-
1
-
-
0035093350
-
Energetics of overall metabolic reactions of thermophilic and hyperthermophilic Archaea and Bacteria
-
DOI 10.1016/S0168-6445(00)00062-0, PII S0168644500000620
-
Amend JP, Shock EL (2001) Energetics of overall metabolic reactions of thermophilic and hyperthermophilic archaea and bacteria. FEMS Microbiol Rev 25:175-243 (Pubitemid 32203705)
-
(2001)
FEMS Microbiology Reviews
, vol.25
, Issue.2
, pp. 175-243
-
-
Amend, J.P.1
Shock, E.L.2
-
2
-
-
24644515752
-
Tuning genetic control through promoter engineering
-
DOI 10.1073/pnas.0504604102
-
Alper H, Fischer C, Nevoigt E, Stephanopoulos G (2005) Tuning genetic control through promoter engineering. Proc Natl Acad Sci USA 102:12678-12683 (Pubitemid 41279425)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.36
, pp. 12678-12683
-
-
Alper, H.1
Fischer, C.2
Nevoigt, E.3
Stephanopoulos, G.4
-
3
-
-
33845593742
-
Thermococcus onnurineus sp. Nov., a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area at the PACMANUS field
-
Bae SS, Kim YJ, Yang SH, Lim JK, Jeon JH, Lee HS, Kang SG, Kim SJ, Lee JH (2006) Thermococcus onnurineus sp. nov., a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area at the PACMANUS field. J Microbial Biotechnol 16:1826-1831 (Pubitemid 44932362)
-
(2006)
Journal of Microbiology and Biotechnology
, vol.16
, Issue.11
, pp. 1826-1831
-
-
Bae, S.S.1
Kim, Y.J.2
Yang, S.H.3
Lim, J.K.4
Jeon, J.H.5
Lee, H.S.6
Kang, S.G.7
Kim, S.-J.8
Lee, J.-H.9
-
4
-
-
83055172864
-
2 production from CO, formate or starch using the hyperthermophilic archaeon, Thermococcus onnurineus
-
1:CAS:528:DC%2BC3MXhsF2rt7bE 21898132 10.1007/s10529-011-0732-3
-
2 production from CO, formate or starch using the hyperthermophilic archaeon, Thermococcus onnurineus. Biotechnol Lett 34:75-79
-
(2012)
Biotechnol Lett
, vol.34
, pp. 75-79
-
-
Bae, S.S.1
Kim, T.W.2
Lee, H.S.3
Kwon, K.K.4
Kim, Y.J.5
Kim, M.S.6
Lee, J.H.7
Kang, S.G.8
-
5
-
-
0017030513
-
New approach to the cultivation of methanogenic bacteria: 2 mercaptoethanesulfonic acid (HS CoM) dependent growth of Methanobacterium ruminantium in a pressurized atmosphere
-
Balch WE, Wolfe RS (1976) New approach to the cultivation of methanogenic bacteria: 2-mercaptoethanesulfonic acid (HS-CoM)-dependent growth of Methanobacterium ruminantium in a pressurized atmosphere. Appl Environ Microbiol 32:781-791 (Pubitemid 8008043)
-
(1976)
Applied and Environmental Microbiology
, vol.32
, Issue.6
, pp. 781-791
-
-
Balch, W.E.1
Wolfe, R.S.2
-
6
-
-
84875078664
-
A comparative analysis of the properties of regulated promoter systems commonly used for recombinant gene expression in Escherichia coli
-
1:CAS:528:DC%2BC3sXotFCnurc%3D 3621392 23506076 10.1186/1475-2859-12-26
-
Balzer S, Kucharova V, Megerle J, Lale R, Brautaset T, Valla S (2013) A comparative analysis of the properties of regulated promoter systems commonly used for recombinant gene expression in Escherichia coli. Microb Cell Fact 12:26
-
(2013)
Microb Cell Fact
, vol.12
, pp. 26
-
-
Balzer, S.1
Kucharova, V.2
Megerle, J.3
Lale, R.4
Brautaset, T.5
Valla, S.6
-
7
-
-
0031817133
-
Characterization and nitrogen-source regulation at the transcriptional level of the gdhA gene of Aspergillus awamori encoding an NADP-dependent glutamate dehydrogenase
-
DOI 10.1007/s002940050365
-
Cardoza RE, Moralejo FJ, Gutiérrez S, Casqueiro J, Fierro F, Martín JF (1998) Characterization and nitrogen-source regulation at the transcriptional level of the gdhA gene of Aspergillus awamori encoding an NADP-dependent glutamate dehydrogenase. Curr Genet 34:50-59 (Pubitemid 28391245)
-
(1998)
Current Genetics
, vol.34
, Issue.1
, pp. 50-59
-
-
Cardoza, R.-E.1
Moralejo, F.-J.2
Gutierrez, S.3
Casqueiro, J.4
Fierro, F.5
Martin, J.F.6
-
8
-
-
0028179130
-
Use of β-lactamase as a secreted reporter of promoter function in yeast
-
DOI 10.1002/yea.320100409
-
Cartwright CP, Li Y, Zhut YS (1994) Use of β-lactamase as a secreted reporter of promoter function in yeast. Yeast 10:497-508 (Pubitemid 24150637)
-
(1994)
Yeast
, vol.10
, Issue.4
, pp. 497-508
-
-
Cartwright, C.P.1
Li, Y.2
Zhu, Y.-S.3
Kang, Y.-S.4
Tipper, D.J.5
-
9
-
-
84863021838
-
Engineering hyperthermophilic archaeon Pyrococcus furiosus to overproduce its cytoplasmic [NiFe]-Hydrogenase
-
22157005 10.1074/jbc.M111.290916
-
Chandrayan SK, McTernan PM, Hopkins RC, Sun JS, Jenney FE, Adams MWW (2011) Engineering hyperthermophilic archaeon Pyrococcus furiosus to overproduce its cytoplasmic [NiFe]-Hydrogenase. J Biol Chem 287:3257-3264
-
(2011)
J Biol Chem
, vol.287
, pp. 3257-3264
-
-
Chandrayan, S.K.1
McTernan, P.M.2
Hopkins, R.C.3
Sun, J.S.4
Jenney, F.E.5
Adams, M.W.W.6
-
10
-
-
0032850367
-
The NADP-dependent glutamate dehydrogenase gene from Penicillium chrysogenum and the construction of expression vectors for filamentous fungi
-
DOI 10.1007/s002530051509
-
Díez B, Mellado E, Rodríguez M, Bernasconi E, Barredo JL (1999) The NADP-dependent glutamate dehydrogenase gene from Penicillium chrysogenum and the construction of expression vectors for filamentous fungi. Appl Microbiol Biotechnol 52:196-207 (Pubitemid 29424515)
-
(1999)
Applied Microbiology and Biotechnology
, vol.52
, Issue.2
, pp. 196-207
-
-
Diez, B.1
Mellado, E.2
Rodriguez, M.3
Bernasconi, E.4
Barredo, J.L.5
-
11
-
-
0028103746
-
Translational initiation on structured messengers. Another role for the Shine-Dalgarno interaction
-
8289239 10.1016/S0022-2836(05)80024-5
-
de Smit MH, van Duin J (1994) Translational initiation on structured messengers. Another role for the Shine-Dalgarno interaction. J Mol Biol 235:173-184
-
(1994)
J Mol Biol
, vol.235
, pp. 173-184
-
-
De Smit, M.H.1
Van Duin, J.2
-
12
-
-
31444433490
-
Synthetic promoter libraries - Tuning of gene expression
-
DOI 10.1016/j.tibtech.2005.12.003, PII S0167779905003264
-
Hammer K, Mijakovic I, Jensen PR (2006) Synthetic promoter libraries-tuning of gene expression. Trends Biotechnol 24:53-55 (Pubitemid 43151974)
-
(2006)
Trends in Biotechnology
, vol.24
, Issue.2
, pp. 53-55
-
-
Hammer, K.1
Mijakovic, I.2
Jensen, P.R.3
-
13
-
-
0035000622
-
Diversity among three novel groups of hyperthermophilic deep-sea Thermococcus species from three sites in the northeastern Pacific Ocean
-
DOI 10.1016/S0168-6496(01)00118-0, PII S0168649601001180
-
Holden JF, Takai K, Summit M, Bolton S, Zyskowski J, Baross JA (2001) Diversity among three novel groups of hyperthermophilic deep-sea Thermococcus species from three sites in the northeastern Pacific Ocean. FEMS Microbiol Ecol 36:51-60 (Pubitemid 32476858)
-
(2001)
FEMS Microbiology Ecology
, vol.36
, Issue.1
, pp. 51-60
-
-
Holden, J.F.1
Takai, K.2
Summit, M.3
Bolton, S.4
Zyskowski, J.5
Baross, J.A.6
-
14
-
-
84866171028
-
One-step sequence- and ligation-independent cloning as a rapid and versatile cloning method for functional genomics studies
-
1:CAS:528:DC%2BC38XhtFWjsLvJ 3416421 22610439 10.1128/AEM.00844-12
-
Jeong JY, Yim HS, Ryu JY, Lee SH, Lee JH, Seen DS, Kang SG (2012) One-step sequence- and ligation-independent cloning as a rapid and versatile cloning method for functional genomics studies. Appl Environ Microbiol 78:5440-5443
-
(2012)
Appl Environ Microbiol
, vol.78
, pp. 5440-5443
-
-
Jeong, J.Y.1
Yim, H.S.2
Ryu, J.Y.3
Lee, S.H.4
Lee, J.H.5
Seen, D.S.6
Kang, S.G.7
-
15
-
-
0028091277
-
Formation of L-alanine as a reduced end product in carbohydrate fermentation by the hyperthermophilic archaeon Pyrococcus furiosus
-
DOI 10.1007/s002030050038
-
L-alanine as a reduced end-product in carbohydrate fermentation by the hyperthermophilic archaeon Pyrococcus furiosus. Arch Microbiol 161:168-175 (Pubitemid 24047654)
-
(1994)
Archives of Microbiology
, vol.161
, Issue.2
, pp. 168-175
-
-
Kengen, S.W.M.1
Stams, A.J.M.2
-
16
-
-
84874790680
-
2 production by a genetically engineered Thermococcus onnurineus NA1
-
1:CAS:528:DC%2BC3sXkvVGrtbo%3D 3592222 23335765 10.1128/AEM.03298-12
-
2 production by a genetically engineered Thermococcus onnurineus NA1. Appl Environ Microbiol 79:2048-2053
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 2048-2053
-
-
Kim, M.S.1
Bae, S.S.2
Kim, Y.J.3
Kim, T.W.4
Lim, J.K.5
Lee, S.H.6
Choi, A.R.7
Jeon, J.H.8
Lee, J.H.9
Lee, H.S.10
Kang, S.G.11
-
17
-
-
77956936499
-
2 production
-
1:CAS:528:DC%2BC3cXhtFOht7bF 20844539 10.1038/nature09375
-
2 production. Nature 467:352-355
-
(2010)
Nature
, vol.467
, pp. 352-355
-
-
Kim, Y.J.1
Lee, H.S.2
Kim, E.S.3
Bae, S.S.4
Lim, J.K.5
Matsumi, R.6
Lebedinsky, A.V.7
Sokolova, T.G.8
Kozhevnikova, D.A.9
Cha, S.S.10
Kim, S.J.11
Kwon, K.K.12
Imanaka, T.13
Atomi, H.14
Bonch-Osmolovskaya, E.A.15
Lee, J.H.16
Kang, S.G.17
-
18
-
-
0001921538
-
Analysis of S-layer proteins and genes
-
U.B. Sleytr Messner D. Pum M. Sára (eds) R.G. Landes Comp. and Academic Austin
-
Kuen B, Lubitz W (1996) Analysis of S-layer proteins and genes. In: Sleytr UB, Messner P, Pum D, Sára M (eds) Crystalline bacterial cell surface proteins. R.G. Landes Comp. and Academic, Austin, pp 77-102
-
(1996)
Crystalline Bacterial Cell Surface Proteins
, pp. 77-102
-
-
Kuen, B.1
Lubitz, W.2
-
19
-
-
55549124188
-
The complete genome sequence of Thermococcus onnurineus NA1 reveals a mixed heterotrophic and carboxydotrophic metabolism
-
1:CAS:528:DC%2BD1cXhtlKiu7zM 2576655 18790866 10.1128/JB.00746-08
-
Lee HS, Kang SG, Bae SS, Lim JK, Cho Y, Kim YJ, Jeon JH, Cha SS, Kwon KK, Kim HT, Park CJ, Lee HW, Kim SI, Chun J, Colwell RR, Kim SJ, Lee JH (2008) The complete genome sequence of Thermococcus onnurineus NA1 reveals a mixed heterotrophic and carboxydotrophic metabolism. J Bacteriol 190:7491-7499
-
(2008)
J Bacteriol
, vol.190
, pp. 7491-7499
-
-
Lee, H.S.1
Kang, S.G.2
Bae, S.S.3
Lim, J.K.4
Cho, Y.5
Kim, Y.J.6
Jeon, J.H.7
Cha, S.S.8
Kwon, K.K.9
Kim, H.T.10
Park, C.J.11
Lee, H.W.12
Kim, S.I.13
Chun, J.14
Colwell, R.R.15
Kim, S.J.16
Lee, J.H.17
-
20
-
-
84862264292
-
Achieving efficient protein expression in Trichoderma reesei by using strong constitutive promoters
-
10.1186/1475-2859-11-84
-
Li J, Wang J, Wang S, Xing M, Yu S, Liu G (2012) Achieving efficient protein expression in Trichoderma reesei by using strong constitutive promoters. Microbial Cell Fact 11:84
-
(2012)
Microbial Cell Fact
, vol.11
, pp. 84
-
-
Li, J.1
Wang, J.2
Wang, S.3
Xing, M.4
Yu, S.5
Liu, G.6
-
21
-
-
77956803428
-
Identification of a novel class of membrane-bound [NiFe]-hydrogenases in Thermococcus onnurineus NA1 by in silico analysis
-
1:CAS:528:DC%2BC3cXhtlartrvK 2937479 20656864 10.1128/AEM.00123-10
-
Lim JK, Kang SG, Lebedinsky AV, Lee JH, Lee HS (2010) Identification of a novel class of membrane-bound [NiFe]-hydrogenases in Thermococcus onnurineus NA1 by in silico analysis. Appl Environ Microbiol 76:6286-6289
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 6286-6289
-
-
Lim, J.K.1
Kang, S.G.2
Lebedinsky, A.V.3
Lee, J.H.4
Lee, H.S.5
-
22
-
-
34147158720
-
Disruption of a sugar transporter gene cluster in a hyperthermophilic archaeon using a host-marker system based on antibiotic resistance
-
DOI 10.1128/JB.01692-06
-
Matsumi R, Manabe K, Fukui T, Atomi H, Imanaka T (2007) Disruption of a sugar transporter gene cluster in a hyperthermophilic archaeon using a host-marker system based on antibiotic resistance. J Bacteriol 189:2683-2691 (Pubitemid 46556050)
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.7
, pp. 2683-2691
-
-
Matsumi, R.1
Manabe, K.2
Fukui, T.3
Atomi, H.4
Imanaka, T.5
-
23
-
-
70249146096
-
Short-chain" α-1,4-glucan phosphorylase having a truncated N-terminal domain: Functional expression and characterization of the enzyme from Sulfolobus solfataricus
-
1:CAS:528:DC%2BD1MXhtFGqsb3P 19682609 10.1016/j.bbapap.2009.08.006
-
Mueller M, Takemasa R, Schwarz A, Atomi H, Nidetzky B (2009) "Short-chain" α-1,4-glucan phosphorylase having a truncated N-terminal domain: functional expression and characterization of the enzyme from Sulfolobus solfataricus. Biochim Biophys Acta 1794:1709-1714
-
(2009)
Biochim Biophys Acta
, vol.1794
, pp. 1709-1714
-
-
Mueller, M.1
Takemasa, R.2
Schwarz, A.3
Atomi, H.4
Nidetzky, B.5
-
25
-
-
84884818081
-
Construction, characterization and application of molecular tools for metabolic engineering of Synechocystis sp
-
1:CAS:528:DC%2BC3sXhsFCjur7L 23743956 10.1007/s10529-013-1252-0
-
Qi F, Yao L, Tan X, Lu X (2013) Construction, characterization and application of molecular tools for metabolic engineering of Synechocystis sp. Biotechnol Lett 35:1655-1661
-
(2013)
Biotechnol Lett
, vol.35
, pp. 1655-1661
-
-
Qi, F.1
Yao, L.2
Tan, X.3
Lu, X.4
-
27
-
-
33645546618
-
A synthetic promoter library for constitutive gene expression in Lactobacillus plantarum
-
1:CAS:528:DC%2BD28XjslyktbY%3D 16549665 10.1099/mic.0.28599-0
-
Rud I, Jensen PR, Naterstad K, Axelsson L (2006) A synthetic promoter library for constitutive gene expression in Lactobacillus plantarum. Microbiology 152:1011-1019
-
(2006)
Microbiology
, vol.152
, pp. 1011-1019
-
-
Rud, I.1
Jensen, P.R.2
Naterstad, K.3
Axelsson, L.4
-
28
-
-
79954939562
-
The construction of a library of synthetic promoters revealed some specific features of strong Streptomyces promoters
-
1:CAS:528:DC%2BC3MXjsFGhs7w%3D 21243353 10.1007/s00253-010-3018-0
-
Seghezzi N, Amar P, Koebmann B, Jensen PR, Virolle MJ (2011) The construction of a library of synthetic promoters revealed some specific features of strong Streptomyces promoters. Appl Microbiol Biotechnol 90:615-623
-
(2011)
Appl Microbiol Biotechnol
, vol.90
, pp. 615-623
-
-
Seghezzi, N.1
Amar, P.2
Koebmann, B.3
Jensen, P.R.4
Virolle, M.J.5
-
29
-
-
0033583512
-
Crystalline bacterial cell surface layers (S layers): From supramolecular cell structure to biomimetics and nanotechnology
-
1:CAS:528:DyaK1MXivFCnsro%3D 10.1002/(SICI)1521-3773(19990419)38: 8<1034: AID-ANIE1034>3.0.CO;2-#
-
Sleytr UB, Messner P, Pum D, Sára M (1999) Crystalline bacterial cell surface layers (S layers): from supramolecular cell structure to biomimetics and nanotechnology. Angew Chem 38:1034-1054
-
(1999)
Angew Chem
, vol.38
, pp. 1034-1054
-
-
Sleytr, U.B.1
Messner, P.2
Pum, D.3
Sára, M.4
-
30
-
-
9744254931
-
2 production by a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent
-
DOI 10.1007/s00792-004-0389-0
-
2 production by a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent. Extremophiles 8:317-323 (Pubitemid 40882693)
-
(2004)
Extremophiles
, vol.8
, Issue.4
, pp. 317-323
-
-
Sokolova, T.G.1
Jeanthon, C.2
Kostrikina, N.A.3
Chernyh, N.A.4
Lebedinsky, A.V.5
Stackebrandt, E.6
Bonch-Osmolovskaya, E.A.7
-
31
-
-
84862817382
-
Cloning and characterization of a panel of constitutive promoters for applications in pathway engineering in Saccharomyces cerevisiae
-
1:CAS:528:DC%2BC38XjvVWntrk%3D 22383307 10.1002/bit.24481
-
Sun J, Shao Z, Nair N, Wen F, Xu J, Zhao H (2012) Cloning and characterization of a panel of constitutive promoters for applications in pathway engineering in Saccharomyces cerevisiae. Biotechnol Bioeng 109:2082-2092
-
(2012)
Biotechnol Bioeng
, vol.109
, pp. 2082-2092
-
-
Sun, J.1
Shao, Z.2
Nair, N.3
Wen, F.4
Xu, J.5
Zhao, H.6
-
32
-
-
0032999636
-
Development of a shuttle vector for screening of strong promoter sequences
-
DOI 10.1023/A:1008983208118
-
Tangney M, Mitchell WJ, Dolberg-Rasmussen M (1999) Development of a shuttle vector for screening of strong promoter sequences. Biotechnol Tech 13:141-144 (Pubitemid 29153856)
-
(1999)
Biotechnology Techniques
, vol.13
, Issue.2
, pp. 141-144
-
-
Tangney, M.1
Mitchell, W.J.2
Dolberg-Rasmussen, M.3
-
33
-
-
79953282591
-
Thermococcus kodakarensis as a host for gene expression and protein secretion
-
1:CAS:528:DC%2BC3MXhtVWktLnI 3067433 21278271 10.1128/AEM.01005-10
-
Takemasa R, Yokooji Y, Yamatsu A, Atomi H, Imanaka T (2011) Thermococcus kodakarensis as a host for gene expression and protein secretion. Appl Environ Microbiol 77:2392-2398
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 2392-2398
-
-
Takemasa, R.1
Yokooji, Y.2
Yamatsu, A.3
Atomi, H.4
Imanaka, T.5
-
34
-
-
0022373259
-
Expression of an Escherichia coli β-galactosidase fusion gene in Aspergillus nidulans
-
DOI 10.1016/0378-1119(85)90028-9
-
van Gorcom RFM, Pouwels PH, Goosen T, Visser J, van den Broek HWJ, Hamer JE, Timberlake WE, van den Hondel CAMJJ (1985) Expression of an Escherichia coli beta-galactosidase fusion gene in Aspergillus nidulans. Gene 40:99-106 (Pubitemid 16144616)
-
(1985)
Gene
, vol.40
, Issue.1
, pp. 99-106
-
-
Van Gorcom, R.F.M.1
Pouwels, P.H.2
Goosen, T.3
-
35
-
-
70949102952
-
Next generation sequencing of microbial transcriptomes: Challenges and opportunities
-
19735299 10.1111/j.1574-6968.2009.01767.x
-
van Vliet AHM (2010) Next generation sequencing of microbial transcriptomes: challenges and opportunities. FEMS Microbiol Lett 302:1-7
-
(2010)
FEMS Microbiol Lett
, vol.302
, pp. 1-7
-
-
Van Vliet, A.H.M.1
-
36
-
-
0026544545
-
The influence of ribosome-binding-site elements on translational efficiency in Bacillus subtilis and Escherichia coli in vivo
-
1:CAS:528:DyaK38Xkt1ejtbs%3D 1375309 10.1111/j.1365-2958.1992.tb01548.x
-
Vellanoweth RL, Rabinowitz JC (1992) The influence of ribosome-binding-site elements on translational efficiency in Bacillus subtilis and Escherichia coli in vivo. Mol Microbiol 6:1105-1114
-
(1992)
Mol Microbiol
, vol.6
, pp. 1105-1114
-
-
Vellanoweth, R.L.1
Rabinowitz, J.C.2
-
37
-
-
84873412615
-
Overview of regulatory strategies and molecular elements in metabolic engineering of bacteria
-
1:CAS:528:DC%2BC38XhsFSqsL3P 22359157 10.1007/s12033-012-9514-y
-
Wang T, Ma X, Du G, Chen J (2012) Overview of regulatory strategies and molecular elements in metabolic engineering of bacteria. Mol Biotechnol 52:300-308
-
(2012)
Mol Biotechnol
, vol.52
, pp. 300-308
-
-
Wang, T.1
Ma, X.2
Du, G.3
Chen, J.4
-
38
-
-
70350514952
-
Pantoate kinase and phosphopantothenate synthetase, two novel enzymes necessary for CoA biosynthesis in the archaea
-
1:CAS:528:DC%2BD1MXht1Sqsb3J 19666462 10.1074/jbc.M109.009696
-
Yokooji Y, Tomita H, Atomi H, Imanaka T (2009) Pantoate kinase and phosphopantothenate synthetase, two novel enzymes necessary for CoA biosynthesis in the archaea. J Biol Chem 284:28137-28145
-
(2009)
J Biol Chem
, vol.284
, pp. 28137-28145
-
-
Yokooji, Y.1
Tomita, H.2
Atomi, H.3
Imanaka, T.4
|