Response of aerobic rice to Piriformospora indica

Indian Journal of Experimental Biology

Volumn 52, Issue 3, 2014, Pages 237-251

  Das, Joy ^a   Ramesh, K V ^b   Maithri, U ^b   Mutangana, D ^b   Suresh, C K ^a  

^a UNIVERSITY OF AGRICULTURAL SCIENCES   (India)

^b JAIN UNIVERSITY   (India)

Author keywords

3D model; Dock; Glomus fasciculatum; P uptake; Phosphate transporter; Piriformospora indica

Indexed keywords

PHOSPHATE; PHOSPHATE TRANSPORTER; WATER;

AEROBIC METABOLISM; ARTICLE; COMPUTER SIMULATION; GENETICS; METABOLISM; MICROBIOLOGY; MYCORRHIZA; PARASITOLOGY; PLANT; PLANT ROOT; RHIZOSPHERE; RICE;

AEROBIOSIS; COMPUTER SIMULATION; MYCORRHIZAE; ORYZA SATIVA; PHOSPHATE TRANSPORT PROTEINS; PHOSPHATES; PLANT ROOTS; PLANT SHOOTS; RHIZOSPHERE; SOIL MICROBIOLOGY; WATER;

EID: 84895889162     PISSN: 00195189     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (77)

1. Singh A, Sharma J, Rexer K H & Varma A, Biotechnological importance of Piriformospora indica-A novel symbiotic mycorrhizal-like fungus: an overview Curr Sci, 79 (2000) 101.
2. Dolatabadi H K, Goltapeh E M, Jaimand K, Rohani N & Varma A, Effects of Piriformospora indica and Sebacina vermifera on growth and yield of essential oil in fennel (Foeniculum vulgare) under greenhouse conditions, J Basic Microbio, 51 (2011) 33.
3. Satheesan J, Narayanan A K & Sakunthala M, Induction of root colonization by Piriformospora indica leads to enhanced asiaticoside production in Centella asiatica, Mycorrhiza, 22 (2012) 195.
4. Sun C, Johnson J M, Cai D, Sherameti I, Oelmüller R & Lou B, Piriformospora indica confers drought tolerance in Chinese cabbage leaves by stimulating antioxidant enzymes, the expression of drought-related genes and the plastid localized CAS protein, J Plant Physiol, 167 (2010) 1009.
5. Kumar M, Sridevi K & Tamilarasan R, Assessment of cadmium and its impact on the uptake efficiency of Phosphate fertilizers by Amaranthus tricolour, J Mater Environ Sci, 3 (2012) 947.
6. Yadav V, Kumar M, Deep D K, Kumar H, Sharma R, Tripathi T, Tuteja N, Saxena A K & Johri A K, A phosphate transporter from the root endophytic fungus Piriformospora indica plays a role in the phosphate transport to the host plant, J Biol Chem, 285 (2010) 26532.
7. Rhodes L H & Gardemann J W, Influence of phosphorus nutrition on sulphur uptake by vesicular arbuscular, Soil Biol Biochem, 10 (1978) 361.
8. Cooper K M & Tinker P B, Translocation and transfer of nutrients in vesicular-arbuscular mycorrhiza III. Uptake and translocation of phosphorus, zinc and sulphur, New Phytol, 81 (1978) 43.
9. Tinker P B, The role of microorganisms in mediating and facilitating the uptake of plant nutrients from soil. in Biológical processes and soil fertility, edited by Tinsley J & Darbyshire J R (Kluwer Academic Publishers, The Mague) 1984, 77.
10. Schonbeck F & Dehne H, Damage to mycorrhizal and non mycorrhizal cotton seedlings by Thielaviopsis basicola, Plant Disease Rep, 61 (1977) 266.
11. Allen M F, Moore T S & Christenson M, Phytohormone changes in Bouteloua gracilis infected by vesicular arbuscular mycorrhizae I: Cytokinin increases in the host plant, Can J Bot, 58 (1980) 371.
12. thNorth. American Conference on Mycorrhiza, edited by Molina, R. (Corvallis, USA) 1985, 417.
13. Sreenivasa M N & Bagyaraj D J, Suitable level of Zn, Cu, Mn for mass production of VAM fungus Glomus fasciculatum, Proc Indian Acad Sci, 98 (1988) 581.
14. Waller F, Mukherjee K, Deshmukh S D, Achatz B, Sharma M, Schäfer P & Kogel K-H, Systemic and local modulation of plant responses by Piriformospora indica and related Sebacinales species, J Plant Physiol, 165 (2008) 60.
15. Zuccaro A, Basiewicz M, Zurawska M, Biedenkopf D & Kogel K H, Karyotype analysis, genome organization, and stable genetic transformation of the root colonizing fungus Piriformospora indica, Fungal Genet Biol, 46 (2009) 543.
16. Varma A, Verma S, Sudha N, Buetehorn B & Franken P, Piriformospora indica, a cultivable plant growth promoting root endophyte, Appl Environ Microbiol, 65 (1999) 2741.
17. Kumar A, Fernandez-Capetillo O & Carrera A C, Nuclear phosphoinositide 3-kinase β controls double-strand break DNA repair, Proc Natl Acad Sci USA, 107 (2010) 7491.
18. Harrison M J & van-Buuren M L, A Phosphate transporter from the mycorrhizal fungus Glomus versiforme, Nature, 378 (1995) 626.
19. Maldonado-Mendoza I E, Dewbre G R & Harrison M J, A phosphate transporter gene from the extra-radical mycelium of an arbuscular mycorrhizal fungus Glomus intraradices is regulated in response to phosphate in the environment, Mol Plant Microb Interact, 14 (2001)1140.
20. Benedetto A, Magurno F, Bonfante P & Lanfranco L, Expression profiles of a phosphate transporter gene (GmosPT) from the endomycorrhizal fungus Glomus mosseae, Mycorrhiza, 15 (2005) 620.
21. Prajapati K, Yami K D & Singh, Plant growth promotional effect of Azotobacter chroococcum, Piriformospora indica and Vermicompost on Rice Plant, Nepal J Sci Technol, 9 (2008) 85.
22. Thompson J D, Higgins D G & Gibson T J, CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic acids res, 22 (1994) 4673.
23. Felsenstein J, Inferring Phylogenies, Bioinformatics, 19 (2003) 2500.
24. Zhang Y, I-TASSER server for protein structure prediction, BMC Bioinformatics 9 (2008) 40.
25. Guex N & Peitsch M C, Swiss-model and the Swiss-PdbViewer: An environment for comparative protein modelling, Electrophoresis, 18 (1997) 2714.
26. Fiser A & Sali A, ModLoop: automated modeling of loops in protein structures, Bioinformatics, 19 (2003) 2500.
27. Colovos C & Yeates T O, Verification of protein structures: patterns of non-bonded atomic interactions, Protein Sci, 2 (1993) 1511.
28. Laskowski R A, Macarthur M W, Moss D S & Thornton J M, PROCHECK: a program to check the stereochemical quality of protein structures, J Appl Cryst, 26 (1993) 283.
29. Holm L & Rosenström P, Dali server: conservation mapping in 3D; Nucleic Acids Res, 38 (2010) W545.
30. Frisch M J, Trucks G W, Schlegel H B, Scuseria G E et al. Gaussian 09 (2009), Revision B.1, Gaussian, Inc., Wallingford CT.
31. Ritchie D W & Venkatraman V, Ultra-Fast FFT Protein Docking On Graphics Processors, Bioinformatics, 26 (2010) 2398.
32. Kaefer E, Meiotic and mitotic recombination in Aspergillus and its chromosomal aberrations, Adv Genet, 19 (1977) 33.
33. Owusu-Bennoah E & Mossae B, Plant growth responses to vesicular-arbuscular mycorrhiza. XI. Field inoculation responses in barley, Lucerne and onion, New Phytol, 83 (1979) 133.
34. Pandey D K & Banik R M, The influence of dual inoculation with Glomus mossae and Azotobacter on growth and barbaloin content of Aloe vera, Am-Eurasian J Sustain, 3 (2009)703
35. Achatz B, Von Rüden S, andrade D, Neumann E, Ponskühnemann J, Franken P & Waller F, Root colonization by Piriformospora indica enhances grain yield in barley under diverse nutrient regimes by accelerating early plant development. Plant Soil, 333 (2010) 59.
36. Giovannetti M & Mosse B, An evaluation of techniques for measuring vesicular-arbuscular infection in roots, New Phytol, 84 (1980) 48.
37. Rai M, Acharya D, Singh A & Varma A, Positive growth responses of the medicinal plants Spilanthes calva and Withania somnifera to inoculation by Piriformospora indica in a field trial, Mycorrhiza, 11 (2001) 123.
38. Phillips J M & Hayman D S, Improved procedures for clearing and staining parasites and vesicular-arbuscular mycorrhizal fungi for rapid assessment of infection. Trans Br Mycol Soc, 55 (1970) 158.
39. thed. Association of Official Analytical Chemistry, (Washington D. C) 1980, 376.
40. Jackson, M L, Soil Chemical Analysis, (Prentice-Hall of India Private Limited, New Delhi, India) 1973, 82.
41. Hiscox J D & Israedstam G F, A method for extraction of chlorophyll from leaf tissue without maceration, Can J Bot, 57 (1979) 1332.
42. Arnon D I. Copper enzymes in isolated chloroplasts polyphenolixdase in Beta vulgaris, Plant Physiol, 24 (1949) 1.
43. Dubios M, Gills K A, Hamilton J K, Rebers P A & Smith F, Colorimetric for the determination of the sugars and related substances, Anal Chem, 28 (1996) 350.
44. Eivasi F & Tabatabai M, Phosphatases in soils, Soil Biol Biochem, 9 (1977) 167.
45. Zuccaro A, Lahrmann U, Guldener U, Langen G, Pfiffi S, Biedenkopf D, Wong P, Samans B, Grimm C, Basiewicz M, Murat C, Martin F & Kogel K-H, Endophytic life strategies decoded by genome and transcriptome analyses of the mutualistic root symbiont Piriformospora indica, PLoS Pathog, 7 (2011) e1002290.
46. Abbott L K & Robson A D, The role of vesicular-arbuscular mycorrhizal fungi in agriculture and the selection of fungi for inoculation, Aust J Agric Res 33 (1982) 389.
47. Archana S, Jyotika S, Karl-Heinz R & Ajit V, Plant productivity determinants beyond minerals, water and light: Piriformospora indica-A revolutionary plant growth promoting fungus, Curr Sc, (2002) 1548.
48. Bevege D I, Bowen G D & Skinner M F, Comparative carbohydrate physiology of ecto-and endo-mycorrhizas, in Endomycorrhizas, edited by Sanders F E, Mosse B and Tinker P B (London: Academic Press) 1975, 149.
49. Borah A & Phukan P N, Effect of Glomus fasciculatum on nutritional and biochemical changes in brinjal infested by Meloidogyne incognita, Indian J Nematol, 36 (2006)189
50. Brown M E, Seed and root bacterization, Ann Rev Phytopathol, 53 (1974)181.
51. Caers M, Rudelsheim P, Onckelen H V & Horemans S, Effect of heat stress on photosynthetic activity and chloroplast ultrastructure in correlation with endogenous cytokinin concentration in maize seedlings, Plant Cell Physiol, 26 (1985) 47.
52. Cairney J W G, Ashford A E & Allaway W G, Distribution of photosynthetically fixed carbon within root systems of Eucalyptus pilularis plants ectomycorrhizal with Pisolithus tinctorius, New Phytol,112 (1989) 495.
53. Deshmukh S, Huckelhoven R, Schafer P, Imani J, Sharma M, Weiss M, Waller F & Kogel K H, The root endophytic fungus Piriformospora indica requires host cell death for proliferation during mutualistic symbiosis with barley, Proc Natl Acad Sci, 103 (2006) 18450.
54. Fitze D, Wiepning A, Kaldorf M & Ludwig-Muller, Auxins in the development of an arbuscular mycorrhizal symbiosis in maize, J Plant Physiol, 162 (2005) 1210.
55. Fries L L M, Pacovsky R S, Safir G R & Kaminski J, Phosphorus effect on phosphatase activity in endomycorrhizal maize, Physiol Plantarum, 103 (1998) 162.
56. Guether M, Neuhäuser B, Balestrini R, Dynowski M, Ludewig U & Bonfante P A Mycorrhizal-Specific Ammonium Transporter from Lotus japonicus Acquires Nitrogen Released by Arbuscular Mycorrhizal Fungi, Plant Physil, 150 (2009) 73.
57. Hong Y, Devaiah S P, Bahn S C, Thamasandra B N, Li M, Welti R & Wang X, Phospholipase Dβ and phosphatidic acid enhance Arabidopsis nitrogen signaling and growth, Plant, 58 (2009) 376.
58. Huang Y, Lemieux M J, Song J, Auer M & Wang D-N, Structure and mechanism of the glycerol-3-phosphate transporter from Escherichia coli, Science, 301 (2003) 616.
59. Krishna K R & Bagyaraj D J, Growth and nutrient uptake of peanut inoculated with mycorrhizal fungus Glomus fasciculatum compared with uninoculated ones, Plant Soil, 17 (1984) 405.
60. Kumar M, Yadav V, Tuteja N J & ohri A K, Antioxidant enzyme activities in maize plants colonized with Piriformospora indica, Microbiol, 155 (2009) 780.
61. Kumar V, Sahai V & Bisaria V S, High-density spore production of Piriformospora indica, a plant growthpromoting endophyte by optimization of nutritional and cultural parameters, Bioresour Technol, 102 (2011) 3169.
62. Lee K W & Briggs J M, Molecular modeling study of the editing active site of Escherichia coli leucyl-tRNA synthetase: two amino acid binding sites in the editing domain, Proteins, 54 (2004) 693.
63. Meixner C, Ludwig-Muller J, Miersch O, Gresshoff P, Staehelin C & Vierheilig H, Lack of mycorrhizal autoregulation and phytohormonal changes in the supernodulating soybean mutant nts1007, Planta, 222 (2005) 709.
64. Newsham K K, Fitter A H &Watterson A R, Arbuscular mycorrhiza protect an annual grass from root pathogenic fungi in the field, J Ecol, 83 (1995) 991.
65. Nickell L G, Plant Growth Regulators-Agricultural Uses, (Springer-Verlag Berlin, Heidelberg, New York) 1982, 59.
66. Panneerselvam M & Thamizhiniyan P, Response to AM fungi and Azospirillum in growth of Vigna radiata L. Hub, Rec Res Sci Technol, 3 (2011) 145.
67. Parthier B, The role of phytohormones (cytokinins) in chloroplast development, Biochem. Physiol Pflanzen, 174 (1979) 173.
68. Qiang X, Zechmann B, Reitz M U, Kogel K H & Schäfer P, The Mutualistic Fungus Piriformospora indica Colonizes Arabidopsis Roots by Inducing an Endoplasmic Reticulum Stress-Triggered Caspase-Dependent Cell Death, Plant Cell, 24 (2012) 794.
69. Rajasekaran S, Nagarajan S M, Arumugam K, Sravanamuthu R & Balamurugan S, Effect of dual inoculation (AM fungi and Rhizobium) on Chlorophyll content of Arachis hypogaea L. CV. TMV-2, Plant Archives, 6 (2006) 671.
70. Rhodes L H & Gerdeman J W, Translocation of calcium and phosphate by external hyphae of VAM, Soil Science, 126 (1978) 125.
71. Ruiz-Sánchez M, Aroca R, Muñoz Y, Polón R & Ruiz-Lozano J M, The arbuscular mycorrhizal symbiosis enhances the photosynthetic efficiency and the antioxidative response of rice plants subjected to drought stress, J Plant Physiol, 167 (2010) 862.
72. Schäfer A I, Rossiter H M A, Owusu P A, Richards B S & Awuah E, Physico-Chemical water quality in Ghana: prospects for water supply technology implementation, Desalination, 248 (2009) 193.
73. Sherameti I, Shahollari B, Venus Y, Altschmied L, Varma A & Oelmüller R, The endophytic fungus Piriformospora indica stimulates the expression of nitrate reductase and the starch-degrading enzyme glucan-water dikinase in tobacco and Arabidopsis roots through a homeodomain transcription factor that binds to a conserved motif in their promoters. J Biol Chem, 280 (2005) 26241.
74. Sirrenberg A, Göbel C, Grond S, Czempinski N, Ratzinger A, Karlovsky P, Santos P, Feussner I & Pawlowski K, Piriformospora indica affects plant growth by auxin production, Physiol Plant, 131 (2007) 581.
75. Tisserant B, Gianinazzi-Pearson V, Gian-Inazzi S & Gollotte A, Planta histochemical staining of fungal alkaline phosphatase activity for analysis of efficient arbuscular mycorrhizal infections, Mycol Res, 97 (1993) 245.
76. Vallino M, Greppi D, Novero M, Bonfante P & Lupotto E, Rice root colonisation by mycorrhizal and endophytic fungi in aerobic soil, Ann Appl Biol,154 (2009) 195.
77. Varma A, Rai M K & Sahay N S, Microbial biotechnology: New paradigms and role in sustainable agriculture, In Microbial biotechnology for sustainable development and productivity edited by Rajak R C (India: Scientific Publishers) 2000, 22.