-
1
-
-
84862977387
-
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
-
Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martinez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Gorecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kues U, Kumar TK, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-Duenas FJ, Sabat G, Salamov A, et al. 2012. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science 336:1715-1719. http://dx.doi.org/10.1126 /science.1221748.
-
(2012)
Science
, vol.336
, pp. 1715-1719
-
-
Floudas, D.1
Binder, M.2
Riley, R.3
Barry, K.4
Blanchette, R.A.5
Henrissat, B.6
Martinez, A.T.7
Otillar, R.8
Spatafora, J.W.9
Yadav, J.S.10
Aerts, A.11
Benoit, I.12
Boyd, A.13
Carlson, A.14
Copeland, A.15
Coutinho, P.M.16
de Vries, R.P.17
Ferreira, P.18
Findley, K.19
Foster, B.20
Gaskell, J.21
Glotzer, D.22
Gorecki, P.23
Heitman, J.24
Hesse, C.25
Hori, C.26
Igarashi, K.27
Jurgens, J.A.28
Kallen, N.29
Kersten, P.30
Kohler, A.31
Kues, U.32
Kumar, T.K.33
Kuo, A.34
LaButti, K.35
Larrondo, L.F.36
Lindquist, E.37
Ling, A.38
Lombard, V.39
Lucas, S.40
Lundell, T.41
Martin, R.42
McLaughlin, D.J.43
Morgenstern, I.44
Morin, E.45
Murat, C.46
Nagy, L.G.47
Nolan, M.48
Ohm, R.A.49
Patyshakuliyeva, A.50
Rokas, A.51
Ruiz-Duenas, F.J.52
Sabat, G.53
Salamov, A.54
more..
-
2
-
-
0026381303
-
Delignification by wood-decay fungi
-
Blanchette R. 1991. Delignification by wood-decay fungi. Annu. Rev. Phytopathol. 29:381-398. http://dx.doi.org/10.1146/annurev.py.29.090191 .002121.
-
(1991)
Annu. Rev. Phytopathol.
, vol.29
, pp. 381-398
-
-
Blanchette, R.1
-
3
-
-
84945052849
-
Evaluating isolates of Phanerochaete chrysosporium and Ceriporiopsis subvermispora for use in biological pulping processes
-
Blanchette RA, Burnes TA, Eerdmans MM, Akhtar M. 1992. Evaluating isolates of Phanerochaete chrysosporium and Ceriporiopsis subvermispora for use in biological pulping processes. Holzforschung 46:109-115. http: //dx.doi.org/10.1515/hfsg.1992.46.2.109.
-
(1992)
Holzforschung
, vol.46
, pp. 109-115
-
-
Blanchette, R.A.1
Burnes, T.A.2
Eerdmans, M.M.3
Akhtar, M.4
-
4
-
-
84941842378
-
Assessment of 30 white rot basidiomycetes for selective lignin degradation
-
Otjen L, Blanchette R, Effland M, Leatham G. 1987. Assessment of 30 white rot basidiomycetes for selective lignin degradation. Holzforschung 41:343-349. http://dx.doi.org/10.1515/hfsg.1987.41.6.343.
-
(1987)
Holzforschung
, vol.41
, pp. 343-349
-
-
Otjen, L.1
Blanchette, R.2
Effland, M.3
Leatham, G.4
-
5
-
-
79960107735
-
Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species
-
Vanden Wymelenberg A, Gaskell J, Mozuch M, BonDurant SS, Sabat G, Ralph J, Skyba O, Mansfield SD, Blanchette RA, Grigoriev IV, Kersten PJ, Cullen D. 2011. Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species. Appl. Environ. Microbiol. 77:4499-4507. http://dx.doi.org /10.1128/AEM.00508-11.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 4499-4507
-
-
Vanden Wymelenberg, A.1
Gaskell, J.2
Mozuch, M.3
BonDurant, S.S.4
Sabat, G.5
Ralph, J.6
Skyba, O.7
Mansfield, S.D.8
Blanchette, R.A.9
Grigoriev, I.V.10
Kersten, P.J.11
Cullen, D.12
-
6
-
-
77953074402
-
Comparative transcriptome and secretome analysis of wood decay fungi Postia placenta and Phanerochaete chrysosporium
-
Vanden Wymelenberg A, Gaskell J, Mozuch MD, Sabat G, Ralph J, Skyba O, Mansfield S, Blanchette RA, Martinez D, Grigoriev I, Kersten P, Cullen D. 2010. Comparative transcriptome and secretome analysis of wood decay fungi Postia placenta and Phanerochaete chrysosporium. Appl. Environ. Microbiol. 76:3599-3610. http://dx.doi.org/10.1128/AEM .00058-10.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 3599-3610
-
-
Vanden Wymelenberg, A.1
Gaskell, J.2
Mozuch, M.D.3
Sabat, G.4
Ralph, J.5
Skyba, O.6
Mansfield, S.7
Blanchette, R.A.8
Martinez, D.9
Grigoriev, I.10
Kersten, P.11
Cullen, D.12
-
7
-
-
0027247475
-
Ligninolysis by a purified lignin peroxidase
-
Hammel K, Jensen K, Mozuch M, Landucci L, Tien M, Pease E. 1993. Ligninolysis by a purified lignin peroxidase. J. Biol. Chem. 268:12274-12281.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 12274-12281
-
-
Hammel, K.1
Jensen, K.2
Mozuch, M.3
Landucci, L.4
Tien, M.5
Pease, E.6
-
8
-
-
0026010999
-
Depolymerization of a synthetic lignin in vitro by lignin peroxidase
-
Hammel KE, Moen MA. 1991. Depolymerization of a synthetic lignin in vitro by lignin peroxidase. Enzyme Microb. Technol. 13:15-18. http://dx .doi.org/10.1016/0141-0229(91)90182-A.
-
(1991)
Enzyme Microb. Technol.
, vol.13
, pp. 15-18
-
-
Hammel, K.E.1
Moen, M.A.2
-
9
-
-
0025769643
-
In vitro depolymerization of lignin by manganese peroxidase of Phanerochaete chrysosporium
-
Wariishi H, Valli K, Gold MH. 1991. In vitro depolymerization of lignin by manganese peroxidase of Phanerochaete chrysosporium. Biochem. Biophys. Res. Commun. 176:269-275. http://dx.doi.org/10.1016/0006 -291X(91)90919-X.
-
(1991)
Biochem. Biophys. Res. Commun.
, vol.176
, pp. 269-275
-
-
Wariishi, H.1
Valli, K.2
Gold, M.H.3
-
10
-
-
0028340896
-
2 during wood degradation by Phanerochaete chrysosporium, Trametes versicolor, and Oudemansiella mucida
-
2 during wood degradation by Phanerochaete chrysosporium, Trametes versicolor, and Oudemansiella mucida. Appl. Environ. Microbiol. 60: 2524-2532.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 2524-2532
-
-
Daniel, G.1
Volc, J.2
Kubatova, E.3
-
12
-
-
0026662089
-
Substrate specificity and properties of the aryl-alcohol oxidase from the ligninolytic fungus Pleurotus eryngii
-
Guillén F, Martinez AT, Martinez MJ. 1992. Substrate specificity and properties of the aryl-alcohol oxidase from the ligninolytic fungus Pleurotus eryngii. Eur. J. Biochem. 209:603-611. http://dx.doi.org/10.1111/j .1432-1033.1992.tb17326.x.
-
(1992)
Eur. J. Biochem.
, vol.209
, pp. 603-611
-
-
Guillén, F.1
Martinez, A.T.2
Martinez, M.J.3
-
13
-
-
0023264566
-
2 production by Phanerochaete chrysosporium
-
2 production by Phanerochaete chrysosporium. J. Bacteriol. 169:2195-2201.
-
(1987)
J. Bacteriol.
, vol.169
, pp. 2195-2201
-
-
Kersten, P.J.1
Kirk, T.K.2
-
14
-
-
84875193804
-
Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes
-
Levasseur A, Drula E, Lombard V, Coutinho PM, Henrissat B. 2013. Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. Biotechnol. Biofuels 6:41. http://dx.doi.org/10 .1186/1754-6834-6-41.
-
(2013)
Biotechnol. Biofuels
, vol.6
, pp. 41
-
-
Levasseur, A.1
Drula, E.2
Lombard, V.3
Coutinho, P.M.4
Henrissat, B.5
-
15
-
-
84891763855
-
The carbohydrate-active enzymes database (CAZy) in 2013
-
Lombard V, Golaconda Ramulu H, Drula E, Coutinho PM, Henrissat B. 2014. The carbohydrate-active enzymes database (CAZy) in 2013. Nucleic Acids Res. 42:D490-D495. http://dx.doi.org/10.1093/nar/gkt1178.
-
(2014)
Nucleic Acids Res.
, vol.42
-
-
Lombard, V.1
Golaconda Ramulu, H.2
Drula, E.3
Coutinho, P.M.4
Henrissat, B.5
-
16
-
-
0028036741
-
Isozymes of manganese-dependent peroxidase and laccase produced by the lignindegrading basidiomycete Ceriporiopsis subvermispora
-
Lobos S, Larrain J, Salas L, Cullen D, Vicuna R. 1994. Isozymes of manganese-dependent peroxidase and laccase produced by the lignindegrading basidiomycete Ceriporiopsis subvermispora. Microbiology 140: 2691-2698. http://dx.doi.org/10.1099/00221287-140-10-2691.
-
(1994)
Microbiology
, vol.140
, pp. 2691-2698
-
-
Lobos, S.1
Larrain, J.2
Salas, L.3
Cullen, D.4
Vicuna, R.5
-
17
-
-
0029014670
-
Properties of laccase isoenzymes produced by the basidiomycete Ceriporiopsis subvermispora
-
Salas C, Lobos S, Larrain J, Salas L, Cullen D, Vicuna R. 1995. Properties of laccase isoenzymes produced by the basidiomycete Ceriporiopsis subvermispora. Biotechnol. Appl. Biochem. 21:323-333.
-
(1995)
Biotechnol. Appl. Biochem.
, vol.21
, pp. 323-333
-
-
Salas, C.1
Lobos, S.2
Larrain, J.3
Salas, L.4
Cullen, D.5
Vicuna, R.6
-
18
-
-
0002221484
-
Ligninolytic enzymes of the white rot basidiomycetes Phlebia brevispora and Ceriporiopsis subvermispora
-
Ruttimann C, Schwember E, Salas L, Cullen D, Vicuna R. 1992. Ligninolytic enzymes of the white rot basidiomycetes Phlebia brevispora and Ceriporiopsis subvermispora. Biotechnol. Appl. Biochem. 16:64-76.
-
(1992)
Biotechnol. Appl. Biochem.
, vol.16
, pp. 64-76
-
-
Ruttimann, C.1
Schwember, E.2
Salas, L.3
Cullen, D.4
Vicuna, R.5
-
19
-
-
0027942301
-
Oxidative degradation of non-phenolic lignin during lipid peroxidation by fungal manganese peroxidase
-
Bao W, Fukushima Y, Jensen KA, Moen MA, Hammel KE. 1994. Oxidative degradation of non-phenolic lignin during lipid peroxidation by fungal manganese peroxidase. FEBS Lett. 354:297-300. http://dx.doi .org/10.1016/0014-5793(94)01146-X.
-
(1994)
FEBS Lett.
, vol.354
, pp. 297-300
-
-
Bao, W.1
Fukushima, Y.2
Jensen, K.A.3
Moen, M.A.4
Hammel, K.E.5
-
20
-
-
84859466995
-
Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis
-
Fernandez-Fueyo E, Ruiz-Duenas FJ, Ferreira P, Floudas D, Hibbett DS, Canessa P, Larrondo LF, James TY, Seelenfreund D, Lobos S, Polanco R, Tello M, Honda Y, Watanabe T, Ryu JS, Kubicek CP, Schmoll M, Gaskell J, Hammel KE, St John FJ, Vanden Wymelenberg A, Sabat G, Splinter BonDurant S, Syed K, Yadav JS, Doddapaneni H, Subramanian V, Lavin JL, Oguiza JA, Perez G, Pisabarro AG, Ramirez L, Santoyo F, Master E, Coutinho PM, Henrissat B, Lombard V, Magnuson JK, Kues U, Hori C, Igarashi K, Samejima M, Held BW, Barry KW, LaButti KM, Lapidus A, Lindquist EA, Lucas SM, Riley R, Salamov AA, Hoffmeister D, Schwenk D, Hadar Y, Yarden O, et al. 2012. Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. Proc. Natl. Acad. Sci. U. S. A. 109:5458-5463. http://dx.doi.org/10.1073/pnas .1119912109.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 5458-5463
-
-
Fernandez-Fueyo, E.1
Ruiz-Duenas, F.J.2
Ferreira, P.3
Floudas, D.4
Hibbett, D.S.5
Canessa, P.6
Larrondo, L.F.7
James, T.Y.8
Seelenfreund, D.9
Lobos, S.10
Polanco, R.11
Tello, M.12
Honda, Y.13
Watanabe, T.14
Ryu, J.S.15
Kubicek, C.P.16
Schmoll, M.17
Gaskell, J.18
Hammel, K.E.19
St John, F.J.20
Vanden Wymelenberg, A.21
Sabat, G.22
Splinter BonDurant, S.23
Syed, K.24
Yadav, J.S.25
Doddapaneni, H.26
Subramanian, V.27
Lavin, J.L.28
Oguiza, J.A.29
Perez, G.30
Pisabarro, A.G.31
Ramirez, L.32
Santoyo, F.33
Master, E.34
Coutinho, P.M.35
Henrissat, B.36
Lombard, V.37
Magnuson, J.K.38
Kues, U.39
Hori, C.40
Igarashi, K.41
Samejima, M.42
Held, B.W.43
Barry, K.W.44
LaButti, K.M.45
Lapidus, A.46
Lindquist, E.A.47
Lucas, S.M.48
Riley, R.49
Salamov, A.A.50
Hoffmeister, D.51
Schwenk, D.52
Hadar, Y.53
Yarden, O.54
more..
-
21
-
-
0035872869
-
Isolation and characterization of homokaryotic strains from the ligninolytic basidiomycete Ceriporiopsis subvermispora
-
Tello M, Seelenfreund D, Lobos S, Gaskell J, Cullen D, Vicuna R. 2001. Isolation and characterization of homokaryotic strains from the ligninolytic basidiomycete Ceriporiopsis subvermispora. FEMS Microbiol. Lett. 199:91-96. http://dx.doi.org/10.1111/j.1574-6968.2001.tb10656.x.
-
(2001)
FEMS Microbiol. Lett.
, vol.199
, pp. 91-96
-
-
Tello, M.1
Seelenfreund, D.2
Lobos, S.3
Gaskell, J.4
Cullen, D.5
Vicuna, R.6
-
22
-
-
0001930908
-
Influence of carbon source on cellulase activity of white rot and brown rot fungi
-
Highley TL. 1973. Influence of carbon source on cellulase activity of white rot and brown rot fungi. Wood Fiber 5:50-58.
-
(1973)
Wood Fiber
, vol.5
, pp. 50-58
-
-
Highley, T.L.1
-
24
-
-
0026634164
-
A comparison of the catalytic propoerties of cellobiose:quinone oxidoreductase and cellobiose oxidase from Phanerochaete chrysosporium
-
Samejima M, Eriksson K-E. 1992. A comparison of the catalytic propoerties of cellobiose:quinone oxidoreductase and cellobiose oxidase from Phanerochaete chrysosporium. Eur. J. Biochem. 207:103-107. http://dx.doi .org/10.1111/j.1432-1033.1992.tb17026.x.
-
(1992)
Eur. J. Biochem.
, vol.207
, pp. 103-107
-
-
Samejima, M.1
Eriksson, K.-E.2
-
25
-
-
0020144347
-
Purification and partial characterization of two acidic proteases from the white rot fungus Sporotrichium pulverulentum
-
Eriksson K-E, Pettersson B. 1982. Purification and partial characterization of two acidic proteases from the white rot fungus Sporotrichium pulverulentum. Eur. J. Biochem. 124:635-642.
-
(1982)
Eur. J. Biochem.
, vol.124
, pp. 635-642
-
-
Eriksson, K.-E.1
Pettersson, B.2
-
26
-
-
77950423986
-
Hemicelluloses
-
Scheller HV, Ulvskov P. 2010. Hemicelluloses. Annu. Rev. Plant Biol. 61:263-289. http://dx.doi.org/10.1146/annurev-arplant-042809-112315.
-
(2010)
Annu. Rev. Plant Biol.
, vol.61
, pp. 263-289
-
-
Scheller, H.V.1
Ulvskov, P.2
-
27
-
-
0042338362
-
A statistical model for identifying proteins by tandem mass spectrometry
-
Nesvizhskii AI, Keller A, Kolker E, Aebersold R. 2003. A statistical model for identifying proteins by tandem mass spectrometry. Anal. Chem. 75: 4646-4658. http://dx.doi.org/10.1021/ac0341261.
-
(2003)
Anal. Chem.
, vol.75
, pp. 4646-4658
-
-
Nesvizhskii, A.I.1
Keller, A.2
Kolker, E.3
Aebersold, R.4
-
28
-
-
84862174834
-
The genome portal of the Department of Energy Joint Genome Institute
-
Grigoriev IV, Nordberg H, Shabalov I, Aerts A, Cantor M, Goodstein D, Kuo A, Minovitsky S, Nikitin R, Ohm RA, Otillar R, Poliakov A, Ratnere I, Riley R, Smirnova T, Rokhsar D, Dubchak I. 2012. The genome portal of the Department of Energy Joint Genome Institute. Nucleic Acids Res. 40:D26-D32. http://dx.doi.org/10.1093/nar/gkr947.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Grigoriev, I.V.1
Nordberg, H.2
Shabalov, I.3
Aerts, A.4
Cantor, M.5
Goodstein, D.6
Kuo, A.7
Minovitsky, S.8
Nikitin, R.9
Ohm, R.A.10
Otillar, R.11
Poliakov, A.12
Ratnere, I.13
Riley, R.14
Smirnova, T.15
Rokhsar, D.16
Dubchak, I.17
-
29
-
-
84866500048
-
Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)
-
Aspeborg H, Coutinho PM, Wang Y, Brumer H, Henrissat B. 2012. Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5). BMC Evol. Biol. 12:186. http://dx.doi.org/10 .1186/1471-2148-12-186.
-
(2012)
BMC Evol. Biol.
, vol.12
, pp. 186
-
-
Aspeborg, H.1
Coutinho, P.M.2
Wang, Y.3
Brumer, H.4
Henrissat, B.5
-
30
-
-
26844559000
-
Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein
-
Ishihama Y, Oda Y, Tabata T, Sato T, Nagasu T, Rappsilber J, Mann M. 2005. Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein. Mol. Cell. Proteomics 4:1265-1272. http: //dx.doi.org/10.1074/mcp.M500061-MCP200.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1265-1272
-
-
Ishihama, Y.1
Oda, Y.2
Tabata, T.3
Sato, T.4
Nagasu, T.5
Rappsilber, J.6
Mann, M.7
-
31
-
-
67149111640
-
Transcriptome and secretome analysis of Phanerochaete chrysosporium reveal complex patterns of gene expression
-
Vanden Wymelenberg A, Gaskell J, Mozuch MD, Kersten P, Sabat G, Martinez D, Cullen D. 2009. Transcriptome and secretome analysis of Phanerochaete chrysosporium reveal complex patterns of gene expression. Appl. Environ. Microbiol. 75:4058-4068. http://dx.doi.org/10.1128 /AEM.00314-09.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 4058-4068
-
-
Vanden Wymelenberg, A.1
Gaskell, J.2
Mozuch, M.D.3
Kersten, P.4
Sabat, G.5
Martinez, D.6
Cullen, D.7
-
32
-
-
84896032600
-
-
Illumina. August. Illumina part number 15008136, revision A. Illumina, San Diego, CA.
-
Illumina. August 2011. TruSeq RNA sample preparation guide. Illumina part number 15008136, revision A. Illumina, San Diego, CA.
-
(2011)
TruSeq RNA sample preparation guide
-
-
-
33
-
-
27944500676
-
Purification and properties of a xylanase from Ceriporiopsis subvermispora cultivated on Pinus taeda
-
Milagres AM, Magalhaes PO, Ferraz A. 2005. Purification and properties of a xylanase from Ceriporiopsis subvermispora cultivated on Pinus taeda. FEMS Microbiol. Lett. 253:267-272. http://dx.doi.org/10.1016/j.femsle .2005.09.055.
-
(2005)
FEMS Microbiol. Lett.
, vol.253
, pp. 267-272
-
-
Milagres, A.M.1
Magalhaes, P.O.2
Ferraz, A.3
-
34
-
-
0027973851
-
Preferential degradation of phenolic lignin units by two white rot fungi
-
Camarero S, Galletti GC, Martinez AT. 1994. Preferential degradation of phenolic lignin units by two white rot fungi. Appl. Environ. Microbiol. 60:4509-4516.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 4509-4516
-
-
Camarero, S.1
Galletti, G.C.2
Martinez, A.T.3
-
35
-
-
84857914934
-
Fungal arylalcohol oxidase: a peroxide-producing flavoenzyme involved in lignin degradation
-
Hernández-Ortega A, Ferreira P, Martinez AT. 2012. Fungal arylalcohol oxidase: a peroxide-producing flavoenzyme involved in lignin degradation. Appl. Microbiol. Biotechnol. 93:1395-1410. http://dx.doi .org/10.1007/s00253-011-3836-8.
-
(2012)
Appl. Microbiol. Biotechnol.
, vol.93
, pp. 1395-1410
-
-
Hernández-Ortega, A.1
Ferreira, P.2
Martinez, A.T.3
-
36
-
-
33646123079
-
Computational analysis of the Phanerochaete chrysosporium v2.0 genome database and mass spectrometry identification of peptides in ligninolytic cultures reveals complex mixtures of secreted proteins
-
Vanden Wymelenberg A, Minges P, Sabat G, Martinez D, Aerts A, Salamov A, Grigoriev I, Shapiro H, Putnam N, Belinky P, Dosoretz C, Gaskell J, Kersten P, Cullen D. 2006. Computational analysis of the Phanerochaete chrysosporium v2.0 genome database and mass spectrometry identification of peptides in ligninolytic cultures reveals complex mixtures of secreted proteins. Fungal Genet. Biol. 43:343-356. http://dx.doi .org/10.1016/j.fgb.2006.01.003.
-
(2006)
Fungal Genet. Biol.
, vol.43
, pp. 343-356
-
-
Vanden Wymelenberg, A.1
Minges, P.2
Sabat, G.3
Martinez, D.4
Aerts, A.5
Salamov, A.6
Grigoriev, I.7
Shapiro, H.8
Putnam, N.9
Belinky, P.10
Dosoretz, C.11
Gaskell, J.12
Kersten, P.13
Cullen, D.14
-
37
-
-
20444468865
-
The Phanerochaete chrysosporium secretome: database predictions and initial mass spectrometry peptide identifications in cellulose-grown medium
-
Vanden Wymelenberg A, Sabat G, Martinez D, Rajangam AS, Teeri TT, Gaskell J, Kersten PJ, Cullen D. 2005. The Phanerochaete chrysosporium secretome: database predictions and initial mass spectrometry peptide identifications in cellulose-grown medium. J. Biotechnol. 118:17-34. http: //dx.doi.org/10.1016/j.jbiotec.2005.03.010.
-
(2005)
J. Biotechnol.
, vol.118
, pp. 17-34
-
-
Vanden Wymelenberg, A.1
Sabat, G.2
Martinez, D.3
Rajangam, A.S.4
Teeri, T.T.5
Gaskell, J.6
Kersten, P.J.7
Cullen, D.8
-
38
-
-
0030812766
-
Cellobiose dehydrogenase, an active agent in cellulose depolymerization
-
Mansfield SD, deJong E, Saddler JN. 1997. Cellobiose dehydrogenase, an active agent in cellulose depolymerization. Appl. Environ. Microbiol. 63: 3804-3809.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 3804-3809
-
-
Mansfield, S.D.1
deJong, E.2
Saddler, J.N.3
-
39
-
-
81755166559
-
The putative endoglucanase PcGH61D from Phanerochaete chrysosporium is a metaldependent oxidative enzyme that cleaves cellulose
-
Westereng B, Ishida T, Vaaje-Kolstad G, Wu M, Eijsink VG, Igarashi K, Samejima M, Stahlberg J, Horn SJ, Sandgren M. 2011. The putative endoglucanase PcGH61D from Phanerochaete chrysosporium is a metaldependent oxidative enzyme that cleaves cellulose. PLoS One 6:e27807. http://dx.doi.org/10.1371/journal.pone.0027807.
-
(2011)
PLoS One
, vol.6
-
-
Westereng, B.1
Ishida, T.2
Vaaje-Kolstad, G.3
Wu, M.4
Eijsink, V.G.5
Igarashi, K.6
Samejima, M.7
Stahlberg, J.8
Horn, S.J.9
Sandgren, M.10
-
40
-
-
81755178934
-
Oxidoreductive cellulose depolymerization by the enzymes cellobiose dehydrogenase and glycoside hydrolase 61
-
Langston JA, Shaghasi T, Abbate E, Xu F, Vlasenko E, Sweeney MD. 2011. Oxidoreductive cellulose depolymerization by the enzymes cellobiose dehydrogenase and glycoside hydrolase 61. Appl. Environ. Microbiol. 77:7007-7015. http://dx.doi.org/10.1128/AEM.05815-11.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 7007-7015
-
-
Langston, J.A.1
Shaghasi, T.2
Abbate, E.3
Xu, F.4
Vlasenko, E.5
Sweeney, M.D.6
-
41
-
-
77950948151
-
Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family
-
Harris PV, Welner D, McFarland KC, Re E, Navarro Poulsen JC, Brown K, Salbo R, Ding H, Vlasenko E, Merino S, Xu F, Cherry J, Larsen S, Lo Leggio L. 2010. Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family. Biochemistry 49:3305-3316. http://dx.doi.org/10.1021 /bi100009p.
-
(2010)
Biochemistry
, vol.49
, pp. 3305-3316
-
-
Harris, P.V.1
Welner, D.2
McFarland, K.C.3
Re, E.4
Navarro Poulsen, J.C.5
Brown, K.6
Salbo, R.7
Ding, H.8
Vlasenko, E.9
Merino, S.10
Xu, F.11
Cherry, J.12
Larsen, S.13
Lo Leggio, L.14
-
42
-
-
84856341952
-
Quantitative proteomic analysis of lignocellulolytic enzymes by Phanerochaete chrysosporium on different lignocellulosic biomass
-
Adav SS, Ravindran A, Sze SK. 2012. Quantitative proteomic analysis of lignocellulolytic enzymes by Phanerochaete chrysosporium on different lignocellulosic biomass. J. Proteomics 75:1493-1504. http://dx.doi.org/10 .1016/j.jprot.2011.11.020.
-
(2012)
J. Proteomics
, vol.75
, pp. 1493-1504
-
-
Adav, S.S.1
Ravindran, A.2
Sze, S.K.3
-
43
-
-
79959976450
-
Effects of xylan and starch on secretome of the basidiomycete Phanerochaete chrysosporium grown on cellulose
-
Hori C, Igarashi K, Katayama A, Samejima M. 2011. Effects of xylan and starch on secretome of the basidiomycete Phanerochaete chrysosporium grown on cellulose. FEMS Microbiol. Lett. 321:14-23. http://dx.doi.org /10.1111/j.1574-6968.2011.02307.x.
-
(2011)
FEMS Microbiol. Lett.
, vol.321
, pp. 14-23
-
-
Hori, C.1
Igarashi, K.2
Katayama, A.3
Samejima, M.4
-
44
-
-
34948842973
-
Expression analysis of extracellular proteins from Phanerochaete chrysosporium grown on different liquid and solid substrates
-
Sato S, Liu F, Koc H, Tien M. 2007. Expression analysis of extracellular proteins from Phanerochaete chrysosporium grown on different liquid and solid substrates. Microbiology 153:3023-3033. http://dx.doi.org/10.1099 /mic.0.2006/000513-0.
-
(2007)
Microbiology
, vol.153
, pp. 3023-3033
-
-
Sato, S.1
Liu, F.2
Koc, H.3
Tien, M.4
-
45
-
-
84892379836
-
Genome-wide analysis of polysaccharide degrading enzymes in eleven white-and brown-rot polyporales provides insight into mechanisms of wood decay
-
Hori C, Gaskell J, Igarashi K, Samejima M, Hibbett D, Henrissat B, Cullen D. 2013. Genome-wide analysis of polysaccharide degrading enzymes in eleven white-and brown-rot polyporales provides insight into mechanisms of wood decay. Mycologia 105:1412-1427. http://dx.doi.org /10.3852/13-072.
-
(2013)
Mycologia
, vol.105
, pp. 1412-1427
-
-
Hori, C.1
Gaskell, J.2
Igarashi, K.3
Samejima, M.4
Hibbett, D.5
Henrissat, B.6
Cullen, D.7
-
46
-
-
0025068925
-
Effect of environmental conditions on extracellular protease activity in lignolytic cultures of Phanerochaete chrysosporium
-
Dosoretz CD, Chen H-C, Grethlein HE. 1990. Effect of environmental conditions on extracellular protease activity in lignolytic cultures of Phanerochaete chrysosporium. Appl. Environ. Microbiol. 56:395-400.
-
(1990)
Appl. Environ. Microbiol.
, vol.56
, pp. 395-400
-
-
Dosoretz, C.D.1
Chen, H.-C.2
Grethlein, H.E.3
-
47
-
-
34250512499
-
Recent progress in the chemistry of wood hemicelluloses
-
Timell T. 1967. Recent progress in the chemistry of wood hemicelluloses. Wood Sci. Technol. 1:45-70. http://dx.doi.org/10.1007/BF00592255.
-
(1967)
Wood Sci. Technol.
, vol.1
, pp. 45-70
-
-
Timell, T.1
-
48
-
-
33747826056
-
The wood cell wall at the ultrastructural scale-formation and topochemical organization
-
Ruel K, Chevalier-Billosta V, Guillemin F, Berrio-Sierra J, Joseleau JP. 2006. The wood cell wall at the ultrastructural scale-formation and topochemical organization. Maderas Cien.Tecnol. 8:107-116.
-
(2006)
Maderas Cien.Tecnol.
, vol.8
, pp. 107-116
-
-
Ruel, K.1
Chevalier-Billosta, V.2
Guillemin, F.3
Berrio-Sierra, J.4
Joseleau, J.P.5
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