A novel predictive equation for potential diagnosis of cholangiocarcinoma

PLoS ONE

Volumn 9, Issue 2, 2014, Pages

  Kraiklang, Ratthaphol ^a   Pairojkul, Chawalit ^a   Khuntikeo, Narong ^a   Imtawil, Kanokwan ^a   Wongkham, Sopit ^a   Wongkham, Chaisiri ^a  

^a KHON KAEN UNIVERSITY   (Thailand)

Author keywords

[No Author keywords available]

Indexed keywords

CA 19-9 ANTIGEN; CARCINOEMBRYONIC ANTIGEN;

ARTICLE; BILE DUCT CARCINOMA; CANCER DIAGNOSIS; CANCER INCIDENCE; CELL ADHESION; CELL DIFFERENTIATION; CELL METABOLISM; CELL MOTION; CELL PROLIFERATION; CLDN4 GENE; GENE; GENE EXPRESSION; HISTOPATHOLOGY; HOXB7 GENE; HUMAN; HUMAN TISSUE; LIVER; LIVER CANCER; LIVER CELL CARCINOMA; MARKER GENE; NUCLEOTIDE SEQUENCE; PHENOTYPE; POLYMERASE CHAIN REACTION; PREDICTION; REAL TIME POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; TMSB4 GENE; TREATMENT OUTCOME; TTR GENE;

CELL DIFFERENTIATION; CELL PROLIFERATION; CHOLANGIOCARCINOMA; CLAUDIN-4; HOMEODOMAIN PROTEINS; HUMANS; REAL-TIME POLYMERASE CHAIN REACTION; RECEPTORS, ALBUMIN;

EID: 84896521786     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0089337     Document Type: Article

References (28)

1. Patel T (2001) Increasing incidence and mortality of primary intrahepatic cholangiocarcinoma in the United States. Hepatology 33: 1353-1357. (Pubitemid 32496970)
2. Shaib Y, El-Serag HB (2004) The epidemiology of cholangiocarcinoma. Semin Liver Dis 24: 115-125. (Pubitemid 38738341)
3. Thamavit W, Bhamarapravati N, Sahaphong S, Vajrasthira S, Angsubhakorn S (1978) Effects of dimethylnitrosamine on induction of cholangiocarcinoma in Opisthorchis viverrini-infected Syrian golden hamsters. Cancer Res 38: 4634-4639. (Pubitemid 9065143)
4. Vatanasapt V, Sripa B, Sithithaworn P, Mairiang P (1999) Liver flukes and liver cancer. New York: Cold Spring Harbor Labolatory Press. 313-343 p.
5. Tyson GL, El-Serag HB (2011) Risk factors for cholangiocarcinoma. Hepatology 54: 173-184.
6. Konstantinopoulos PA, Fountzilas E, Goldsmith JD, Bhasin M, Pillay K, et al. (2010) Analysis of multiple sarcoma expression datasets: implications for classification, oncogenic pathway activation and chemotherapy resistance. PLoS One 5: e9747.
7. Konstantinopoulos PA, Cannistra SA, Fountzilas H, Culhane A, Pillay K, et al. (2010) Integrated analysis of multiple microarray datasets identifies a reproducible survival predictor in ovarian cancer. PLoS One 6: e18202.
8. Xu ZY, Chen JS, Shu YQ (2010) Gene expression profile towards the prediction of patient survival of gastric cancer. Biomed Pharmacother 64: 133-139.
9. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
10. Andersen CL, Jensen JL, Orntoft TF (2004) Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 64: 5245-5250. (Pubitemid 39006544)
11. Schadt EE, Li C, Ellis B, Wong WH (2001) Feature extraction and normalization algorithms for high-density oligonucleotide gene expression array data. J Cell Biochem Suppl; Suppl 37: 120-125.
12. Obama K, Ura K, Li M, Katagiri T, Tsunoda T, et al. (2005) Genome-wide analysis of gene expression in human intrahepatic cholangiocarcinoma. Hepatology 41: 1339-1348. (Pubitemid 40770287)
13. Jinawath N, Chamgramol Y, Furukawa Y, Obama K, Tsunoda T, et al. (2006) Comparison of gene expression profiles between Opisthorchis viverrini and non- Opisthorchis viverrini associated human intrahepatic cholangiocarcinoma. Hepatology 44: 1025-1038. (Pubitemid 46489566)
14. Hass HG, Nehls O, Jobst J, Frilling A, Vogel U, et al. (2008) Identification of osteopontin as the most consistently over-expressed gene in intrahepatic cholangiocarcinoma: detection by oligonucleotide microarray and real-time PCR analysis. World J Gastroenterol 14: 2501-2510. (Pubitemid 352037737)
15. Nishino R, Honda M, Yamashita T, Takatori H, Minato H, et al. (2008) Identification of novel candidate tumour marker genes for intrahepatic cholangiocarcinoma. J Hepatol 49: 207-216.
16. Wang AG, Yoon SY, Oh JH, Jeon YJ, Kim M, et al. (2006) Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. Biochem Biophys Res Commun 345: 1022-1032. (Pubitemid 43776521)
17. Katahira J, Inoue N, Horiguchi Y, Matsuda M, Sugimoto N (1997) Molecular cloning and functional characterization of the receptor for Clostridium perfringens enterotoxin. J Cell Biol 136: 1239-1247. (Pubitemid 27421912)
18. Robertson SL, McClane BA (2011) Interactions between Clostridium perfringens enterotoxin and claudins. Methods Mol Biol 762: 63-75.
19. Care A, Valtieri M, Mattia G, Meccia E, Masella B, et al. (1999) Enforced expression of HOXB7 promotes hematopoietic stem cell proliferation and myeloid-restricted progenitor differentiation. Oncogene 18: 1993-2001. (Pubitemid 29150086)
20. Feldmann G, Nattermann J, Nischalke HD, Gorschluter M, Kuntzen T, et al. (2006) Detection of human aspartyl (asparaginyl) beta-hydroxylase and homeobox B7 mRNA in brush cytology specimens from patients with bile duct cancer. Endoscopy 38: 604-609. (Pubitemid 43978529)
21. Kobayashi T, Okada F, Fujii N, Tomita N, Ito S, et al. (2002) Thymosin-beta4 regulates motility and metastasis of malignant mouse fibrosarcoma cells. Am J Pathol 160: 869-882. (Pubitemid 34224577)
22. Grant DS, Rose W, Yaen C, Goldstein A, Martinez J, et al. (1999) Thymosin beta4 enhances endothelial cell differentiation and angiogenesis. Angiogenesis 3: 125-135. (Pubitemid 129644639)
23. Jo JO, Kang YJ, Ock MS, Kleinman HK, Chang HK, et al. (2011) Thymosin beta4 expression in human tissues and in tumors using tissue microarrays. Appl Immunohistochem Mol Morphol 19: 160-167.
24. Wang WS, Chen PM, Hsiao HL, Wang HS, Liang WY, et al. (2004) Overexpression of the thymosin beta-4 gene is associated with increased invasion of SW480 colon carcinoma cells and the distant metastasis of human colorectal carcinoma. Oncogene 23: 6666-6671.
25. Power DM, Elias NP, Richardson SJ, Mendes J, Soares CM, et al. (2000) Evolution of the thyroid hormone-binding protein, transthyretin. Gen Comp Endocrinol 119: 241-255.
26. Ritchie RF, Palomaki GE, Neveux LM, Navolotskaia O, Ledue TB, et al. (1999) Reference distributions for the negative acute-phase serum proteins, albumin, transferrin and transthyretin: a practical, simple and clinically relevant approach in a large cohort. J Clin Lab Anal 13: 273-279.
27. Liu L, Wang J, Liu B, Dai S, Wang X, et al. (2008) Serum levels of variants of transthyretin down-regulation in cholangiocarcinoma. J Cell Biochem 104: 745- 755. (Pubitemid 351830826)
28. Kozak KR, Su F, Whitelegge JP, Faull K, Reddy S, et al. (2005) Characterization of serum biomarkers for detection of early stage ovarian cancer. Proteomics 5: 4589-4596. (Pubitemid 41739936)