메뉴 건너뛰기




Volumn 2014, Issue , 2014, Pages

Sparse representation for tumor classification based on feature extraction using latent low-rank representation

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CLINICAL EFFECTIVENESS; COMPARATIVE STUDY; DATA EXTRACTION; GENE EXPRESSION; HUMAN; LEAST ABSOLUTE SHRINKAGE AND SELECTION OPERATOR; MACHINE LEARNING; NOISE REDUCTION; SPARSE REPRESENTATION CLASSIFICATION; SUPPORT VECTOR MACHINE; TUMOR CLASSIFICATION; TUMOR MODEL; ALGORITHM; CLASSIFICATION; DATA BASE; GENETICS; NEOPLASM; TUMOR GENE;

EID: 84896109587     PISSN: 23146133     EISSN: 23146141     Source Type: Journal    
DOI: 10.1155/2014/420856     Document Type: Article
Times cited : (17)

References (44)
  • 1
    • 78650970907 scopus 로고    scopus 로고
    • SNP discovery in the bovine milk transcriptome using RNA-Seq technology
    • 2-s2.0-78650970907 10.1007/s00335-010-9297-z
    • Cánovas A., Rincon G., Islas-Trejo A., Wickramasinghe S., Medrano J. F., SNP discovery in the bovine milk transcriptome using RNA-Seq technology. Mammalian Genome 2010 21 11-12 592 598 2-s2.0-78650970907 10.1007/s00335-010- 9297-z
    • (2010) Mammalian Genome , vol.21 , Issue.11-12 , pp. 592-598
    • Cánovas, A.1    Rincon, G.2    Islas-Trejo, A.3    Wickramasinghe, S.4    Medrano, J.F.5
  • 4
    • 27744601822 scopus 로고    scopus 로고
    • Improving molecular cancer class discovery through sparse non-negative matrix factorization
    • DOI 10.1093/bioinformatics/bti653
    • Gao Y., Church G., Improving molecular cancer class discovery through sparse non-negative matrix factorization. Bioinformatics 2005 21 21 3970 3975 2-s2.0-27744601822 10.1093/bioinformatics/bti653 (Pubitemid 41631836)
    • (2005) Bioinformatics , vol.21 , Issue.21 , pp. 3970-3975
    • Gao, Y.1    Church, G.2
  • 5
    • 33747865502 scopus 로고    scopus 로고
    • Independent component analysis-based penalized discriminant method for tumor classification using gene expression data
    • DOI 10.1093/bioinformatics/btl190
    • Huang D. S., Zheng C. H., Independent component analysis-based penalized discriminant method for tumor classification using gene expression data. Bioinformatics 2006 22 15 1855 1862 2-s2.0-33747865502 10.1093/bioinformatics/ btl190 (Pubitemid 44283030)
    • (2006) Bioinformatics , vol.22 , Issue.15 , pp. 1855-1862
    • Huang, D.-S.1    Zheng, C.-H.2
  • 6
    • 67549128839 scopus 로고    scopus 로고
    • Prediction of cancer Class with majority voting genetic programming classifier using gene expression data
    • 2-s2.0-67549128839 10.1109/TCBB.2007.70245
    • Paul T. K., Iba H., Prediction of cancer Class with majority voting genetic programming classifier using gene expression data. IEEE/ACM Transactions on Computational Biology and Bioinformatics 2009 6 2 353 367 2-s2.0-67549128839 10.1109/TCBB.2007.70245
    • (2009) IEEE/ACM Transactions on Computational Biology and Bioinformatics , vol.6 , Issue.2 , pp. 353-367
    • Paul, T.K.1    Iba, H.2
  • 8
    • 0033636139 scopus 로고    scopus 로고
    • Support vector machine classification and validation of cancer tissue samples using microarray expression data
    • 2-s2.0-0033636139
    • Furey T. S., Cristianini N., Duffy N., Bednarski D. W., Schummer M., Haussler D., Support vector machine classification and validation of cancer tissue samples using microarray expression data. Bioinformatics 2000 16 10 906 914 2-s2.0-0033636139
    • (2000) Bioinformatics , vol.16 , Issue.10 , pp. 906-914
    • Furey, T.S.1    Cristianini, N.2    Duffy, N.3    Bednarski, D.W.4    Schummer, M.5    Haussler, D.6
  • 9
    • 84890032753 scopus 로고    scopus 로고
    • Ontology-aware classification of tissue and cell-type signals in gene expression profiles across platforms and technologies
    • Lee Y. S., Krishnan A., Zhu Q., Troyanskaya O. G., Ontology-aware classification of tissue and cell-type signals in gene expression profiles across platforms and technologies. Bioinformatics 2013 29 23 3036 3044
    • (2013) Bioinformatics , vol.29 , Issue.23 , pp. 3036-3044
    • Lee, Y.S.1    Krishnan, A.2    Zhu, Q.3    Troyanskaya, O.G.4
  • 10
    • 84887845794 scopus 로고    scopus 로고
    • MicroRNA-based molecular classification of non-BRCA1/2 hereditary breast tumours
    • Tanic M., Andress E., Rodriguez-Pinilla S. M., MicroRNA-based molecular classification of non-BRCA1/2 hereditary breast tumours. British Journal of Cancer 2013 109 10 2724 2734
    • (2013) British Journal of Cancer , vol.109 , Issue.10 , pp. 2724-2734
    • Tanic, M.1    Andress, E.2    Rodriguez-Pinilla, S.M.3
  • 11
    • 84888069055 scopus 로고    scopus 로고
    • Rsing random forest to classify T-cell epitopes based on amino acid properties and molecular features
    • Huang J. H., Xie H. L., Yan J., Lu H. M., Xu Q. S., Liang Y. Z., Rsing random forest to classify T-cell epitopes based on amino acid properties and molecular features. Analytica Chimica Acta 2013 804 70 75
    • (2013) Analytica Chimica Acta , vol.804 , pp. 70-75
    • Huang, J.H.1    Xie, H.L.2    Yan, J.3    Lu, H.M.4    Xu, Q.S.5    Liang, Y.Z.6
  • 12
    • 84881274931 scopus 로고    scopus 로고
    • Acomparison of methods for extracting information from the co-occurrence matrix for subcellular classification
    • Nanni L., Brahnam S., Ghidoni S., Menegatti E., Barrier T., Acomparison of methods for extracting information from the co-occurrence matrix for subcellular classification. Expert Systems with Applications 2013 40 18 7457 7467
    • (2013) Expert Systems with Applications , vol.40 , Issue.18 , pp. 7457-7467
    • Nanni, L.1    Brahnam, S.2    Ghidoni, S.3    Menegatti, E.4    Barrier, T.5
  • 13
    • 84890054846 scopus 로고    scopus 로고
    • Utilising non-consensus pathology measurements to improve the diagnosis of oesophageal cancer using a raman spectroscopic probe
    • 10.1039/C3AN01163A
    • Lioyd G. R., Almond L. M., Stone N., Shepherd N., Sanders S., Hutchings J., Barr H., Kendall C., Utilising non-consensus pathology measurements to improve the diagnosis of oesophageal cancer using a raman spectroscopic probe. The Analyst 2014 139 2 381 388 10.1039/C3AN01163A
    • (2014) The Analyst , vol.139 , Issue.2 , pp. 381-388
    • Lioyd, G.R.1    Almond, L.M.2    Stone, N.3    Shepherd, N.4    Sanders, S.5    Hutchings, J.6    Barr, H.7    Kendall, C.8
  • 14
    • 84882372688 scopus 로고    scopus 로고
    • A mass classification using spatial diversity approaches in mammography images for false positive reduction
    • Braz G., da Rocha S. V., Gattass M., Silva A. C., de Paiva A. C., A mass classification using spatial diversity approaches in mammography images for false positive reduction. Expert Systems with Applications 2013 40 18 7534 7543
    • (2013) Expert Systems with Applications , vol.40 , Issue.18 , pp. 7534-7543
    • Braz, G.1    Da Rocha, S.V.2    Gattass, M.3    Silva, A.C.4    De Paiva, A.C.5
  • 15
    • 0035273106 scopus 로고    scopus 로고
    • Atomic decomposition by basis pursuit
    • DOI 10.1137/S003614450037906X, PII S003614450037906X
    • Chen S. S., Donoho D. L., Saunders M. A., Atomic decomposition by basis pursuit. SIAM Review 2001 43 1 129 159 2-s2.0-0035273106 10.1137/ S003614450037906X (Pubitemid 32406896)
    • (2001) SIAM Review , vol.43 , Issue.1 , pp. 129-159
    • Chen, S.S.1    Donoho, D.L.2    Saunders, M.A.3
  • 16
    • 33645712892 scopus 로고    scopus 로고
    • Compressed sensing
    • 2-s2.0-33645712892 10.1109/TIT.2006.871582
    • Donoho D. L., Compressed sensing. IEEE Transactions on Information Theory 2006 52 4 1289 1306 2-s2.0-33645712892 10.1109/TIT.2006.871582
    • (2006) IEEE Transactions on Information Theory , vol.52 , Issue.4 , pp. 1289-1306
    • Donoho, D.L.1
  • 18
    • 85162001561 scopus 로고    scopus 로고
    • Proceedings of the 22nd Annual Conference on Neural Information Processing Systems (NIPS '09) 2009 2-s2.0-84858761801
    • Mairal J., Bach F., Ponce J., Sapiro G., Zisserman A., Supervised dictionary learning. Proceedings of the 22nd Annual Conference on Neural Information Processing Systems (NIPS '09) 2009 2-s2.0-84858761801
    • Supervised Dictionary Learning
    • Mairal, J.1    Bach, F.2    Ponce, J.3    Sapiro, G.4    Zisserman, A.5
  • 20
    • 84863042818 scopus 로고    scopus 로고
    • Proceedings of the IEEE International Conference on Computer Vision (ICCV '11) November 2011 Barcelona, Spain 2-s2.0-84856678308 10.1109/ICCV.2011. 6126422
    • Liu G., Yan S. C., Latent low-rank representation for subspace segmentation and feature extraction. Proceedings of the IEEE International Conference on Computer Vision (ICCV '11) November 2011 Barcelona, Spain 1615 1622 2-s2.0-84856678308 10.1109/ICCV.2011.6126422
    • Latent Low-rank Representation for Subspace Segmentation and Feature Extraction , pp. 1615-1622
    • Liu, G.1    Yan, S.C.2
  • 21
    • 77956529193 scopus 로고    scopus 로고
    • Proceedings of the 27th International Conference on Machine Learning (ICML '10) 2010 2-s2.0-77956529193
    • Liu G. C., Lin Z. C., Yu Y., Robust subspace segmentation by low-rank representation. Proceedings of the 27th International Conference on Machine Learning (ICML '10) 2010 663 670 2-s2.0-77956529193
    • Robust Subspace Segmentation by Low-rank Representation , pp. 663-670
    • Liu, G.C.1    Lin, Z.C.2    Yu, Y.3
  • 22
    • 84954519713 scopus 로고    scopus 로고
    • Exact subspace segmentation and outlier detection by low-rank representation
    • Liu G. C., Xu H., Yan S. C., Exact subspace segmentation and outlier detection by low-rank representation. JMLR: Workshop and Conference Proceedings 2012 22 703 711
    • (2012) JMLR: Workshop and Conference Proceedings , vol.22 , pp. 703-711
    • Liu, G.C.1    Xu, H.2    Yan, S.C.3
  • 24
    • 31744440684 scopus 로고    scopus 로고
    • Robust uncertainty principles: Exact signal reconstruction from highly incomplete frequency information
    • DOI 10.1109/TIT.2005.862083
    • Candès E. J., Romberg J., Tao T., Robust uncertainty principles: exact signal reconstruction from highly incomplete frequency information. IEEE Transactions on Information Theory 2006 52 2 489 509 2-s2.0-31744440684 10.1109/TIT.2005.862083 (Pubitemid 43174093)
    • (2006) IEEE Transactions on Information Theory , vol.52 , Issue.2 , pp. 489-509
    • Candes, E.J.1    Romberg, J.2    Tao, T.3
  • 25
    • 33947416035 scopus 로고    scopus 로고
    • Near-optimal signal recovery from random projections: Universal encoding strategies?
    • DOI 10.1109/TIT.2006.885507
    • Candes E. J., Tao T., Near-optimal signal recovery from random projections: universal encoding strategies? IEEE Transactions on Information Theory 2006 52 12 5406 5425 2-s2.0-33947416035 10.1109/TIT.2006.885507 (Pubitemid 46445381)
    • (2006) IEEE Transactions on Information Theory , vol.52 , Issue.12 , pp. 5406-5425
    • Candes, E.J.1    Tao, T.2
  • 26
    • 79955040218 scopus 로고    scopus 로고
    • Regression shrinkage and selection via the lasso: A retrospective
    • 2-s2.0-79955040218 10.1111/j.1467-9868.2011.00771.x
    • Tibshirani R., Regression shrinkage and selection via the lasso: a retrospective. Journal of the Royal Statistical Society B 2011 73 3 273 282 2-s2.0-79955040218 10.1111/j.1467-9868.2011.00771.x
    • (2011) Journal of the Royal Statistical Society B , vol.73 , Issue.3 , pp. 273-282
    • Tibshirani, R.1
  • 28
    • 77952741387 scopus 로고    scopus 로고
    • Matrix completion with noise
    • 2-s2.0-77952741387 10.1109/JPROC.2009.2035722
    • Candes E. J., Plan Y., Matrix completion with noise. Proceedings of the IEEE 2010 98 6 925 936 2-s2.0-77952741387 10.1109/JPROC.2009.2035722
    • (2010) Proceedings of the IEEE , vol.98 , Issue.6 , pp. 925-936
    • Candes, E.J.1    Plan, Y.2
  • 29
    • 71049116435 scopus 로고    scopus 로고
    • Exact matrix completion via convex optimization
    • 2-s2.0-71049116435 10.1007/s10208-009-9045-5
    • Candès E. J., Recht B., Exact matrix completion via convex optimization. Foundations of Computational Mathematics 2009 9 6 717 772 2-s2.0-71049116435 10.1007/s10208-009-9045-5
    • (2009) Foundations of Computational Mathematics , vol.9 , Issue.6 , pp. 717-772
    • Candès, E.J.1    Recht, B.2
  • 32
    • 79951739650 scopus 로고    scopus 로고
    • Proceedings of the 10th IEEE International Conference on Data Mining Workshops (ICDMW '10) December 2010 Sydney, Australia 2-s2.0-79951739650 10.1109/ICDMW.2010.64
    • Ni Y., Sun J., Yuan X., Yan S., Cheong L. F., Robust low-rank subspace segmentation with semidefinite guarantees. Proceedings of the 10th IEEE International Conference on Data Mining Workshops (ICDMW '10) December 2010 Sydney, Australia 1179 1188 2-s2.0-79951739650 10.1109/ICDMW.2010.64
    • Robust Low-rank Subspace Segmentation with Semidefinite Guarantees , pp. 1179-1188
    • Ni, Y.1    Sun, J.2    Yuan, X.3    Yan, S.4    Cheong, L.F.5
  • 34
    • 65349171459 scopus 로고    scopus 로고
    • Sparse representation for classification of tumors using gene expression data
    • 2-s2.0-65349171459 10.1155/2009/403689 403689
    • Hang X., Wu F. X., Sparse representation for classification of tumors using gene expression data. Journal of Biomedicine and Biotechnology 2009 2009 6 2-s2.0-65349171459 10.1155/2009/403689 403689
    • (2009) Journal of Biomedicine and Biotechnology , vol.2009 , pp. 6
    • Hang, X.1    Wu, F.X.2
  • 35
    • 27744565003 scopus 로고    scopus 로고
    • Classification and selection of biomarkers in genomic data using LASSO
    • DOI 10.1155/JBB.2005.147
    • Ghosh D., Chinnaiyan A. M., Classification and selection of biomarkers in genomic data using LASSO. Journal of Biomedicine and Biotechnology 2005 2005 2 147 154 2-s2.0-27744565003 10.1155/JBB.2005.147 (Pubitemid 41627871)
    • (2005) Journal of Biomedicine and Biotechnology , vol.2005 , Issue.2 , pp. 147-154
    • Ghosh, D.1    Chinnaiyan, A.M.2
  • 36
    • 15844413351 scopus 로고    scopus 로고
    • A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis
    • DOI 10.1093/bioinformatics/bti033
    • Statnikov A., Aliferis C. F., Tsamardinos I., Hardin D., Levy S., A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis. Bioinformatics 2005 21 5 631 643 2-s2.0-15844413351 10.1093/bioinformatics/bti033 (Pubitemid 40424789)
    • (2005) Bioinformatics , vol.21 , Issue.5 , pp. 631-643
    • Statnikov, A.1    Aliferis, C.F.2    Tsamardinos, I.3    Hardin, D.4    Levy, S.5
  • 37
    • 10244252786 scopus 로고    scopus 로고
    • Systematic benchmarking of microarray data classification: Assessing the role of non-linearity and dimensionality reduction
    • DOI 10.1093/bioinformatics/bth383
    • Pochet N., de Smet F., Suykens J. A. K., de Moor B. L. R., Systematic benchmarking of microarray data classification: assessing the role of non-linearity and dimensionality reduction. Bioinformatics 2004 20 17 3185 3195 2-s2.0-10244252786 10.1093/bioinformatics/bth383 (Pubitemid 39619208)
    • (2004) Bioinformatics , vol.20 , Issue.17 , pp. 3185-3195
    • Pochet, N.1    De Smet, F.2    Suykens, J.A.K.3    De Moor, B.L.R.4
  • 38
    • 0033536012 scopus 로고    scopus 로고
    • Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays
    • DOI 10.1073/pnas.96.12.6745
    • Alon U., Barka N., Notterman D. A., Gish K., Ybarra S., Mack D., Levine A. J., Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays. Proceedings of the National Academy of Sciences of the United States of America 1999 96 12 6745 6750 2-s2.0-0033536012 10.1073/pnas.96.12.6745 (Pubitemid 29274954)
    • (1999) Proceedings of the National Academy of Sciences of the United States of America , vol.96 , Issue.12 , pp. 6745-6750
    • Alon, U.1    Barka, N.2    Notterman, D.A.3    Gish, K.4    Ybarra, S.5    Mack, D.6    Levine, A.J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.