메뉴 건너뛰기




Volumn 4, Issue 2, 2014, Pages 231-241

Identification of suppressors of mbk-2/DYRK by whole-genome sequencing

Author keywords

C. elegans; DYRK kinase; MBK 2; Single nucleotide polymorphism mapping; Suppressors; Whole genome sequencing

Indexed keywords

AMINOPHOSPHOLIPID; PROTEIN; PROTEIN MBK 2; RNA; UNCLASSIFIED DRUG;

EID: 84894540525     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.113.009126     Document Type: Article
Times cited : (12)

References (44)
  • 1
    • 33750478283 scopus 로고    scopus 로고
    • Depletion of the co-chaperone CDC-37 reveals two modes of PAR-6 cortical association in C
    • Beers, M., and K. Kemphues, 2006 Depletion of the co-chaperone CDC-37 reveals two modes of PAR-6 cortical association in C. elegans embryos. Development 133: 3745-3754.
    • (2006) elegans embryos. Development , vol.133 , pp. 3745-3754
    • Beers, M.1    Kemphues, K.2
  • 2
    • 0016063911 scopus 로고
    • The genetics of Caenorhabditis elegans
    • Brenner, S., 1974 The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
    • (1974) Genetics , vol.77 , pp. 71-94
    • Brenner, S.1
  • 3
    • 43049145823 scopus 로고    scopus 로고
    • PLK-1 asymmetry contributes to asynchronous cell division of C
    • Budirahardja, Y., and P. Gonczy, 2008 PLK-1 asymmetry contributes to asynchronous cell division of C. elegans embryos. Development 135: 1303-1313.
    • (2008) elegans embryos. Development , vol.135 , pp. 1303-1313
    • Budirahardja, Y.1    Gonczy, P.2
  • 4
    • 84885102270 scopus 로고    scopus 로고
    • Efficient genome editing in Caenorhabditis elegans by CRISPR-targeted homologous recombination
    • Chen, C., L. A. Fenk, and M. de Bono, 2013 Efficient genome editing in Caenorhabditis elegans by CRISPR-targeted homologous recombination. Nucleic Acids Res. 41: e193.
    • (2013) Nucleic Acids Res. , vol.41
    • Chen, C.1    Fenk, L.A.2    de Bono, M.3
  • 5
    • 70350344970 scopus 로고    scopus 로고
    • Regulation of MBK-2/DYRK by CDK-1 and the pseudophosphatases EGG-4 and EGG-5 during the oocyte-to-embryo transition
    • Cheng, K. C., R. Klancer, A. Singson, and G. Seydoux, 2009 Regulation of MBK-2/DYRK by CDK-1 and the pseudophosphatases EGG-4 and EGG-5 during the oocyte-to-embryo transition. Cell 139: 560-572.
    • (2009) Cell , vol.139 , pp. 560-572
    • Cheng, K.C.1    Klancer, R.2    Singson, A.3    Seydoux, G.4
  • 6
    • 84884923061 scopus 로고    scopus 로고
    • Transgene-Free Genome Editing in Caenorhabditis elegans Using CRISPR-Cas
    • Chiu, H., H. T. Schwartz, I. Antoshechkin, and P. W. Sternberg, 2013 Transgene-Free Genome Editing in Caenorhabditis elegans Using CRISPR-Cas. Genetics 195: 1167-1171.
    • (2013) Genetics , vol.195 , pp. 1167-1171
    • Chiu, H.1    Schwartz, H.T.2    Antoshechkin, I.3    Sternberg, P.W.4
  • 7
    • 0036185163 scopus 로고    scopus 로고
    • Multiple subunits of the Caenorhabditis elegans anaphase-promoting complex are required for chromosome segregation during meiosis I
    • Davis, E. S., L. Wille, B. A. Chestnut, P. L. Sadler, D. C. Shakes et al., 2002 Multiple subunits of the Caenorhabditis elegans anaphase-promoting complex are required for chromosome segregation during meiosis I. Genetics 160: 805-813.
    • (2002) Genetics , vol.160 , pp. 805-813
    • Davis, E.S.1    Wille, L.2    Chestnut, B.A.3    Sadler, P.L.4    Shakes, D.C.5
  • 8
    • 84884904381 scopus 로고    scopus 로고
    • Engineering the Caenorhabditis elegans genome using Cas9-triggered homologous recombination
    • Dickinson, D. J., J. D. Ward, D. J. Reiner, and B. Goldstein, 2013 Engineering the Caenorhabditis elegans genome using Cas9-triggered homologous recombination. Nat. Methods 10: 1028-1034.
    • (2013) Nat. Methods , vol.10 , pp. 1028-1034
    • Dickinson, D.J.1    Ward, J.D.2    Reiner, D.J.3    Goldstein, B.4
  • 9
    • 78149477199 scopus 로고    scopus 로고
    • C. elegans mutant identification with a one-step whole-genomesequencing and SNP mapping strategy
    • Doitsidou, M., R. J. Poole, S. Sarin, H. Bigelow, and O. Hobert, 2010 C. elegans mutant identification with a one-step whole-genomesequencing and SNP mapping strategy. PLoS ONE 5: e15435.
    • (2010) PLoS ONE , vol.5
    • Doitsidou, M.1    Poole, R.J.2    Sarin, S.3    Bigelow, H.4    Hobert, O.5
  • 10
    • 84871720224 scopus 로고    scopus 로고
    • Systematic genetic interaction screens uncover cell polarity regulators and functional redundancy
    • Fievet, B. T., J. Rodriguez, S. Naganathan, C. Lee, E. Zeiser, et al., 2012 Systematic genetic interaction screens uncover cell polarity regulators and functional redundancy. Nat. Cell Biol. 15: 103-112.
    • (2012) Nat. Cell Biol. , vol.15 , pp. 103-112
    • Fievet, B.T.1    Rodriguez, J.2    Naganathan, S.3    Lee, C.4    Zeiser, E.5
  • 11
    • 0034676457 scopus 로고    scopus 로고
    • Functional genomic analysis of C. elegans chromosome I by systematic RNA interference
    • Fraser, A. G., R. S. Kamath, P. Zipperien, M. Martinez-Campos, M. Sohrmann et al., 2000 Functional genomic analysis of C. elegans chromosome I by systematic RNA interference. Nature 408: 320-330.
    • (2000) Nature , vol.408 , pp. 320-330
    • Fraser, A.G.1    Kamath, R.S.2    Zipperien, P.3    Martinez-Campos, M.4    Sohrmann, M.5
  • 13
    • 78650308096 scopus 로고    scopus 로고
    • Cytoplasmic partitioning of P granule components is not required to specify the germline in C. elegans
    • Gallo, C. M., J. T. Wang, F. Motegi and G. Seydoux, 2010 Cytoplasmic partitioning of P granule components is not required to specify the germline in C. elegans. Science 330: 1685-1689.
    • (2010) Science , vol.330 , pp. 1685-1689
    • Gallo, C.M.1    Wang, J.T.2    Motegi, F.3    Seydoux, G.4
  • 14
    • 0034739852 scopus 로고    scopus 로고
    • Metaphase to anaphase (mat) transition-defective mutants in Caenorhabditis elegans
    • Golden, A., P. L. Sadler, M. R. Wallenfang, J. M. Schumacher, D. R. Hamill et al., 2000 Metaphase to anaphase (mat) transition-defective mutants in Caenorhabditis elegans. J. Cell Biol. 151: 1469-1482.
    • (2000) J. Cell Biol. , vol.151 , pp. 1469-1482
    • Golden, A.1    Sadler, P.L.2    Wallenfang, M.R.3    Schumacher, J.M.4    Hamill, D.R.5
  • 16
    • 0030945064 scopus 로고    scopus 로고
    • Natural variation and copulatory plug formation in Caenorhabditis elegans
    • Hodgkin, J., and T. Doniach, 1997 Natural variation and copulatory plug formation in Caenorhabditis elegans. Genetics 146: 149-164.
    • (1997) Genetics , vol.146 , pp. 149-164
    • Hodgkin, J.1    Doniach, T.2
  • 17
    • 17444423166 scopus 로고    scopus 로고
    • Systematic, RNAinterference-mediated identification of mus-101 modifier genes in Caenorhabditis elegans
    • Holway, A. H., C. Hung, and W. M. Michael, 2005 Systematic, RNAinterference-mediated identification of mus-101 modifier genes in Caenorhabditis elegans. Genetics 169: 1451-1460.
    • (2005) Genetics , vol.169 , pp. 1451-1460
    • Holway, A.H.1    Hung, C.2    Michael, W.M.3
  • 18
    • 70450177746 scopus 로고    scopus 로고
    • BFAST: an alignment tool for large scale genome resequencing
    • Homer, N., B. Merriman, and S. F. Nelson, 2009 BFAST: an alignment tool for large scale genome resequencing. PLoS ONE 4: e7767.
    • (2009) PLoS ONE , vol.4
    • Homer, N.1    Merriman, B.2    Nelson, S.F.3
  • 19
    • 84884943528 scopus 로고    scopus 로고
    • Targeted heritable mutation and gene conversion by Cas9-CRISPR in Caenorhabditis elegans
    • Katic, I., and H. Grosshans, 2013 Targeted heritable mutation and gene conversion by Cas9-CRISPR in Caenorhabditis elegans. Genetics 195: 1173-1176.
    • (2013) Genetics , vol.195 , pp. 1173-1176
    • Katic, I.1    Grosshans, H.2
  • 20
    • 0037164720 scopus 로고    scopus 로고
    • The Cdc20 homolog, FZY-1, and its interacting protein, IFY-1, are required for proper chromosome segregation in Caenorhabditis elegans
    • Kitagawa, R., E. Law, L. Tang, and A. M. Rose, 2002 The Cdc20 homolog, FZY-1, and its interacting protein, IFY-1, are required for proper chromosome segregation in Caenorhabditis elegans. Curr. Biol. 12: 2118-2123.
    • (2002) Curr. Biol. , vol.12 , pp. 2118-2123
    • Kitagawa, R.1    Law, E.2    Tang, L.3    Rose, A.M.4
  • 21
    • 84858651046 scopus 로고    scopus 로고
    • The pseudokinase NIPI-4 is a novel regulator of antimicrobial peptide gene expression
    • Labed, S. A., S. Omi, M. Gut, J. J. Ewbank, and N. Pujol, 2012 The pseudokinase NIPI-4 is a novel regulator of antimicrobial peptide gene expression. PLoS ONE 7: e33887.
    • (2012) PLoS ONE , vol.7
    • Labed, S.A.1    Omi, S.2    Gut, M.3    Ewbank, J.J.4    Pujol, N.5
  • 23
    • 54449086519 scopus 로고    scopus 로고
    • An unexpectedly high degree of specialization and a widespread involvement in sterol metabolism among the C. elegans putative aminophospholipid translocases
    • Lyssenko, N. N., Y. Miteva, S. Gilroy, W. Hanna-Rose, and R. A. Schlegel, 2008 An unexpectedly high degree of specialization and a widespread involvement in sterol metabolism among the C. elegans putative aminophospholipid translocases. BMC Dev. Biol. 8: 96.
    • (2008) BMC Dev. Biol. , vol.8 , pp. 96
    • Lyssenko, N.N.1    Miteva, Y.2    Gilroy, S.3    Hanna-Rose, W.4    Schlegel, R.A.5
  • 24
    • 84870686394 scopus 로고    scopus 로고
    • CloudMap: a cloud-based pipeline for analysis of mutant genome sequences
    • Minevich, G., D. S. Park, D. Blankenberg, R. J. Poole, and O. Hobert, 2012 CloudMap: a cloud-based pipeline for analysis of mutant genome sequences. Genetics 192: 1249-1269.
    • (2012) Genetics , vol.192 , pp. 1249-1269
    • Minevich, G.1    Park, D.S.2    Blankenberg, D.3    Poole, R.J.4    Hobert, O.5
  • 25
    • 28244500574 scopus 로고    scopus 로고
    • DYRK2 and GSK-3 phosphorylate and promote the timely degradation of OMA-1, a key regulator of the oocyte-to-embryo transition in C
    • Nishi, Y., and R. Lin, 2005 DYRK2 and GSK-3 phosphorylate and promote the timely degradation of OMA-1, a key regulator of the oocyte-to-embryo transition in C. elegans. Dev. Biol. 288: 139-149.
    • (2005) elegans. Dev. Biol. , vol.288 , pp. 139-149
    • Nishi, Y.1    Lin, R.2
  • 26
    • 0043198364 scopus 로고    scopus 로고
    • Coordinate activation of maternal protein degradation during the egg-to-embryo transition in C
    • Pellettieri, J., V. Reinke, S. K. Kim, and G. Seydoux, 2003 Coordinate activation of maternal protein degradation during the egg-to-embryo transition in C. elegans. Dev. Cell 5: 451-462.
    • (2003) elegans. Dev. Cell , vol.5 , pp. 451-462
    • Pellettieri, J.1    Reinke, V.2    Kim, S.K.3    Seydoux, G.4
  • 27
    • 0346463132 scopus 로고    scopus 로고
    • The mbk-2 kinase is required for inactivation of MEI-1/katanin in the one-cell Caenorhabditis elegans embryo
    • Quintin, S., P. E. Mains, A. Zinke, and A. A. Hyman, 2003 The mbk-2 kinase is required for inactivation of MEI-1/katanin in the one-cell Caenorhabditis elegans embryo. EMBO Rep. 4: 1175-1181.
    • (2003) EMBO Rep. , vol.4 , pp. 1175-1181
    • Quintin, S.1    Mains, P.E.2    Zinke, A.3    Hyman, A.A.4
  • 28
    • 40849136110 scopus 로고    scopus 로고
    • PAR proteins direct asymmetry of the cell cycle regulators Polo-like kinase and Cdc25
    • Rivers, D. M., S. Moreno, M. Abraham, and J. Ahringer, 2008 PAR proteins direct asymmetry of the cell cycle regulators Polo-like kinase and Cdc25. J. Cell Biol. 180: 877-885.
    • (2008) J. Cell Biol. , vol.180 , pp. 877-885
    • Rivers, D.M.1    Moreno, S.2    Abraham, M.3    Ahringer, J.4
  • 29
    • 84867487986 scopus 로고    scopus 로고
    • The oocyte-to-embryo transition
    • Robertson, S., and R. Lin, 2013 The oocyte-to-embryo transition. Adv. Exp. Med. Biol. 757: 351-372.
    • (2013) Adv. Exp. Med. Biol. , vol.757 , pp. 351-372
    • Robertson, S.1    Lin, R.2
  • 30
    • 38849199286 scopus 로고    scopus 로고
    • Widespread genetic incompatibility in C. elegans maintained by balancing selection
    • Seidel, H. S., M. V. Rockman, and L. Kruglyak, 2008 Widespread genetic incompatibility in C. elegans maintained by balancing selection. Science 319: 589-594.
    • (2008) Science , vol.319 , pp. 589-594
    • Seidel, H.S.1    Rockman, M.V.2    Kruglyak, L.3
  • 31
    • 79960915775 scopus 로고    scopus 로고
    • A novel sperm-delivered toxin causes late-stage embryo lethality and transmission ratio distortion in C
    • Seidel, H. S., M. Ailion, J. Li, A. van Oudenaarden, M. V. Rockman et al., 2011 A novel sperm-delivered toxin causes late-stage embryo lethality and transmission ratio distortion in C. elegans. PLoS Biol. 9: e1001115.
    • (2011) elegans. PLoS Biol. , vol.9
    • Seidel, H.S.1    Ailion, M.2    Li, J.3    van Oudenaarden, A.4    Rockman, M.V.5
  • 32
    • 84878851513 scopus 로고    scopus 로고
    • Structures of Down syndrome kinases, DYRKs, reveal mechanisms of kinase activation and substrate recognition
    • Soundararajan, M., A. K. Roos, P. Savitsky, P. Filippakopoulos, A. N. Kettenbach et al., 2013 Structures of Down syndrome kinases, DYRKs, reveal mechanisms of kinase activation and substrate recognition. Structure 21: 986-996.
    • (2013) Structure , vol.21 , pp. 986-996
    • Soundararajan, M.1    Roos, A.K.2    Savitsky, P.3    Filippakopoulos, P.4    Kettenbach, A.N.5
  • 33
    • 0034192639 scopus 로고    scopus 로고
    • MEI-1/MEI-2 katanin-like microtubule severing activity is required for Caenorhabditis elegans meiosis
    • Srayko, M., D. W. Buster, O. A. Bazirgan, F. J. McNally, and P. E. Mains, 2000 MEI-1/MEI-2 katanin-like microtubule severing activity is required for Caenorhabditis elegans meiosis. Genes Dev. 14: 1072-1084.
    • (2000) Genes Dev. , vol.14 , pp. 1072-1084
    • Srayko, M.1    Buster, D.W.2    Bazirgan, O.A.3    McNally, F.J.4    Mains, P.E.5
  • 34
    • 79251560009 scopus 로고    scopus 로고
    • Functional redundancy of paralogs of an anaphase promoting complex/cyclosome subunit in Caenorhabditis elegans meiosis
    • Stein, K. K., J. E. Nesmith, B. D. Ross, and A. Golden, 2010 Functional redundancy of paralogs of an anaphase promoting complex/cyclosome subunit in Caenorhabditis elegans meiosis. Genetics 186: 1285-1293.
    • (2010) Genetics , vol.186 , pp. 1285-1293
    • Stein, K.K.1    Nesmith, J.E.2    Ross, B.D.3    Golden, A.4
  • 35
    • 30044443400 scopus 로고    scopus 로고
    • The C. elegans DYRK kinase MBK-2 marks oocyte proteins for degradation in response to meiotic maturation
    • Stitzel, M. L., J. Pellettieri, and G. Seydoux, 2006 The C. elegans DYRK kinase MBK-2 marks oocyte proteins for degradation in response to meiotic maturation. Curr. Biol. 16: 56-62.
    • (2006) Curr. Biol. , vol.16 , pp. 56-62
    • Stitzel, M.L.1    Pellettieri, J.2    Seydoux, G.3
  • 36
    • 34548480470 scopus 로고    scopus 로고
    • Regulation of MBK-2/ Dyrk kinase by dynamic cortical anchoring during the oocyte-to-zygote transition
    • Stitzel, M. L., K. C. Cheng, and G. Seydoux, 2007 Regulation of MBK-2/ Dyrk kinase by dynamic cortical anchoring during the oocyte-to-zygote transition. Curr Biol. 17: 1545-1554.
    • (2007) Curr Biol. , vol.17 , pp. 1545-1554
    • Stitzel, M.L.1    Cheng, K.C.2    Seydoux, G.3
  • 38
    • 0021064382 scopus 로고
    • Generation of asymmetry and segregation of germ-line granules in early C
    • Strome, S., and W. B. Wood, 1983 Generation of asymmetry and segregation of germ-line granules in early C. elegans embryos. Cell 35: 15-25.
    • (1983) elegans embryos. Cell , vol.35 , pp. 15-25
    • Strome, S.1    Wood, W.B.2
  • 39
    • 84865695733 scopus 로고    scopus 로고
    • Quantitative analysis of HSP90-client interactions reveals principles of substrate recognition
    • Taipale, M., I. Krykbaeva, M. Koeva, C. Kayatekin, K. D. Westover et al., 2012 Quantitative analysis of HSP90-client interactions reveals principles of substrate recognition. Cell 150: 987-1001.
    • (2012) Cell , vol.150 , pp. 987-1001
    • Taipale, M.1    Krykbaeva, I.2    Koeva, M.3    Kayatekin, C.4    Westover, K.D.5
  • 40
    • 0032578911 scopus 로고    scopus 로고
    • Specific interference by ingested dsRNA
    • Timmons, L., and A. Fire, 1998 Specific interference by ingested dsRNA. Nature 395: 854.
    • (1998) Nature , vol.395 , pp. 854
    • Timmons, L.1    Fire, A.2
  • 41
    • 84884968656 scopus 로고    scopus 로고
    • Heritable custom genomic modifications in Caenorhabditis elegans via a CRISPR-Cas9 system
    • Tzur, Y. B., A. E. Friedland, S. Nadarajan, G. M. Church, J. A. Calarco et al., 2013 Heritable custom genomic modifications in Caenorhabditis elegans via a CRISPR-Cas9 system. Genetics 195: 1181-1185.
    • (2013) Genetics , vol.195 , pp. 1181-1185
    • Tzur, Y.B.1    Friedland, A.E.2    Nadarajan, S.3    Church, G.M.4    Calarco, J.A.5
  • 43
    • 77956534324 scopus 로고    scopus 로고
    • ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
    • Wang, K., M. Li, and H. Hakonarson, 2010 ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res. 38: e164.
    • (2010) Nucleic Acids Res. , vol.38
    • Wang, K.1    Li, M.2    Hakonarson, H.3
  • 44
    • 0034657306 scopus 로고    scopus 로고
    • CHE-3, a cytosolic dynein heavy chain, is required for sensory cilia structure and function in Caenorhabditis elegans
    • Wicks, S. R., C. J. de Vries, H. G. van Luenen, and R. H. Plasterk, 2000 CHE-3, a cytosolic dynein heavy chain, is required for sensory cilia structure and function in Caenorhabditis elegans. Dev. Biol. 221: 295-307.
    • (2000) Dev. Biol. , vol.221 , pp. 295-307
    • Wicks, S.R.1    de Vries, C.J.2    van Luenen, H.G.3    Plasterk, R.H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.