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Volumn 73, Issue 1, 2014, Pages 60-64

Lobophylliidae (Cnidaria, Scleractinia) reshuffled: Pervasive non-monophyly at genus level

Author keywords

COI; Molecular systematic; Monophyly; Paraphyly; Phylogeny; RDNA

Indexed keywords

RIBOSOME DNA;

EID: 84896298325     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2014.01.010     Document Type: Article
Times cited : (40)

References (32)
  • 1
    • 84864567287 scopus 로고    scopus 로고
    • Molecular phylogeny of the Robust clade (Faviidae, Mussidae, Merulinidae, and Pectiniidae): an Indian Ocean perspective
    • Arrigoni R., Stefani F., Pichon M., Galli P., Benzoni F. Molecular phylogeny of the Robust clade (Faviidae, Mussidae, Merulinidae, and Pectiniidae): an Indian Ocean perspective. Mol. Phylogenet. Evol. 2012, 65:183-193.
    • (2012) Mol. Phylogenet. Evol. , vol.65 , pp. 183-193
    • Arrigoni, R.1    Stefani, F.2    Pichon, M.3    Galli, P.4    Benzoni, F.5
  • 2
    • 34249800104 scopus 로고    scopus 로고
    • Debating phylogenetic relationships of the scleractinian Psammocora: molecular and morphological evidences
    • Benzoni F., Stefani F., Stolarski J., Pichon M., Mitta G., Galli P. Debating phylogenetic relationships of the scleractinian Psammocora: molecular and morphological evidences. Contrib. Zool. 2007, 76:35-54.
    • (2007) Contrib. Zool. , vol.76 , pp. 35-54
    • Benzoni, F.1    Stefani, F.2    Stolarski, J.3    Pichon, M.4    Mitta, G.5    Galli, P.6
  • 3
    • 84856460069 scopus 로고    scopus 로고
    • Phylogeny of the coral genus Plesiastrea (Cnidaria, Scleractinia)
    • Benzoni F., Arrigoni R., Stefani F., Pichon M. Phylogeny of the coral genus Plesiastrea (Cnidaria, Scleractinia). Contrib. Zool. 2011, 80:231-249.
    • (2011) Contrib. Zool. , vol.80 , pp. 231-249
    • Benzoni, F.1    Arrigoni, R.2    Stefani, F.3    Pichon, M.4
  • 4
    • 84864534889 scopus 로고    scopus 로고
    • Phylogenetic position and taxonomy of Cycloseris explanulata anc C. wellsi (Scleractinia: Fungiidae): lost mushroom corals find their way home
    • Benzoni F., Arrigoni R., Stefani F., Reijnen B.T., Montano S., Hoeksema B.W. Phylogenetic position and taxonomy of Cycloseris explanulata anc C. wellsi (Scleractinia: Fungiidae): lost mushroom corals find their way home. Contrib. Zool. 2012, 81:125-146.
    • (2012) Contrib. Zool. , vol.81 , pp. 125-146
    • Benzoni, F.1    Arrigoni, R.2    Stefani, F.3    Reijnen, B.T.4    Montano, S.5    Hoeksema, B.W.6
  • 5
    • 84876452154 scopus 로고    scopus 로고
    • Systematics of the coral genus Craterastrea (Cnidaria, Anthozoa, Scleractinia) and description of a new family through combined morphological and molecular analyses
    • Benzoni F., Arrigoni R., Stefani F., Stolarski J. Systematics of the coral genus Craterastrea (Cnidaria, Anthozoa, Scleractinia) and description of a new family through combined morphological and molecular analyses. Syst. Biodivers. 2012, 10:417-433.
    • (2012) Syst. Biodivers. , vol.10 , pp. 417-433
    • Benzoni, F.1    Arrigoni, R.2    Stefani, F.3    Stolarski, J.4
  • 6
    • 62549112606 scopus 로고    scopus 로고
    • Searching for new morphological characters in the systematics of scleractinian reef corals: comparison of septal teeth and granules between Atlantic and Pacific Mussidae
    • Budd A.F., Stolarski J. Searching for new morphological characters in the systematics of scleractinian reef corals: comparison of septal teeth and granules between Atlantic and Pacific Mussidae. Acta Zool. 2009, 90:142-165.
    • (2009) Acta Zool. , vol.90 , pp. 142-165
    • Budd, A.F.1    Stolarski, J.2
  • 7
    • 78650057793 scopus 로고    scopus 로고
    • Corallite wall and septal microstructure in scleractinian reef corals: comparison of molecular clades within the family Faviidae
    • Budd A.F., Stolarski J. Corallite wall and septal microstructure in scleractinian reef corals: comparison of molecular clades within the family Faviidae. J. Morphol. 2011, 272:66-88.
    • (2011) J. Morphol. , vol.272 , pp. 66-88
    • Budd, A.F.1    Stolarski, J.2
  • 8
    • 84868138236 scopus 로고    scopus 로고
    • Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia)
    • Budd A.F., Fukami H., Smith N., Knowlton N. Taxonomic classification of the reef coral family Mussidae (Cnidaria: Anthozoa: Scleractinia). Zool. J. Linn. Soc. 2012, 166:465-529.
    • (2012) Zool. J. Linn. Soc. , vol.166 , pp. 465-529
    • Budd, A.F.1    Fukami, H.2    Smith, N.3    Knowlton, N.4
  • 11
  • 12
    • 1642277987 scopus 로고    scopus 로고
    • Geographic differences in species boundaries among members of the Montastraea annularis complex based on molecular and morphological markers
    • Fukami H., Budd A.F., Levitan D.R., Jara J., Kersanach R., Knowlton N. Geographic differences in species boundaries among members of the Montastraea annularis complex based on molecular and morphological markers. Evolution 2004, 58:324-337.
    • (2004) Evolution , vol.58 , pp. 324-337
    • Fukami, H.1    Budd, A.F.2    Levitan, D.R.3    Jara, J.4    Kersanach, R.5    Knowlton, N.6
  • 13
    • 52449129525 scopus 로고    scopus 로고
    • Mitochondrial and nuclear genes suggest that stony corals are monophyletic but most families of stony corals are not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria)
    • Fukami H., Chen C.A., Budd A.F., Collins A., Wallace C., Chuang Y.Y., Chen C., Dai C.F., Iwao K., Sheppard C., Knowlton N. Mitochondrial and nuclear genes suggest that stony corals are monophyletic but most families of stony corals are not (Order Scleractinia, Class Anthozoa, Phylum Cnidaria). PLoS ONE 2008, 3:e3222.
    • (2008) PLoS ONE , vol.3
    • Fukami, H.1    Chen, C.A.2    Budd, A.F.3    Collins, A.4    Wallace, C.5    Chuang, Y.Y.6    Chen, C.7    Dai, C.F.8    Iwao, K.9    Sheppard, C.10    Knowlton, N.11
  • 14
    • 79954421843 scopus 로고    scopus 로고
    • A molecularly based phylogeny reconstruction of mushroom corals (Scleractinia: Fungiidae) with taxonomic consequences and evolutionary implications for life history traits
    • Gittenberger A., Reijnen B.T., Hoeksema B.W. A molecularly based phylogeny reconstruction of mushroom corals (Scleractinia: Fungiidae) with taxonomic consequences and evolutionary implications for life history traits. Contrib. Zool. 2011, 80:107-132.
    • (2011) Contrib. Zool. , vol.80 , pp. 107-132
    • Gittenberger, A.1    Reijnen, B.T.2    Hoeksema, B.W.3
  • 15
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to phylogenies by maximum likelihood
    • Guindon S., Gascuel O. A simple, fast, and accurate algorithm to phylogenies by maximum likelihood. Syst. Biol. 2003, 52:696-704.
    • (2003) Syst. Biol. , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 16
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor analysis program for Windows 95/98/NT
    • Hall T.A. BioEdit: a user-friendly biological sequence alignment editor analysis program for Windows 95/98/NT. Nucl. Acids Symp. 1999, 41:95-98.
    • (1999) Nucl. Acids Symp. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 17
    • 33645574750 scopus 로고    scopus 로고
    • No variation and low synonymous substitution rates in coral mtDNA despite high nuclear variation
    • Hellberg M.E. No variation and low synonymous substitution rates in coral mtDNA despite high nuclear variation. BMC Evol. Biol. 2006, 6:24.
    • (2006) BMC Evol. Biol. , vol.6 , pp. 24
    • Hellberg, M.E.1
  • 18
    • 79551638659 scopus 로고    scopus 로고
    • Cleaning up the "Bigmessidae": molecular phylogeny of scleractinian corals from Faviidae, Merulinidae, Pectiniidae, and Trachyphylliidae
    • Huang D., Licuanan W.Y., Baird A.H., Fukami H. Cleaning up the "Bigmessidae": molecular phylogeny of scleractinian corals from Faviidae, Merulinidae, Pectiniidae, and Trachyphylliidae. BMC Evol. Biol. 2011, 11:37.
    • (2011) BMC Evol. Biol. , vol.11 , pp. 37
    • Huang, D.1    Licuanan, W.Y.2    Baird, A.H.3    Fukami, H.4
  • 19
    • 84867050830 scopus 로고    scopus 로고
    • The first modern solitary Agariciidae (Anthozoa, Scleractinia) revealed by molecular and microstructural analysis
    • Kitahara M.V., Stolarski J., Cairns S.D., Benzoni F., Stake J.L., Miller D.J. The first modern solitary Agariciidae (Anthozoa, Scleractinia) revealed by molecular and microstructural analysis. Invertebr. Syst. 2012, 26:303-315.
    • (2012) Invertebr. Syst. , vol.26 , pp. 303-315
    • Kitahara, M.V.1    Stolarski, J.2    Cairns, S.D.3    Benzoni, F.4    Stake, J.L.5    Miller, D.J.6
  • 20
    • 84873277477 scopus 로고    scopus 로고
    • Deltocyathiidae, an early diverging family of Robust corals (Anthozoa, Scleractinia)
    • Kitahara M.V., Cairns S.D., Stolarski J., Miller D.J. Deltocyathiidae, an early diverging family of Robust corals (Anthozoa, Scleractinia). Zool. Scr. 2012, 42:201-212.
    • (2012) Zool. Scr. , vol.42 , pp. 201-212
    • Kitahara, M.V.1    Cairns, S.D.2    Stolarski, J.3    Miller, D.J.4
  • 22
    • 84866535514 scopus 로고    scopus 로고
    • The diversity and biogeography of Western Indian Ocean reef-building corals
    • Obura D. The diversity and biogeography of Western Indian Ocean reef-building corals. PLoS ONE 2012, 7:e45013.
    • (2012) PLoS ONE , vol.7
    • Obura, D.1
  • 23
    • 0029668299 scopus 로고    scopus 로고
    • Evolution of scleractinian corals inferred from molecular systematics
    • Romano S.L., Palumbi S.R. Evolution of scleractinian corals inferred from molecular systematics. Science 1996, 271:640-642.
    • (1996) Science , vol.271 , pp. 640-642
    • Romano, S.L.1    Palumbi, S.R.2
  • 24
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 25
    • 0022497719 scopus 로고
    • Cell interactions and the control of gene activity during early development of Xenopus laevis
    • Sargent T.D., Jamrich M., Dawid I.B. Cell interactions and the control of gene activity during early development of Xenopus laevis. Dev. Biol. 1986, 114:238-246.
    • (1986) Dev. Biol. , vol.114 , pp. 238-246
    • Sargent, T.D.1    Jamrich, M.2    Dawid, I.B.3
  • 27
    • 0003474197 scopus 로고    scopus 로고
    • PAUP. Phylogenetic Analysis Using Parsimony (and other methods).
    • Version 4. Sinauer Associates, Sunderland, Massachusetts.
    • Swofford, D.L., 2003. PAUP. Phylogenetic Analysis Using Parsimony (and other methods). Version 4. Sinauer Associates, Sunderland, Massachusetts.
    • (2003)
    • Swofford, D.L.1
  • 28
    • 0031823676 scopus 로고    scopus 로고
    • A coralspecific primer for PCR amplifications of the internal transcribed spacer region in ribosomal DNA
    • Takabayashi M., Carter D.A., Loh W.K.W., Hoegh-Guldberg O. A coralspecific primer for PCR amplifications of the internal transcribed spacer region in ribosomal DNA. Mol. Ecol. 1998, 7:928-930.
    • (1998) Mol. Ecol. , vol.7 , pp. 928-930
    • Takabayashi, M.1    Carter, D.A.2    Loh, W.K.W.3    Hoegh-Guldberg, O.4
  • 30
    • 0002834866 scopus 로고
    • Scleractinia of Eastern Australia, III: families Agariciidae, Siderastreidae, Fungiidae, Oculinidae, Merulinidae, Mussidae, Pectiniidae, Caryophylliidae, Dendrophylliidae
    • Veron J.E.N., Pichon M. Scleractinia of Eastern Australia, III: families Agariciidae, Siderastreidae, Fungiidae, Oculinidae, Merulinidae, Mussidae, Pectiniidae, Caryophylliidae, Dendrophylliidae. Aust. Inst. Mar. Sci. Monogr. Ser. 1980, 4:1-433.
    • (1980) Aust. Inst. Mar. Sci. Monogr. Ser. , vol.4 , pp. 1-433
    • Veron, J.E.N.1    Pichon, M.2
  • 31
    • 33749653470 scopus 로고    scopus 로고
    • Analyses of the ribosomal internal transcribed spacers (ITS) and the 5.8S gene indicate that extremely high rDNA heterogeneity is a unique feature in the scleractinian coral genus Acropora (Scleractinia; Acroporidae)
    • Wei N.W.V., Wallace C.C., Dai C.F., Moothien Pillay K.R., Chen C.A. Analyses of the ribosomal internal transcribed spacers (ITS) and the 5.8S gene indicate that extremely high rDNA heterogeneity is a unique feature in the scleractinian coral genus Acropora (Scleractinia; Acroporidae). Zool. Stud. 2006, 45:404-418.
    • (2006) Zool. Stud. , vol.45 , pp. 404-418
    • Wei, N.W.V.1    Wallace, C.C.2    Dai, C.F.3    Moothien Pillay, K.R.4    Chen, C.A.5
  • 32
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Academic Press Inc, San Diego, California, A Guide to Methods and Application, M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.)
    • White T.J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols 1990, 315-322. Academic Press Inc, San Diego, California, A Guide to Methods and Application. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
    • (1990) PCR Protocols , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4


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