Full-genome analysis of a canine pneumovirus causing acute respiratory disease in dogs, Italy

PLoS ONE

Volumn 9, Issue 1, 2014, Pages

  Decaro, Nicola ^a   Pinto, Pierfrancesco ^a   Mari, Viviana ^a   Elia, Gabriella ^a   Larocca, Vittorio ^a   Camero, Michele ^a   Terio, Valentina ^a   Losurdo, Michele ^a   Martella, Vito ^a   Buonavoglia, Canio ^a  

^a UNIVERSITY OF BARI   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CANINE INFECTIOUS RESPIRATORY DISEASE; COUGHING; DOG DISEASE; EPIDEMIC; FEMALE; FEVER; GENOME ANALYSIS; ITALY; MALE; MOLECULAR BIOLOGY; NONHUMAN; NOSE DISEASE; NUCLEOTIDE SEQUENCE; PARAMYXOVIRUS INFECTION; PNEUMOVIRINAE; STRAIN DIFFERENCE; UNITED STATES; VIRAL RESPIRATORY TRACT INFECTION; VIRUS CHARACTERIZATION; VIRUS DETECTION; VIRUS GENOME; VIRUS ISOLATION; VIRUS STRAIN;

ANIMALS; BASE SEQUENCE; DISEASE OUTBREAKS; DOG DISEASES; DOGS; FEMALE; GENE ORDER; GENOME, VIRAL; ITALY; MALE; MOLECULAR SEQUENCE DATA; PHYLOGENY; PNEUMOVIRUS; PNEUMOVIRUS INFECTIONS; SEQUENCE ALIGNMENT;

EID: 84896450185     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0085220     Document Type: Article

References (39)

1. Buonavoglia C, Martella V (2007) Canine respiratory viruses. Vet Res 38: 355-373. (Pubitemid 46562411)
2. Decaro N, Martella V, Buonavoglia C (2008) Canine adenoviruses and herpesvirus. Vet Clin North Am Small Anim Pract 38: 799-814. (Pubitemid 351696468)
3. Martella V, Elia G, Buonavoglia C (2008) Canine distemper virus. Vet Clin North Am Small Anim Pract 38: 787-797. (Pubitemid 351696469)
4. Ellis JA, Krakowka GS (2012) A review of canine parainfluenza virus infection in dogs. J Am Vet Med Assoc 240: 273-284.
5. Dubovi EJ (2010) Canine influenza. Vet Clin North Am Small Anim Pract 40: 1063-1071.
6. Erles K, Toomey C, Brooks HW, Brownlie J (2003) Detection of a group 2 coronavirus in dogs with canine infectious respiratory disease. Virology 310: 216-223. (Pubitemid 37487623)
7. Decaro N, Buonavoglia C (2008) An update on canine coronaviruses: Viral evolution and pathobiology. Vet Microbiol 132: 221-234.
8. Decaro N, Buonavoglia C (2011) Canine coronavirus: not only an enteric pathogen. Vet Clin North Am Small Anim Pract 38: 799-814.
9. Kapoor A, Mehta N, Dubovi EJ, Simmonds P, Govindasamy L, et al (2012) Characterization of novel canine bocaviruses and their association with respiratory disease. J Gen Virol 93: 341-346.
10. Kapoor A, Simmonds P, Gerold G, Qaisar N, Jain K, et al (2011) Characterization of a canine homolog of hepatitis C virus. Proc Natl Acad Sci USA 108: 11608-11613.
11. Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (2005) Virus Taxonomy. Eighth Report of the International Committee on Taxonomy of Viruses. London: Elsevier/Academic Press.
12. Zenner L, Regnault JP (2000) Ten-year long monitoring of laboratory mouse and rat colonies in French facilities: a retrospective study. Lab Anim 34: 76-83. (Pubitemid 30060264)
13. Renshaw RW, Zylich NC, Laverack MA, Glaser AL, Dubovi EJ (2010) Pneumovirus in dogs with acute respiratory disease. Emerg Infect Dis 16: 993-995.
14. Renshaw R, Laverack M, Zylich N, Glaser A, Dubovi E (2011) Genomic analysis of a pneumovirus isolated from dogs with acute respiratory disease. Vet Microbiol 150: 88-95.
15. Percopo CM, Dubovi EJ, Renshaw RW, Dyer KD, Domachowske JB, et al (2011) Canine pneumovirus replicates in mouse lung tissue and elicits inflammatory pathology. Virology 416: 26-31.
16. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41: 95-98.
17. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599. (Pubitemid 47236692)
18. Erles K, Dubovi EJ, Brooks HW, Brownlie J (2004) Longitudinal study of viruses associated with canine infectious respiratory disease. J Clin Microbiol 42: 4524-4529. (Pubitemid 39362366)
19. Leary TP, Erker JC, Chalmers ML, Cruz AT, Wetzel JD, et al (2002) Detection of mammalian reovirus RNA by using reverse transcription-PCR: sequence diversity within the l3-encoding L1 gene. J Clin Microbiol 40: 1368-1375. (Pubitemid 34279902)
20. Hu RL, Huang G, Qiu W, Zhong ZH, Xia XZ, et al (2001) Detection and differentiation of CAV-1 and CAV-2 by polymerase chain reaction. Vet Res Commun 25: 77-84.
21. Elia G, Decaro N, Martella V, Cirone F, Lucente MS, et al (2006) Detection of canine distemper virus in dogs by real-time RT-PCR. J Virol Methods 136: 171-176. (Pubitemid 44051589)
22. Decaro N, Elia G, Campolo M, Desario C, Mari V, et al (2008) Detection of bovine coronavirus using a TaqMan-based real-time RT-PCR assay. J Virol Methods. 151: 167-171.
23. Decaro N, Pratelli A, Campolo M, Elia G, Martella V, et al (2004) Quantitation of canine coronavirus RNA in the faeces of dogs by TaqMan RT-PCR. J Virol Methods. 119: 145-150. (Pubitemid 38670406)
24. Decaro N, Martella V, Ricci D, Elia G, Desario C, et al (2005) Genotypespecific fluorogenic RT-PCR assays for the detection and quantitation of canine coronavirus type I and type II RNA in faecal samples of dogs. J Virol Methods 130: 72-78. (Pubitemid 41599753)
25. Decaro N, Altamura M, Pratelli A, Pepe M, Tinelli A, et al (2002) Evaluation of the innate immune response in pups during canine parvovirus type 1 infection. New Microbiol 25: 291-298. (Pubitemid 135747292)
26. Decaro N, Amorisco F, Desario C, Lorusso E, Camero M, et al (2010) Development and validation of a real-time PCR assay for specific and sensitive detection of canid herpesvirus 1. J Virol Methods 169: 176-180.
27. Di Trani L, Bedini B, Donatelli I, Campitelli L, Chiappini B, et al (2006) A sensitive one-step real-time PCR for detection of avian influenza viruses using a MGB probe and an internal positive control. BMC Infect Dis 6: 87.
28. Bukh J (2011) Hepatitis C homolog in dogs with respiratory illness. Proc Natl Acad Sci USA 108: 12563-12564.
29. Zhao Z, Wang C, Xue Y, Tang X, Wu B, et al (2011) The occurrence of Bordetella bronchiseptica in pigs with clinical respiratory disease. Vet J 188: 337-340.
30. Priestnall SL, Erles K, Brooks HW, Cardwell JM, Waller AS, et al (2010) Characterization of pneumonia due to Streptococcus equi subsp. zooepidemicus in dogs. Clin Vaccine Immunol 17: 1790-1796.
31. Chalker VJ, Owen WM, Paterson C, Barker E, Brooks H, et al (2004) Mycoplasmas associated with canine infectious respiratory disease. Microbiology 150: 3491-3497. (Pubitemid 39406217)
32. Glineur SF, Renshaw RW, Percopo CM, Dyer KD, Dubovi EJ, et al (2013) Novel pneumoviruses (PnVs): Evolution and inflammatory pathology. Virology 443: 257-264.
33. Krempl CD, Lamirande EW, Collins PL (2005) Complete sequence of the RNA genome of pneumonia virus of mice (PVM). Virus Genes 30: 237-249.
34. Dibben O, Easton AJ (2007) Mutational analysis of the gene start sequences of pneumonia virus of mice. Virus Res 130: 303-309. (Pubitemid 350051102)
35. Mitchell JA, Cardwell JM, Renshaw RW, Dubovi EJ, Brownlie J (2013) The detection of canine pneumovirus in dogs with canine infectious respiratory disease. J Clin Microbiol doi:10.1128/JCM.02312-13.
36. Zenner L, Regnault JP (2000) Ten-year long monitoring of laboratory mouse and rat colonies in French facilities: A retrospective study. Lab Anim 34: 76-83. (Pubitemid 30060264)
37. Kaplan C, Healing TD, Evans N, Healing L, Prior A (1980) Evidence of infection by viruses in small British field rodents. J Hyg (Lond) 84: 285-294. (Pubitemid 10179848)
38. Greenwood AG, Sanchez S (2002) Serological evidence of murine pathogens in wild grey squirrels (Sciurus carolinensis) in North Wales. Vet Rec 150: 543-546. (Pubitemid 34464279)
39. Becker SD, Bennett M, Stewart JP, Hurst JL (2007) Serological survey of virus infection among wild house mice (Mus domesticus) in the UK. Lab Anim 41: 229-238. (Pubitemid 46733410)