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Volumn 12, Issue 2, 2012, Pages 276-284

Effects of sample size, number of markers, and allelic richness on the detection of spatial genetic pattern

Author keywords

Causal modelling; Cdpop; Isolation by barrier; Isolation by distance; Isolation by landscape resistance; Partial Mantel test; Sampling; Simulation modelling

Indexed keywords


EID: 84856760886     PISSN: 1755098X     EISSN: 17550998     Source Type: Journal    
DOI: 10.1111/j.1755-0998.2011.03077.x     Document Type: Article
Times cited : (138)

References (28)
  • 1
    • 79551664558 scopus 로고    scopus 로고
    • Simulation modeling in landscape genetics: on the need to go further
    • Balkenhol N, Landguth EL (2011) Simulation modeling in landscape genetics: on the need to go further. Molecular Ecology, 20, 667-670.
    • (2011) Molecular Ecology , vol.20 , pp. 667-670
    • Balkenhol, N.1    Landguth, E.L.2
  • 2
    • 61849122372 scopus 로고    scopus 로고
    • Identifying future research needs in landscape genetics: where to from here?
    • Balkenhol N, Gugerli F, Cushman SA et al. (2009) Identifying future research needs in landscape genetics: where to from here? Landscape Ecology, 24, 455-463.
    • (2009) Landscape Ecology , vol.24 , pp. 455-463
    • Balkenhol, N.1    Gugerli, F.2    Cushman, S.A.3
  • 3
    • 0028184174 scopus 로고
    • High resolution of human evolutionary trees with polymorphic microsatellites
    • Bowcock AM, Ruiz-Linares A, Tomfohrde J et al. (1994) High resolution of human evolutionary trees with polymorphic microsatellites. Nature, 368, 455-457.
    • (1994) Nature , vol.368 , pp. 455-457
    • Bowcock, A.M.1    Ruiz-Linares, A.2    Tomfohrde, J.3
  • 4
    • 4344707906 scopus 로고    scopus 로고
    • Landscape connectivity influences gene flow in a roe deer population inhabiting a fragmented landscape: an individual-based approach
    • Coulon A, Cosson JF, Angibault JM et al. (2004) Landscape connectivity influences gene flow in a roe deer population inhabiting a fragmented landscape: an individual-based approach. Molecular Ecology, 13, 2841-2850.
    • (2004) Molecular Ecology , vol.13 , pp. 2841-2850
    • Coulon, A.1    Cosson, J.F.2    Angibault, J.M.3
  • 5
    • 33645878576 scopus 로고    scopus 로고
    • Genetic structure is influenced by landscape features: empirical evidence from a roe deer population
    • Coulon A, Guillot G, Cosson JF et al. (2006) Genetic structure is influenced by landscape features: empirical evidence from a roe deer population. Molecular Ecology, 15, 1669-1679.
    • (2006) Molecular Ecology , vol.15 , pp. 1669-1679
    • Coulon, A.1    Guillot, G.2    Cosson, J.F.3
  • 6
    • 77955731065 scopus 로고    scopus 로고
    • Spurious correlations and inference in landscape genetics
    • Cushman SA, Landguth EL (2010) Spurious correlations and inference in landscape genetics. Molecular Ecology, 19, 3592-3602.
    • (2010) Molecular Ecology , vol.19 , pp. 3592-3602
    • Cushman, S.A.1    Landguth, E.L.2
  • 7
  • 8
    • 77952095479 scopus 로고    scopus 로고
    • Utility of computer simulations in landscape genetics
    • Epperson BK, McRae BH, Scribner K et al. (2010) Utility of computer simulations in landscape genetics. Molecular Ecology, 19, 3549-3564.
    • (2010) Molecular Ecology , vol.19 , pp. 3549-3564
    • Epperson, B.K.1    McRae, B.H.2    Scribner, K.3
  • 9
    • 79953330958 scopus 로고    scopus 로고
    • ESRI (Environmental Systems Resource Institute) (), Redlands, California.
    • ESRI (Environmental Systems Resource Institute) (2009) ArcMap 9.2. ESRI, Redlands, California.
    • (2009) ArcMap 9.2. ESRI
  • 10
    • 33746343963 scopus 로고    scopus 로고
    • The impact of habitat loss and fragmentation on genetic drift and fixation time
    • Ezard THP, Travis JMJ (2006) The impact of habitat loss and fragmentation on genetic drift and fixation time. Oikos, 114, 367-375.
    • (2006) Oikos , vol.114 , pp. 367-375
    • Ezard, T.H.P.1    Travis, J.M.J.2
  • 11
    • 37649025929 scopus 로고    scopus 로고
    • The ecodist package for dissimilarity-based analysis of ecological data
    • Goslee SC, Urban DL (2007) The ecodist package for dissimilarity-based analysis of ecological data. Journal of Statistical Software, 22, 1-19.
    • (2007) Journal of Statistical Software , vol.22 , pp. 1-19
    • Goslee, S.C.1    Urban, D.L.2
  • 12
    • 35348931531 scopus 로고    scopus 로고
    • Space-time zero-inflated count models of Harbor seal
    • ver Hoef JM, Jansen JK (2007) Space-time zero-inflated count models of Harbor seal. Environmetrics, 18, 697-712.
    • (2007) Environmetrics , vol.18 , pp. 697-712
    • ver Hoef, J.M.1    Jansen, J.K.2
  • 13
    • 73349087810 scopus 로고    scopus 로고
    • CDPOP: a spatially explicit cost distance population genetics program
    • Landguth EL, Cushman SA (2010) CDPOP: a spatially explicit cost distance population genetics program. Molecular Ecology Resources, 10, 156-161.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 156-161
    • Landguth, E.L.1    Cushman, S.A.2
  • 15
    • 77955765927 scopus 로고    scopus 로고
    • Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data
    • Legendre P, Fortin M-J (2010) Comparison of the Mantel test and alternative approaches for detecting complex multivariate relationships in the spatial analysis of genetic data. Molecular Ecology Resources, 10, 831-844.
    • (2010) Molecular Ecology Resources , vol.10 , pp. 831-844
    • Legendre, P.1    Fortin, M.-J.2
  • 17
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209-220.
    • (1967) Cancer Research , vol.27 , pp. 209-220
    • Mantel, N.1
  • 18
    • 27444435432 scopus 로고    scopus 로고
    • Zero tolerance ecology: improving ecological inference by modeling the source of zero observations
    • Martin TG, Wintel BA, Thodes JR et al. (2005) Zero tolerance ecology: improving ecological inference by modeling the source of zero observations. Ecology Letters, 8, 1235-1246.
    • (2005) Ecology Letters , vol.8 , pp. 1235-1246
    • Martin, T.G.1    Wintel, B.A.2    Thodes, J.R.3
  • 19
    • 33750584310 scopus 로고    scopus 로고
    • Isolation by resistance
    • McRae BH (2006) Isolation by resistance. Evolution, 60, 1551-1561.
    • (2006) Evolution , vol.60 , pp. 1551-1561
    • McRae, B.H.1
  • 20
    • 58549095449 scopus 로고    scopus 로고
    • Representing genetic variation as continuous surfaces: an approach for identifying spatial dependency in landscape genetic studies
    • Murphy M, Evans J, Cushman S, Storfer A (2008) Representing genetic variation as continuous surfaces: an approach for identifying spatial dependency in landscape genetic studies. Ecography, 31, 685-697.
    • (2008) Ecography , vol.31 , pp. 685-697
    • Murphy, M.1    Evans, J.2    Cushman, S.3    Storfer, A.4
  • 21
    • 70149113077 scopus 로고    scopus 로고
    • R Development Core Team R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL
    • R Development Core Team (2009) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0, URL
    • (2009) R: A Language and Environment for Statistical Computing
  • 22
    • 61849171932 scopus 로고    scopus 로고
    • Why sampling scheme matters: the effect of sampling scheme on landscape genetic results
    • Schwartz MK, McKelvey KS (2009) Why sampling scheme matters: the effect of sampling scheme on landscape genetic results. Conservation Genetics, 10, 441-452.
    • (2009) Conservation Genetics , vol.10 , pp. 441-452
    • Schwartz, M.K.1    McKelvey, K.S.2
  • 23
    • 72449175939 scopus 로고    scopus 로고
    • Wolverine gene flow across a narrow climatic niche
    • Schwartz MK, Copeland JP, Anderson NJ et al. (2009) Wolverine gene flow across a narrow climatic niche. Ecology, 90, 3222-3232.
    • (2009) Ecology , vol.90 , pp. 3222-3232
    • Schwartz, M.K.1    Copeland, J.P.2    Anderson, N.J.3
  • 24
    • 77952096687 scopus 로고    scopus 로고
    • Applications of landscape genetics in conservation biology: concepts and challenges
    • Segelbacher G, Cushman SA, Epperson BK et al. (2010) Applications of landscape genetics in conservation biology: concepts and challenges. Conservation Genetics, 11, 375-385.
    • (2010) Conservation Genetics , vol.11 , pp. 375-385
    • Segelbacher, G.1    Cushman, S.A.2    Epperson, B.K.3
  • 25
    • 77956093703 scopus 로고    scopus 로고
    • Inferring landscape effects on gene flow: a new multi-scale model selection framework
    • Shirk AJ, Wallin DO, Cushman SA, Rice CG, Warheit KI (2010) Inferring landscape effects on gene flow: a new multi-scale model selection framework. Molecular Ecology, 19, 3603-3619.
    • (2010) Molecular Ecology , vol.19 , pp. 3603-3619
    • Shirk, A.J.1    Wallin, D.O.2    Cushman, S.A.3    Rice, C.G.4    Warheit, K.I.5
  • 26
    • 84963034277 scopus 로고
    • Multiple regression and correlation extensions of the Mantel test of matrix correspondence
    • Smouse PE et al. (1986) Multiple regression and correlation extensions of the Mantel test of matrix correspondence. Systematic Zoology, 35, 627-632.
    • (1986) Systematic Zoology , vol.35 , pp. 627-632
    • Smouse, P.E.1
  • 27
    • 77956082819 scopus 로고    scopus 로고
    • Use of resistance surfaces for landscape genetic studies: considerations for parameterization and analysis
    • Spear S, Balkenhol N, Fortin M-J, McRae B, Scribner K (2010) Use of resistance surfaces for landscape genetic studies: considerations for parameterization and analysis. Molecular Ecology, 19, 3576-3591.
    • (2010) Molecular Ecology , vol.19 , pp. 3576-3591
    • Spear, S.1    Balkenhol, N.2    Fortin, M.-J.3    McRae, B.4    Scribner, K.5
  • 28
    • 79955546353 scopus 로고    scopus 로고
    • The arcsine is asinine: the analysis of proportions in ecology
    • Warton DI, Hui FKC (2011) The arcsine is asinine: the analysis of proportions in ecology. Ecology, 92, 3-10.
    • (2011) Ecology , vol.92 , pp. 3-10
    • Warton, D.I.1    Hui, F.K.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.