas
-
Peijnenburg KTCA, Breeuwer JAJ, Pierrot-Bults AC, Menken SBJ. Phylogeography of the planktonic chaetognath Sagitta setosa reveals isolation in European Seas. Evolution 2004, 58:1472-1487.
-
(2004)
Evolution
, vol.58
, pp. 1472-1487
-
-
Peijnenburg, K.T.C.A.1
Breeuwer, J.A.J.2
Pierrot-Bults, A.C.3
Menken, S.B.J.4
-
14
-
-
36248953914
-
Species delimitation: new approaches for discovering diversity
-
10.1080/10635150701748506, 18027280
-
Wiens JJ. Species delimitation: new approaches for discovering diversity. Syst Biol 2007, 56:875-878. 10.1080/10635150701748506, 18027280.
-
(2007)
Syst Biol
, vol.56
, pp. 875-878
-
-
Wiens, J.J.1
-
15
-
-
79955561412
-
JMOTU and Taxonerator: Turning DNA barcode sequences into annotated operational taxonomic units
-
10.1371/journal.pone.0019259, 3081837, 21541350
-
Jones M, Ghoorah A, Blaxter ML. jMOTU and Taxonerator: Turning DNA barcode sequences into annotated operational taxonomic units. PLoS ONE 2011, 6:e19259. 10.1371/journal.pone.0019259, 3081837, 21541350.
-
(2011)
PLoS ONE
, vol.6
-
-
Jones, M.1
Ghoorah, A.2
Blaxter, M.L.3
-
16
-
-
34548444940
-
Sequence-based species delimitation for the DNA taxonomy of undescribed insects
-
10.1080/10635150600852011, 16967577
-
Pons J, Barraclough T, Gomez-Zurita J, Cardoso A, Duran D, Hazell S, Kamoun S, Sumlin W, Vogler AP. Sequence-based species delimitation for the DNA taxonomy of undescribed insects. Syst Biol 2006, 55:595-609. 10.1080/10635150600852011, 16967577.
-
(2006)
Syst Biol
, vol.55
, pp. 595-609
-
-
Pons, J.1
Barraclough, T.2
Gomez-Zurita, J.3
Cardoso, A.4
Duran, D.5
Hazell, S.6
Kamoun, S.7
Sumlin, W.8
Vogler, A.P.9
-
17
-
-
84859589467
-
ABGD, Automatic Barcode Gap Discovery for primary species delimitation
-
Puillandre N, Lambert A, Brouillet S, Achaz G. ABGD, Automatic Barcode Gap Discovery for primary species delimitation. Mol Ecol 1864-1877, 2012:21.
-
(1864)
Mol Ecol
, vol.2012
, pp. 21
-
-
Puillandre, N.1
Lambert, A.2
Brouillet, S.3
Achaz, G.4
-
18
-
-
33947104905
-
Statistical tests for taxonomic distinctiveness from observations of monophyly
-
10.1111/j.1558-5646.2007.00023.x, 17348942
-
Rosenberg NA. Statistical tests for taxonomic distinctiveness from observations of monophyly. Evolution 2007, 61:317-323. 10.1111/j.1558-5646.2007.00023.x, 17348942.
-
(2007)
Evolution
, vol.61
, pp. 317-323
-
-
Rosenberg, N.A.1
-
19
-
-
78650171417
-
Mesozooplankton distribution in the Spermonde Archipelago (Indonesia, Sulawesi) with special reference to the Calanoida (Copepoda)
-
Cornils A, Schulz J, Schmitt P, Lanuru M, Richter C, Schnack-Schiel SB. Mesozooplankton distribution in the Spermonde Archipelago (Indonesia, Sulawesi) with special reference to the Calanoida (Copepoda). Deep-Sea Res II 2076-2088, 2010:57.
-
(2076)
Deep-Sea Res II
, vol.2010
, pp. 57
-
-
Cornils, A.1
Schulz, J.2
Schmitt, P.3
Lanuru, M.4
Richter, C.5
Schnack-Schiel, S.B.6
-
20
-
-
0034121456
-
Spatial distribution of copepods in the north of the Humboldt Current region off Chile during coastal upwelling
-
Escribano R, Hidalgo P. Spatial distribution of copepods in the north of the Humboldt Current region off Chile during coastal upwelling. J Mar Biol Ass UK 2000, 80:283-290.
-
(2000)
J Mar Biol Ass UK
, vol.80
, pp. 283-290
-
-
Escribano, R.1
Hidalgo, P.2
-
21
-
-
33749612584
-
A 5-year study of the influence of the northeast and southwest monsoons on copepod assemblages in the boundary coastal waters between the East China Sea and the Taiwan Strait
-
Hwang J-S, Souissi S, Tseng L-C, Seuront L, Schmitt FG, Fang L-S, Peng S-H, Cheng-Han WU, Hsiao S-H, Twan W-H. A 5-year study of the influence of the northeast and southwest monsoons on copepod assemblages in the boundary coastal waters between the East China Sea and the Taiwan Strait. J Plankton Res 2006, 28:943-958.
-
(2006)
J Plankton Res
, vol.28
, pp. 943-958
-
-
Hwang, J.-S.1
Souissi, S.2
Tseng, L.-C.3
Seuront, L.4
Schmitt, F.G.5
Fang, L.-S.6
Peng, S.-H.7
Cheng-Han, W.U.8
Hsiao, S.-H.9
Twan, W.-H.10
-
22
-
-
84861894432
-
Effects of suspended sediments on reproductive responses of Paracalanus sp. (Copepoda: Calanoida) in the laboratory
-
Kang HK. Effects of suspended sediments on reproductive responses of Paracalanus sp. (Copepoda: Calanoida) in the laboratory. J Plankton Res 2012, 34:626-635.
-
(2012)
J Plankton Res
, vol.34
, pp. 626-635
-
-
Kang, H.K.1
-
23
-
-
0021579150
-
Does Paracalanus feed with a leaky sieve?
-
Paffenhöfer G-A. Does Paracalanus feed with a leaky sieve?. Limnol Oceangr 1984, 29:155-160.
-
(1984)
Limnol Oceangr
, vol.29
, pp. 155-160
-
-
Paffenhöfer, G.-A.1
-
24
-
-
0033058035
-
Feeding by the small calanoid copepod Paracalanus sp. on heterotrophic dinoflagellates and ciliates
-
Suzuki K, Nakamura Y, Hiromi J. Feeding by the small calanoid copepod Paracalanus sp. on heterotrophic dinoflagellates and ciliates. Aquat Microb Ecol 1999, 17:99-103.
-
(1999)
Aquat Microb Ecol
, vol.17
, pp. 99-103
-
-
Suzuki, K.1
Nakamura, Y.2
Hiromi, J.3
-
25
-
-
0001538399
-
The estuarine Copepoda of Chiekong and Zaikong Rivers, Kwangtung Province, China
-
Shen CJ, Lee FS. The estuarine Copepoda of Chiekong and Zaikong Rivers, Kwangtung Province, China. Acta Zool Sin 1963, 15:571-596.
-
(1963)
Acta Zool Sin
, vol.15
, pp. 571-596
-
-
Shen, C.J.1
Lee, F.S.2
-
26
-
-
33748184433
-
Report on some Copepoda collected during the Melanesia Expedition of the Osaka Museum of Natural History
-
Vervoort W. Report on some Copepoda collected during the Melanesia Expedition of the Osaka Museum of Natural History. Publ Seto Mar Biol Lab 1962, 10:393-470.
-
(1962)
Publ Seto Mar Biol Lab
, vol.10
, pp. 393-470
-
-
Vervoort, W.1
-
27
-
-
0036010841
-
Molecular barcodes for soil nematode identification
-
10.1046/j.1365-294X.2002.01485.x, 11972769
-
Floyd R, Abebe E, Papert A, Blaxter ML. Molecular barcodes for soil nematode identification. Mol Ecol 2002, 11:839-850. 10.1046/j.1365-294X.2002.01485.x, 11972769.
-
(2002)
Mol Ecol
, vol.11
, pp. 839-850
-
-
Floyd, R.1
Abebe, E.2
Papert, A.3
Blaxter, M.L.4
-
28
-
-
77953617330
-
Paracalanus tropicus sp. n. (Copepoda, Paracalanidae) from South-East Atlantic
-
Andronov VN. Paracalanus tropicus sp. n. (Copepoda, Paracalanidae) from South-East Atlantic. Zool Zh 1977, 56:154-156.
-
(1977)
Zool Zh
, vol.56
, pp. 154-156
-
-
Andronov, V.N.1
-
29
-
-
0002021760
-
The distribution of calanoid copepods off the southeastern United States between Cape Hatteras and southern Florida
-
Bowman TE. The distribution of calanoid copepods off the southeastern United States between Cape Hatteras and southern Florida. Smithson Contrib Zool 1971, 96:1-58.
-
(1971)
Smithson Contrib Zool
, vol.96
, pp. 1-58
-
-
Bowman, T.E.1
-
30
-
-
0000108758
-
Copepoda
-
Leiden: Backhuys Publishers, Boltovskoy D
-
Bradford-Grieve JM, Markhaseva EL, Rocha C, Abiahy B. Copepoda. South Atlantic Zooplankton. Volume 2 1999, 869-1098. Leiden: Backhuys Publishers, Boltovskoy D.
-
(1999)
South Atlantic Zooplankton. Volume 2
, pp. 869-1098
-
-
Bradford-Grieve, J.M.1
Markhaseva, E.L.2
Rocha, C.3
Abiahy, B.4
-
31
-
-
79952735909
-
Molecular phylogeny of the Calanoida (Crustacea: Copepoda)
-
10.1016/j.ympev.2011.01.008, 21281724
-
Blanco-Bercial L, Bradford-Grieve JM, Bucklin A. Molecular phylogeny of the Calanoida (Crustacea: Copepoda). Mol Phylogenet Evol 2011, 59:103-113. 10.1016/j.ympev.2011.01.008, 21281724.
-
(2011)
Mol Phylogenet Evol
, vol.59
, pp. 103-113
-
-
Blanco-Bercial, L.1
Bradford-Grieve, J.M.2
Bucklin, A.3
-
32
-
-
84884586473
-
Phylogeny of the Paracalanidae Giesbrecht, 1888 (Crustacea: Copepoda: Calanoida)
-
10.1016/j.ympev.2013.06.018, 23831457
-
Cornils A, Blanco-Bercial L. Phylogeny of the Paracalanidae Giesbrecht, 1888 (Crustacea: Copepoda: Calanoida). Mol Phylogenet Evol 2013, 69:861-872. 10.1016/j.ympev.2013.06.018, 23831457.
-
(2013)
Mol Phylogenet Evol
, vol.69
, pp. 861-872
-
-
Cornils, A.1
Blanco-Bercial, L.2
-
33
-
-
84877288271
-
Copepod diversity in a subtropical bay based on a fragment of the mitochondrial COI gene
-
Jungbluth MJ, Lenz PH. Copepod diversity in a subtropical bay based on a fragment of the mitochondrial COI gene. J Plankton Res 2013, 35:630-643.
-
(2013)
J Plankton Res
, vol.35
, pp. 630-643
-
-
Jungbluth, M.J.1
Lenz, P.H.2
-
34
-
-
84948021194
-
Paracalanus indicus Wolfenden and Corycaeus aucklandicus Kraemer, two neritic pelagic copepods from New Zealand
-
Bradford JM. Paracalanus indicus Wolfenden and Corycaeus aucklandicus Kraemer, two neritic pelagic copepods from New Zealand. J R Soc NZ 1978, 8:133-141.
-
(1978)
J R Soc NZ
, vol.8
, pp. 133-141
-
-
Bradford, J.M.1
-
35
-
-
0032028998
-
Universal cytochrome b primers facilitate intraspecific studies in molluscan taxa
-
Merritt TJ, Shi L, Chase MC, Rex MA, Etter RJ, Quattro JM. Universal cytochrome b primers facilitate intraspecific studies in molluscan taxa. Mol Mar Biol Biotechnol 1998, 7:7-11.
-
(1998)
Mol Mar Biol Biotechnol
, vol.7
, pp. 7-11
-
-
Merritt, T.J.1
Shi, L.2
Chase, M.C.3
Rex, M.A.4
Etter, R.J.5
Quattro, J.M.6
-
36
-
-
0028528103
-
DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates
-
Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 1994, 3:294-299.
-
(1994)
Mol Mar Biol Biotechnol
, vol.3
, pp. 294-299
-
-
Folmer, O.1
Black, M.2
Hoeh, W.3
Lutz, R.4
Vrijenhoek, R.5
-
37
-
-
0028251187
-
Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers
-
Simon C, Frati F, Beckenbach A, Crespi B, Liu H, Flook P. Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am 1994, 87:651-701.
-
(1994)
Ann Entomol Soc Am
, vol.87
, pp. 651-701
-
-
Simon, C.1
Frati, F.2
Beckenbach, A.3
Crespi, B.4
Liu, H.5
Flook, P.6
-
38
-
-
3042649996
-
Mesquite: a modular system for evolutionary analysis. Version 2.75
-
Maddison W, Maddison D. Mesquite: a modular system for evolutionary analysis. Version 2.75. [http://mesquiteproject.org].
-
-
-
Maddison, W.1
Maddison, D.2
-
39
-
-
61449106586
-
" COI-like" sequences are becoming problematic in molecular systematic and DNA barcoding studies
-
Buhay JE. " COI-like" sequences are becoming problematic in molecular systematic and DNA barcoding studies. J Crustac Biol 2009, 29:96-110.
-
(2009)
J Crustac Biol
, vol.29
, pp. 96-110
-
-
Buhay, J.E.1
-
40
-
-
51649110939
-
Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
-
10.1073/pnas.0803076105, 2527351, 18757756
-
Song H, Buhay JE, Whiting MF, Crandall KA. Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified. Proc Natl Acad Sci U S A 2008, 105:13486-13491. 10.1073/pnas.0803076105, 2527351, 18757756.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 13486-13491
-
-
Song, H.1
Buhay, J.E.2
Whiting, M.F.3
Crandall, K.A.4
-
41
-
-
79251597552
-
Preventing the pollution of mitochondrial datasets with nuclear mitochondrial paralogs (numts)
-
10.1016/j.mito.2010.10.004, 21047564
-
Calvignac S, Konecny L, Malard F, Douady CJ. Preventing the pollution of mitochondrial datasets with nuclear mitochondrial paralogs (numts). Mitochondrion 2011, 11:246-254. 10.1016/j.mito.2010.10.004, 21047564.
-
(2011)
Mitochondrion
, vol.11
, pp. 246-254
-
-
Calvignac, S.1
Konecny, L.2
Malard, F.3
Douady, C.J.4
-
42
-
-
79957613599
-
MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
10.1093/molbev/msr121, 3203626, 21546353
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011, 28:2731-2739. 10.1093/molbev/msr121, 3203626, 21546353.
-
(2011)
Mol Biol Evol
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
43
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
10.1093/bioinformatics/btl446, 16928733
-
Stamatakis A. RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 2006, 22:2688-2690. 10.1093/bioinformatics/btl446, 16928733.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
44
-
-
84860109324
-
MrBayes 3.2: Efficient bayesian phylogenetic inference and model choice across a large model space
-
10.1093/sysbio/sys029, 3329765, 22357727
-
Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Hohna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. MrBayes 3.2: Efficient bayesian phylogenetic inference and model choice across a large model space. Syst Biol 2012, 61:539-542. 10.1093/sysbio/sys029, 3329765, 22357727.
-
(2012)
Syst Biol
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
Ayres, D.L.4
Darling, A.5
Hohna, S.6
Larget, B.7
Liu, L.8
Suchard, M.A.9
Huelsenbeck, J.P.10
-
45
-
-
77950820827
-
How many bootstrap replicates are necessary?
-
Pattengale ND, Alipour M, Bininda-Emonds OR, Moret BM, Stamatakis A. How many bootstrap replicates are necessary?. J Comput Biol 2009, 17:337-354.
-
(2009)
J Comput Biol
, vol.17
, pp. 337-354
-
-
Pattengale, N.D.1
Alipour, M.2
Bininda-Emonds, O.R.3
Moret, B.M.4
Stamatakis, A.5
-
46
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
10.1080/10635150390235520, 14530136
-
Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003, 52:696-704. 10.1080/10635150390235520, 14530136.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
47
-
-
45849154165
-
JModelTest: Phylogenetic model averaging
-
10.1093/molbev/msn083, 18397919
-
Posada D. jModelTest: Phylogenetic model averaging. Mol Biol Evol 2008, 25:1253-1256. 10.1093/molbev/msn083, 18397919.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 1253-1256
-
-
Posada, D.1
-
48
-
-
0033771358
-
TCS: A computer program to estimate gene genealogies
-
10.1046/j.1365-294x.2000.01020.x, 11050560
-
Clement MJ, Posada D, Crandall KA. TCS: A computer program to estimate gene genealogies. Mol Ecol 2000, 9:1657-1659. 10.1046/j.1365-294x.2000.01020.x, 11050560.
-
(2000)
Mol Ecol
, vol.9
, pp. 1657-1659
-
-
Clement, M.J.1
Posada, D.2
Crandall, K.A.3
-
49
-
-
78751655395
-
SPLITS: SPecies' LImits by Threshold Statistics. R package version 1.0-18/r45
-
Edzard T, Fujisawa T, Barraclough TG. SPLITS: SPecies' LImits by Threshold Statistics. R package version 1.0-18/r45. [http://r-forge.r-project.org/projects/splits/].
-
-
-
Edzard, T.1
Fujisawa, T.2
Barraclough, T.G.3
-
50
-
-
84882749675
-
Delimiting species using single-locus data and the generalized mixed yule coalescent approach: a revised method and evaluation on simulated data sets
-
10.1093/sysbio/syt033, 3739884, 23681854
-
Fujisawa T, Barraclough TG. Delimiting species using single-locus data and the generalized mixed yule coalescent approach: a revised method and evaluation on simulated data sets. Syst Biol 2013, 62:707-724. 10.1093/sysbio/syt033, 3739884, 23681854.
-
(2013)
Syst Biol
, vol.62
, pp. 707-724
-
-
Fujisawa, T.1
Barraclough, T.G.2
-
51
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
10.1186/1471-2148-7-214, 2247476, 17996036
-
Drummond AJ, Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 2007, 7:214. 10.1186/1471-2148-7-214, 2247476, 17996036.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
52
-
-
0042531561
-
Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species
-
10.1098/rsbl.2003.0025, 1698023, 12952648
-
Hebert PDN, Ratnasingham S, de Waard JR. Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc R Soc B 2003, 270:S96-S99. 10.1098/rsbl.2003.0025, 1698023, 12952648.
-
(2003)
Proc R Soc B
, vol.270
-
-
Hebert, P.D.N.1
Ratnasingham, S.2
de Waard, J.R.3
-
54
-
-
84859563653
-
Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding
-
10.1111/j.1755-0998.2011.03108.x, 22243808
-
Brown SDJ, Collins RA, Boyer S, Lefort M-C, Malumbres-Olarte J, Vink CJ, Cruickshank RH. Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding. Mol Ecol Resour 2012, 12:562-565. 10.1111/j.1755-0998.2011.03108.x, 22243808.
-
(2012)
Mol Ecol Resour
, vol.12
, pp. 562-565
-
-
Brown, S.D.J.1
Collins, R.A.2
Boyer, S.3
Lefort, M.-C.4
Malumbres-Olarte, J.5
Vink, C.J.6
Cruickshank, R.H.7
-
55
-
-
84881617524
-
Comparison of molecular species identification for North Sea calanoid copepods (Crustacea) using proteome fingerprints and DNA sequences
-
10.1111/1755-0998.12139, 23848968
-
Laakmann S, Gerdts G, Erler R, Knebelsberger T, Martínez Arbizu P, Raupach MJ. Comparison of molecular species identification for North Sea calanoid copepods (Crustacea) using proteome fingerprints and DNA sequences. Mol Ecol Resour 2013, 13:862-876. 10.1111/1755-0998.12139, 23848968.
-
(2013)
Mol Ecol Resour
, vol.13
, pp. 862-876
-
-
Laakmann, S.1
Gerdts, G.2
Erler, R.3
Knebelsberger, T.4
Martínez Arbizu, P.5
Raupach, M.J.6
-
56
-
-
0033133559
-
Taxonomic and systematic assessment of planktonic copepods using mitochondrial COI sequence variation and competitive, species-specific PCR
-
Bucklin A, Guarneri M, Hill RS, Bentley A, Kaartvedt S. Taxonomic and systematic assessment of planktonic copepods using mitochondrial COI sequence variation and competitive, species-specific PCR. Hydrobiologia 1999, 401:239-254.
-
(1999)
Hydrobiologia
, vol.401
, pp. 239-254
-
-
Bucklin, A.1
Guarneri, M.2
Hill, R.S.3
Bentley, A.4
Kaartvedt, S.5
-
57
-
-
0034824223
-
Multiplexed species-specific PCR protocol to discriminate four N. Atlantic Calanus species, with an mtCOI gene tree for ten Calanus species
-
Hill R, Allen LD, Bucklin A. Multiplexed species-specific PCR protocol to discriminate four N. Atlantic Calanus species, with an mtCOI gene tree for ten Calanus species. Mar Biol 2001, 139:279-287.
-
(2001)
Mar Biol
, vol.139
, pp. 279-287
-
-
Hill, R.1
Allen, L.D.2
Bucklin, A.3
-
58
-
-
61449122026
-
Morphological and molecular phylogenetic analysis of evolutionary lineages within Clausocalanus (Copepoda: Calanoida)
-
Bucklin A, Frost BW. Morphological and molecular phylogenetic analysis of evolutionary lineages within Clausocalanus (Copepoda: Calanoida). J Crustac Biol 2009, 29:111-120.
-
(2009)
J Crustac Biol
, vol.29
, pp. 111-120
-
-
Bucklin, A.1
Frost, B.W.2
-
59
-
-
36249004900
-
Species concepts and species delimitation
-
10.1080/10635150701701083, 18027281
-
De Queiroz K. Species concepts and species delimitation. Syst Biol 2007, 56:879-886. 10.1080/10635150701701083, 18027281.
-
(2007)
Syst Biol
, vol.56
, pp. 879-886
-
-
De Queiroz, K.1
-
60
-
-
0035576285
-
Prospects for nuclear gene phylogeography
-
Hare MP. Prospects for nuclear gene phylogeography. Trends Ecol Evol 2001, 16:700-706.
-
(2001)
Trends Ecol Evol
, vol.16
, pp. 700-706
-
-
Hare, M.P.1
-
61
-
-
67649400420
-
Gene flow and species delimitation
-
10.1016/j.tree.2009.02.011, 19409650
-
Petit RJ, Excoffier L. Gene flow and species delimitation. Trends Ecol Evol 2009, 24:386-393. 10.1016/j.tree.2009.02.011, 19409650.
-
(2009)
Trends Ecol Evol
, vol.24
, pp. 386-393
-
-
Petit, R.J.1
Excoffier, L.2
-
62
-
-
84983847379
-
Failure of interbreeding between Atlantic and Pacific populations of the marine calanoid copepod Acartia clausi Giesbrecht
-
Carrillo B-G, Miller CB, Wiebe PH. Failure of interbreeding between Atlantic and Pacific populations of the marine calanoid copepod Acartia clausi Giesbrecht. Limnol Oceangr 1974, 19:452-458.
-
(1974)
Limnol Oceangr
, vol.19
, pp. 452-458
-
-
Carrillo, B.-G.1
Miller, C.B.2
Wiebe, P.H.3
-
63
-
-
0034496789
-
Global phylogeography of a cryptic copepod species complex and reproductive isolation between genetically proximate " populations"
-
Lee CE. Global phylogeography of a cryptic copepod species complex and reproductive isolation between genetically proximate " populations" Evolution 2014-2027, 2000:54.
-
(2014)
Evolution
, vol.2000
, pp. 54
-
-
Lee, C.E.1
-
64
-
-
79953233997
-
Comparison of morphological and molecular traits for species identification and taxonomic grouping of oncaeid copepods
-
Böttger-Schnack R, Machida RJ. Comparison of morphological and molecular traits for species identification and taxonomic grouping of oncaeid copepods. Hydrobiologia 2010, 666:111-125.
-
(2010)
Hydrobiologia
, vol.666
, pp. 111-125
-
-
Böttger-Schnack, R.1
Machida, R.J.2
-
65
-
-
84870246177
-
Overlooked cryptic endemism in copepods: Systematics and natural history of the calanoid subgenus Occidodiaptomus Borutzky 1991 (Copepoda, Calanoida, Diaptomidae)
-
10.1016/j.ympev.2012.09.016, 23026809
-
Marrone F, Brutto Lo S, Hundsdoerfer AK, Arculeo M. Overlooked cryptic endemism in copepods: Systematics and natural history of the calanoid subgenus Occidodiaptomus Borutzky 1991 (Copepoda, Calanoida, Diaptomidae). Mol Phylogenet Evol 2013, 66:190-202. 10.1016/j.ympev.2012.09.016, 23026809.
-
(2013)
Mol Phylogenet Evol
, vol.66
, pp. 190-202
-
-
Marrone, F.1
Brutto Lo, S.2
Hundsdoerfer, A.K.3
Arculeo, M.4
-
66
-
-
79956339914
-
Cryptic diversity and comparative phylogeography of the estuarine copepod Acartia tonsa on the US Atlantic coast
-
10.1111/j.1365-294X.2011.05079.x, 21521392
-
Chen G, Hare MP. Cryptic diversity and comparative phylogeography of the estuarine copepod Acartia tonsa on the US Atlantic coast. Mol Ecol 2011, 20:2425-2441. 10.1111/j.1365-294X.2011.05079.x, 21521392.
-
(2011)
Mol Ecol
, vol.20
, pp. 2425-2441
-
-
Chen, G.1
Hare, M.P.2
-
67
-
-
58149099234
-
Deep genetic divergences among morphologically similar and parapatric Skistodiaptomus (Copepoda: Calanoida: Diaptomidae) challenge the hypothesis of Pleistocene speciation
-
Thum RA, Harrison RG. Deep genetic divergences among morphologically similar and parapatric Skistodiaptomus (Copepoda: Calanoida: Diaptomidae) challenge the hypothesis of Pleistocene speciation. Biol J Linnean Soc 2009, 96:150-165.
-
(2009)
Biol J Linnean Soc
, vol.96
, pp. 150-165
-
-
Thum, R.A.1
Harrison, R.G.2
-
68
-
-
1542351527
-
Molecular phylogeography and evolutionary history of the estuarine copepod, Acartia tonsa, on the Northwest Atlantic Coast
-
Caudill CC, Bucklin A. Molecular phylogeography and evolutionary history of the estuarine copepod, Acartia tonsa, on the Northwest Atlantic Coast. Hydrobiologia 2004, 511:91-102.
-
(2004)
Hydrobiologia
, vol.511
, pp. 91-102
-
-
Caudill, C.C.1
Bucklin, A.2
-
69
-
-
40449097878
-
Cryptic ecological diversification of a planktonic estuarine copepod, Acartia tonsa
-
10.1111/j.1365-294X.2007.03657.x, 18248575
-
Chen G, Hare MP. Cryptic ecological diversification of a planktonic estuarine copepod, Acartia tonsa. Mol Ecol 2008, 17:1451-1468. 10.1111/j.1365-294X.2007.03657.x, 18248575.
-
(2008)
Mol Ecol
, vol.17
, pp. 1451-1468
-
-
Chen, G.1
Hare, M.P.2
-
70
-
-
0037101753
-
Morphological stasis in the Eurytemora affinis species complex (Copepoda: Temoridae)
-
Lee CE, Frost BW. Morphological stasis in the Eurytemora affinis species complex (Copepoda: Temoridae). Hydrobiologia 2002, 480:111-128.
-
(2002)
Hydrobiologia
, vol.480
, pp. 111-128
-
-
Lee, C.E.1
Frost, B.W.2
-
72
-
-
47249091041
-
Diversity and Geographic Distribution of Marine Planktonic Copepods
-
Razouls C, de Bovée F, Kouwenberg J, Desreumaux N. Diversity and Geographic Distribution of Marine Planktonic Copepods. [http://copepodes.obs-banyuls.fr/en/].
-
-
-
Razouls, C.1
de Bovée, F.2
Kouwenberg, J.3
Desreumaux, N.4
-
74
-
-
78650176416
-
Patterns of copepod diversity in the Chilean coastal upwelling system
-
Hidalgo P, Escribano R, Vergara O, Jorquera E, Donoso K, Mendoza P. Patterns of copepod diversity in the Chilean coastal upwelling system. Deep-Sea Res II 2089-2097, 2010:57.
-
(2089)
Deep-Sea Res II
, vol.2010
, pp. 57
-
-
Hidalgo, P.1
Escribano, R.2
Vergara, O.3
Jorquera, E.4
Donoso, K.5
Mendoza, P.6
-
75
-
-
19544366087
-
Mesozooplankton dynamics in nearshore waters of the Great Barrier Reef
-
McKinnon AD, Duggan S, De'ath G. Mesozooplankton dynamics in nearshore waters of the Great Barrier Reef. Est Coast Shelf Sci 2005, 63:497-511.
-
(2005)
Est Coast Shelf Sci
, vol.63
, pp. 497-511
-
-
McKinnon, A.D.1
Duggan, S.2
De'ath, G.3
-
76
-
-
0027877060
-
Distribution patterns of zooplankton in Tomales Bay, California
-
Kimmerer WJ. Distribution patterns of zooplankton in Tomales Bay, California. Estuaries 1993, 16:264-272.
-
(1993)
Estuaries
, vol.16
, pp. 264-272
-
-
Kimmerer, W.J.1
-
77
-
-
79957881197
-
Comparative phylogeography and connectivity of sibling species of the marine copepod Clausocalanus (Calanoida)
-
Blanco-Bercial L, Álvarez-Marqués F, Bucklin A. Comparative phylogeography and connectivity of sibling species of the marine copepod Clausocalanus (Calanoida). J Exp Mar Biol Ecol 2011, 404:108-115.
-
(2011)
J Exp Mar Biol Ecol
, vol.404
, pp. 108-115
-
-
Blanco-Bercial, L.1
Álvarez-Marqués, F.2
Bucklin, A.3
-
78
-
-
18044362754
-
Genetic and morphological description of Eucalanus spinifer T. Scott, 1894 (Calanoida: Eucalanidae), a circumglobal sister species of the copepod E. hyalinus s.s. (Claus, 1866)
-
Goetze E, Bradford-Grieve J. Genetic and morphological description of Eucalanus spinifer T. Scott, 1894 (Calanoida: Eucalanidae), a circumglobal sister species of the copepod E. hyalinus s.s. (Claus, 1866). Prog Oceanogr 2005, 65:55-87.
-
(2005)
Prog Oceanogr
, vol.65
, pp. 55-87
-
-
Goetze, E.1
Bradford-Grieve, J.2
-
79
-
-
34547133461
-
Marine ecoregions of the world: a bioregionalization of coastal and shelf areas
-
Spalding MD, Fox HE, Allen GR, Davidson N. Marine ecoregions of the world: a bioregionalization of coastal and shelf areas. Bioscience 2007, 57:573-583.
-
(2007)
Bioscience
, vol.57
, pp. 573-583
-
-
Spalding, M.D.1
Fox, H.E.2
Allen, G.R.3
Davidson, N.4
-
80
-
-
0032495069
-
New dates and new rates for divergence across the Isthmus of Panama
-
Knowlton N, Weigt LA. New dates and new rates for divergence across the Isthmus of Panama. Proc R Soc Lond B 1998, 265:2257-2263.
-
(1998)
Proc R Soc Lond B
, vol.265
, pp. 2257-2263
-
-
Knowlton, N.1
Weigt, L.A.2
-
81
-
-
0028162394
-
Vicariance biogeography of the open-ocean Pacific
-
White BN. Vicariance biogeography of the open-ocean Pacific. Prog Oceanogr 1994, 34:257-284.
-
(1994)
Prog Oceanogr
, vol.34
, pp. 257-284
-
-
White, B.N.1
-
82
-
-
0032543568
-
Effect of the formation of the Isthmus of Panama on Atlantic Ocean thermohaline circulation
-
Haug GH, Tiedemann R. Effect of the formation of the Isthmus of Panama on Atlantic Ocean thermohaline circulation. Nature 1998, 393:673-676.
-
(1998)
Nature
, vol.393
, pp. 673-676
-
-
Haug, G.H.1
Tiedemann, R.2
-
83
-
-
84885037176
-
High evolutionary potential of marine zooplankton
-
10.1002/ece3.644, 3930040, 24567838
-
Peijnenburg KTCA, Goetze E. High evolutionary potential of marine zooplankton. Ecol Evol 2013, 3:2765-2781. 10.1002/ece3.644, 3930040, 24567838.
-
(2013)
Ecol Evol
, vol.3
, pp. 2765-2781
-
-
Peijnenburg, K.T.C.A.1
Goetze, E.2
-
84
-
-
0141566409
-
Interannual variability in copepod community composition at a coastal station in the northern California Current: a multivariate approach
-
Peterson WT, Keister JE. Interannual variability in copepod community composition at a coastal station in the northern California Current: a multivariate approach. Deep-Sea Res II 2003, 50:2499-2517.
-
(2003)
Deep-Sea Res II
, vol.50
, pp. 2499-2517
-
-
Peterson, W.T.1
Keister, J.E.2
-
85
-
-
84889080685
-
Genetic variability of the Metridia lucens complex (Copepoda) in the Southern Ocean
-
Stupnikova AN, Molodtsova TN, Mugue NS, Neretina TV. Genetic variability of the Metridia lucens complex (Copepoda) in the Southern Ocean. J Mar Syst 2013, 128:175-184.
-
(2013)
J Mar Syst
, vol.128
, pp. 175-184
-
-
Stupnikova, A.N.1
Molodtsova, T.N.2
Mugue, N.S.3
Neretina, T.V.4
-
86
-
-
84856277999
-
Ballast water transport of non-indigenous zooplankton to Canadian ports
-
DiBacco C, Humphrey DB, Nasmith LE, Levings CD. Ballast water transport of non-indigenous zooplankton to Canadian ports. ICES J Mar Sci 2012, 69:483-491.
-
(2012)
ICES J Mar Sci
, vol.69
, pp. 483-491
-
-
DiBacco, C.1
Humphrey, D.B.2
Nasmith, L.E.3
Levings, C.D.4
-
87
-
-
2342418566
-
The origin and identity of invertebrate organisms being transported to Canada's Pacific coast by ballast water
-
Levings CD, Cordell JR, Ong S, Piercey GE. The origin and identity of invertebrate organisms being transported to Canada's Pacific coast by ballast water. Can J Fish Aquat Sci 2004, 61:1-11.
-
(2004)
Can J Fish Aquat Sci
, vol.61
, pp. 1-11
-
-
Levings, C.D.1
Cordell, J.R.2
Ong, S.3
Piercey, G.E.4
-
88
-
-
0027059406
-
Transport of diatom and dinoflagellate resting spores in ships' ballast water: implications for plankton biogeography and aquaculture
-
Hallegraeff GM, Bolch CJ. Transport of diatom and dinoflagellate resting spores in ships' ballast water: implications for plankton biogeography and aquaculture. J Plankton Res 1992, 14:1067-1084.
-
(1992)
J Plankton Res
, vol.14
, pp. 1067-1084
-
-
Hallegraeff, G.M.1
Bolch, C.J.2
-
89
-
-
84860537939
-
Comprehensive sampling reveals circumpolarity and sympatry in seven mitochondrial lineages of the Southern Ocean crinoid species Promachocrinus kerguelensis (Echinodermata)
-
10.1111/j.1365-294X.2012.05512.x, 22469156
-
Hemery LG, Eléaume M, Roussel V, Améziane N, Gallut C, Steinke D, Cruaud C, Couloux A, Wilson NG. Comprehensive sampling reveals circumpolarity and sympatry in seven mitochondrial lineages of the Southern Ocean crinoid species Promachocrinus kerguelensis (Echinodermata). Mol Ecol 2012, 21:2502-2518. 10.1111/j.1365-294X.2012.05512.x, 22469156.
-
(2012)
Mol Ecol
, vol.21
, pp. 2502-2518
-
-
Hemery, L.G.1
Eléaume, M.2
Roussel, V.3
Améziane, N.4
Gallut, C.5
Steinke, D.6
Cruaud, C.7
Couloux, A.8
Wilson, N.G.9
|