Little to no genetic structure in the ectomycorrhizal basidiomycete Suillus spraguei (Syn. S. pictus) across parts of the northeastern USA

Mycorrhiza

Volumn 24, Issue 3, 2014, Pages 227-232

  Rivera, Yazmín ^a   Burchhardt, Kathleen M ^b   Kretzer, Annette M ^a  

^a STATE UNIVERSITY OF NEW YORK   (United States)

^b NORTH CAROLINA STATE UNIVERSITY   (United States)

Author keywords

Ectomycorrhizal fungi; Gene flow; Microsatellite markers; Suillus pictus

Indexed keywords

ECTOMYCORRHIZA; FOREST; FUNGUS; GENE FLOW; GENETIC DIFFERENTIATION; GENETIC STRUCTURE; TREE;

ADIRONDACK PARK; MASSACHUSETTS; NEW YORK [UNITED STATES]; PENNSYLVANIA; UNITED STATES;

BASIDIOMYCOTA; FUNGI; PINUS STROBUS; SUILLUS PICTUS; SUILLUS SPRAGUEI;

MICROSATELLITE DNA;

ARTICLE; BASIDIOMYCETES; CLASSIFICATION; GENETIC VARIABILITY; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MYCORRHIZA; PINE; UNITED STATES;

BASIDIOMYCOTA; GENETIC VARIATION; MICROSATELLITE REPEATS; MYCORRHIZAE; PINUS; SOUTHEASTERN UNITED STATES;

EID: 84896395880     PISSN: 09406360     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00572-013-0524-9     Document Type: Article

References (39)

1. Abrams MD (2001) Eastern white pine versatility in the presettlement forest. BioScience 51(11): 967-978.
2. Amend A, Garbelotto M, Fang Z, Keeley S (2010) Isolation by landscape in populations of a prized edible mushroom Tricholoma matsutake. Conserv Genet 11(3): 795-802.
3. Ashkannejhad S, Horton TR (2006) Ectomycorrhizal ecology under primary succession on coastal sand dunes: interactions involving Pinus contorta, suilloid fungi and deer. New Phytol 169(2): 345-354.
4. Bergemann SE, Miller SL (2002) Size, distribution, and persistence of genets in local populations of the late-stage ectomycorrhizal basidiomycete, Russula brevipes. New Phytol 156: 313-320.
5. Bergemann SE, Douhan GW, Garbelotto M, Miller SL (2006) No evidence of population structure across three isolated subpopulations of Russula brevipes in an oak/pine woodland. New Phytol 170: 177-184.
6. Burchhardt KM, Rivera Y, Baldwin T, VanEarden D, Kretzer A (2011) Analysis of genet size and local gene flow in the ectomycorrhizal basidiomycete Suillus spraguei (synonym S. pictus). Mycologia 103(4): 722-730.
7. Carriconde F, Gardes M, Jargeat P, Heilmann-Clausen J, Mouhamadou B, Gryta H (2008a) Population evidence of cryptic species and geographical structure in the cosmopolitan ectomycorrhizal fungus, Tricholoma scalpturatum. Microb Ecol 56(3): 513-524.
8. Carriconde F, Gryta H, Jargeat P, Mouhamadou B, Gardes M (2008b) High sexual reproduction and limited contemporary dispersal in the ectomycorrhizal fungus Tricholoma scalpturatum: new insights from population genetics and spatial autocorrelation analysis. Mol Ecol 17(20): 4433-4445.
9. Douhan GW, Vincenot L, Gryta H, Selosse MA (2011) Population genetics of ectomycorrhizal fungi: from current knowledge to emerging directions. Fungal Biol 115: 569-597.
10. Dunham S, O'Dell TE, Molina R (2006) Spatial analysis of within-population microsatellite variability reveals restricted gene flow in the Pacific golden chanterelle (Cantharellus formosus). Mycologia 98(2): 250-259.
11. Dunham SM, Mujic AB, Spatafora JW, Kretzer AM (2013) Within-population genetic structure differs between two sympatric sister-species of ectomycorrhizal fungi, Rhizopogon vinicolor and R. vesiculosus. Mycologia 105(4): 814-826.
12. Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14: 2611-2620.
13. Excoffier L, Smouse P, Quattro J (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
14. Foster DR, Motzkin G, Slater B (1998) Land-use history as long-term broad-scale disturbance: regional forest dynamics in central New England. Ecosystems 1: 96-119.
15. Glitzenstein J, Canham C, McDonnell M, Streng D (1990) Interactions between land-use history and environment in upland forests of the Cary Arboretum, Hudson Valley, New York. B Torrey Bot Club 117: 106-122.
16. Goudet J (2002) FSTAT, a program to estimate and test gene diversities and fixation indices (version 2. 9. 3. 2). http://www2. unil. ch/popgen/softwares/fstat. htm. Accessed 15 Mar 2013.
17. Goudet J, Raymond M, de-Meeus T, Rousset F (1996) Testing differentiation in diploid populations. Genetics 144: 1933-1940.
18. Grubisha LC, Bergemann SE, Bruns TD (2007) Host islands within the California Northern Channel Islands create fine-scale genetic structure in two sympatric species of the symbiotic ectomycorrhizal fungus Rhizopogon. Mol Ecol 16: 1811-1822.
19. Hale ML, Burg TM, Steeves TE (2012) Sampling for microsatellite-based population genetic studies: 25 to 30 individuals per population is enough to accurately estimate allele frequencies. PLoS ONE 7: e45170.
20. Hirose D, Kikuchi J, Kanzaki N, Futai K (2004) Genet distribution of sporocarps and ectomycorrhizas of Suillus pictus in a Japanese white pine plantation. New Phytol 164: 527-541.
21. Johnson CN (1996) Interactions between mammals and ectomycorrhizal fungi. Trends Ecol Evol 11(12): 503-507.
22. Kretzer AM, Dunham S, Molina R, Spatafora JW (2005) Patterns of vegetative growth and gene flow in Rhizopogon vinicolor and R. vesiculosus (Boletales, Basidiomycota). Mol Ecol 14: 2259-2268.
23. Landguth EL, Fedy BC, Oyler-McCance SJ, Garey AL, Emel SL, Mumma M, Wagner HH, Fortin MJ, Cushman SA (2012) Effects of sample size, number of markers, and allelic richness on the detection of spatial genetic pattern. Mol Ecol Resour 12: 276-284.
24. Ledig FT (1992) Human impacts on genetic diversity in forest ecosystems. Oikos 63: 87-108.
25. Muller LAH, Vangronsveld J, Colpaert JV (2007) Genetic structure of Suillus luteus populations in heavy metal polluted and non-polluted habitats. Mol Ecol 16(22): 4728-4737.
26. Murat C, Díez J, Luis P, Delaruelle C, Dupré C, Chevalier G, Bonfante P, Martin F (2004) Polymorphism at the ribosomal DNA ITS and its relation to postglacial re-colonization routes of the Perigord truffle Tuber melanosporum. New Phytol 164: 401-411.
27. Niering WA (1998) Forces that shaped the forests of the Northeastern United States. Northeast Nat 5(2): 99-110.
28. Peakall R, Smouse P (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
29. Pritchard J, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
30. Raymond M, Rousset F (1995) GENEPOP (version 1. 2): population genetics for exact tests and ecumenicism. J Hered 86: 248-249.
31. Rousset F (2008) Genepop'007: a complete reimplementation of the Genepop software for Windows and Linux. Mol Ecol Resour 8: 103-106.
32. Roy M, Dubois MP, Proffit M, Vincenot L, Desmarais E, Selosse MA (2008) Evidence from population genetics that the ectomycorrhizal basidiomycete Laccaria amethystina is an actual multihost symbiont. Mol Ecol 17(12): 2825-2838.
33. Rubini A, Paolocci F, Riccioni C, Vendramin GG, Arcioni S (2005) Genetic and phylogeographic structures of the symbiotic fungus Tuber magnatum. Appl Environ Microbiol 71(11): 6584-6589.
34. Smith BE, Marks PL, Gardescu S (1993) Two hundred years of forest cover changes in Tompkins County, New York. B Torrey Bot Club 120(3): 229-247.
35. Vincenot L, Nara K, Sthultz C, Labbe J, Dubois MP, Tedersoo L, Martin F, Selosse MA (2012) Extensive gene flow over Europe and possible speciation over Eurasia in the ectomycorrhizal basidiomycete Laccaria amethystina complex. Mol Ecol 21(2): 281-299.
36. Whitney GG, Davis W (1986) Thoreau and the forest history of Concord, Massachusetts. J For Hist 30: 70-81.
37. Wright S (1969) Evolution and the genetics of populations, Vol 2. The theory of gene frequencies. University of Chicago Press, Chicago.
38. Xu J, Sha T, Li YC, Zhao ZW, Yang ZL (2008) Recombination and genetic differentiation among natural populations of the ectomycorrhizal mushroom Tricholoma matsutake from southwestern China. Mol Ecol 17(5): 1238-1247.
39. Zhou Z, Miwa M, Hogetsu T (2001) Polymorphism of simple sequence repeats reveals gene flow within and between ectomycorrhizal Suillus grevillei populations. New Phytol 149(2): 339-348.