-
1
-
-
0021924005
-
As assessment of Bacteroides fragilis group organisms as indicators of human faecal pollution
-
Allsop K., Stickler D.J. As assessment of Bacteroides fragilis group organisms as indicators of human faecal pollution. J. Appl. Bacteriol. 1985, 58:95-99.
-
(1985)
J. Appl. Bacteriol.
, vol.58
, pp. 95-99
-
-
Allsop, K.1
Stickler, D.J.2
-
2
-
-
0035046093
-
Optimisation and standardisation of a method for detecting and enumerating bacteriophages infecting Bacteroides fragilis
-
Araujo R., Muniesa M., Méndez J., Puig A., Queralt N., Lucena F., Jofre J. Optimisation and standardisation of a method for detecting and enumerating bacteriophages infecting Bacteroides fragilis. J. Virol. Met. 2001, 93:127-136.
-
(2001)
J. Virol. Met.
, vol.93
, pp. 127-136
-
-
Araujo, R.1
Muniesa, M.2
Méndez, J.3
Puig, A.4
Queralt, N.5
Lucena, F.6
Jofre, J.7
-
3
-
-
0028999410
-
Distribution comparison between coliphages and phages of anaerobic bacteria (Bacteroides fragilis) in water sources, and their reliability as faecal pollution indicators in drinking water
-
Armon R., Kott Y. Distribution comparison between coliphages and phages of anaerobic bacteria (Bacteroides fragilis) in water sources, and their reliability as faecal pollution indicators in drinking water. Water Sci. Technol. 1995, 31:5-6.
-
(1995)
Water Sci. Technol.
, vol.31
, pp. 5-6
-
-
Armon, R.1
Kott, Y.2
-
4
-
-
77749285627
-
Inactivation of murine norovirus 1 and Bacteroides fragilis phage B40-8 by mesophilic and thermophilic anaerobic digestion of pig slurry
-
Baert L., De Gusseme B., Boon N., Verstrase W., Debevere J., Uyttendaele M. Inactivation of murine norovirus 1 and Bacteroides fragilis phage B40-8 by mesophilic and thermophilic anaerobic digestion of pig slurry. Appl. Environ. Microbiol. 2010, 76:2013-2017.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 2013-2017
-
-
Baert, L.1
De Gusseme, B.2
Boon, N.3
Verstrase, W.4
Debevere, J.5
Uyttendaele, M.6
-
5
-
-
66949122886
-
Efficacy of sodium hypochlorite and peroxacetic acid to reduce murine norovirus 1, B40-8, Listeria monocytogenes, and Escherichia coli O157:H7 on shredded iceberg lettuce and in residual water
-
Baert L., Vandekinderen I., Devlieghere F., Van Coillie E., Debevere J., Uyttendaele M. Efficacy of sodium hypochlorite and peroxacetic acid to reduce murine norovirus 1, B40-8, Listeria monocytogenes, and Escherichia coli O157:H7 on shredded iceberg lettuce and in residual water. J. Food Prot. 2009, 72:1047-1054.
-
(2009)
J. Food Prot.
, vol.72
, pp. 1047-1054
-
-
Baert, L.1
Vandekinderen, I.2
Devlieghere, F.3
Van Coillie, E.4
Debevere, J.5
Uyttendaele, M.6
-
6
-
-
78649686533
-
Persistence of Bacteroides species populations in a river as measured by molecular and culture techniques
-
Ballesté E., Blanch A.R. Persistence of Bacteroides species populations in a river as measured by molecular and culture techniques. Appl. Environ. Microbiol. 2010, 76:7608-7616.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 7608-7616
-
-
Ballesté, E.1
Blanch, A.R.2
-
7
-
-
38949183032
-
Machine learning methods for microbial source tracking
-
Belanche-Muñoz L., Blanch A. Machine learning methods for microbial source tracking. Environ. Model. Softw. 2008, 23:741-750.
-
(2008)
Environ. Model. Softw.
, vol.23
, pp. 741-750
-
-
Belanche-Muñoz, L.1
Blanch, A.2
-
8
-
-
0033774937
-
A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16sRNA
-
Bernhard A.E., Field K.G. A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16sRNA. Appl. Environ. Microbiol. 2000, 66:4571-5474.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 4571-5474
-
-
Bernhard, A.E.1
Field, K.G.2
-
9
-
-
13744263449
-
Tracking the origin of faecal pollution in surface water. An ongoing project within the European Union research programme
-
Blanch A., Belanche-Muñoz L., Bonjoch X., Ebdon J., Gantzer C., Lucena F., Ottoson J., Kourtis C., Iversen A., Kühn I., Moce L., Muniesa M., Schwartzbrod J., Skraber S., Papageorgiou G., Taylor H.D., Wallis J., Jofre J. Tracking the origin of faecal pollution in surface water. An ongoing project within the European Union research programme. J. Water Health 2004, 2:249-260.
-
(2004)
J. Water Health
, vol.2
, pp. 249-260
-
-
Blanch, A.1
Belanche-Muñoz, L.2
Bonjoch, X.3
Ebdon, J.4
Gantzer, C.5
Lucena, F.6
Ottoson, J.7
Kourtis, C.8
Iversen, A.9
Kühn, I.10
Moce, L.11
Muniesa, M.12
Schwartzbrod, J.13
Skraber, S.14
Papageorgiou, G.15
Taylor, H.D.16
Wallis, J.17
Jofre, J.18
-
10
-
-
33748772520
-
Integrated analysis of established and novel microbial and chemical methods for microbial source tracking
-
Blanch A., Belanche-Muñoz L., Bonjoch X., Ebdon J., Gantzer C., Lucena F., Ottoson J., Kourtis C., Iversen A., Kühn I., Moce L., Muniesa M., Schwartzbrod J., Skraber S., Papageorgiou G., Taylor H.D., Wallis J., Jofre J. Integrated analysis of established and novel microbial and chemical methods for microbial source tracking. Appl. Environ. Microbiol. 2006, 72:5915-5926.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5915-5926
-
-
Blanch, A.1
Belanche-Muñoz, L.2
Bonjoch, X.3
Ebdon, J.4
Gantzer, C.5
Lucena, F.6
Ottoson, J.7
Kourtis, C.8
Iversen, A.9
Kühn, I.10
Moce, L.11
Muniesa, M.12
Schwartzbrod, J.13
Skraber, S.14
Papageorgiou, G.15
Taylor, H.D.16
Wallis, J.17
Jofre, J.18
-
11
-
-
77749255120
-
Minimal requirements for parameters to be used in the development of predictive models for microbial source tracking: somatic coliphages and phages infecting Bacteroides as examples
-
Blanch A.R., Lucena F., Payán A., Jofre J. Minimal requirements for parameters to be used in the development of predictive models for microbial source tracking: somatic coliphages and phages infecting Bacteroides as examples. J. Environ. Detect. 2008, 1:2-20.
-
(2008)
J. Environ. Detect.
, vol.1
, pp. 2-20
-
-
Blanch, A.R.1
Lucena, F.2
Payán, A.3
Jofre, J.4
-
12
-
-
77950347641
-
Enterophages, a group of phages infecting Enterococcus faecalis, and their potential as alternate indicators of human faecal contamination
-
Bonilla N., Santiago T., Marcos P., Urdaneta M., Domingo J.S., Toranzos G.A. Enterophages, a group of phages infecting Enterococcus faecalis, and their potential as alternate indicators of human faecal contamination. Water Sci. Technol. 2010, 61:293-300.
-
(2010)
Water Sci. Technol.
, vol.61
, pp. 293-300
-
-
Bonilla, N.1
Santiago, T.2
Marcos, P.3
Urdaneta, M.4
Domingo, J.S.5
Toranzos, G.A.6
-
13
-
-
84963036840
-
Bacteriophages of Bacteroides
-
Booth S.J., Van Tassell R.L., Johnson J.L., Wilkins T.D. Bacteriophages of Bacteroides. Rev. Infect. Dis. 1979, 2:325-334.
-
(1979)
Rev. Infect. Dis.
, vol.2
, pp. 325-334
-
-
Booth, S.J.1
Van Tassell, R.L.2
Johnson, J.L.3
Wilkins, T.D.4
-
14
-
-
34248228283
-
Mitochondrial multiplex real-time PCR as a source tracking method in faecal contaminated effluents
-
Caldwell J.M., Raley M.E., Levine J.F. Mitochondrial multiplex real-time PCR as a source tracking method in faecal contaminated effluents. Environ. Sci. Technol. 2007, 41:3277-3283.
-
(2007)
Environ. Sci. Technol.
, vol.41
, pp. 3277-3283
-
-
Caldwell, J.M.1
Raley, M.E.2
Levine, J.F.3
-
15
-
-
85189277010
-
-
Campos, C., 2013. Personnel communication. Claudia Campos (Universidad Javeriana).
-
Campos, C., 2013. Personnel communication. Claudia Campos (Universidad Javeriana. ). mailto:campos@javeriana.edu.co.
-
-
-
-
16
-
-
0027336589
-
Comparative survival of indicator viruses and enteric viruses in seawater and sediment
-
Chung H., Sobsey M.D. Comparative survival of indicator viruses and enteric viruses in seawater and sediment. Water Sci. Technol. 1993, 27:425-428.
-
(1993)
Water Sci. Technol.
, vol.27
, pp. 425-428
-
-
Chung, H.1
Sobsey, M.D.2
-
17
-
-
0021713470
-
Differentiation of Bacteroides ovatus and Bacteroides tethaiotaomicron by means of bacteriophages
-
Cooper S.W., Szymczak E.G., Jacobus N.V., Tally F.P. Differentiation of Bacteroides ovatus and Bacteroides tethaiotaomicron by means of bacteriophages. J. Clin. Microbiol. 1984, 20:1122-1125.
-
(1984)
J. Clin. Microbiol.
, vol.20
, pp. 1122-1125
-
-
Cooper, S.W.1
Szymczak, E.G.2
Jacobus, N.V.3
Tally, F.P.4
-
18
-
-
53449085475
-
Microbial indicators and pathogens: removal, relationships and predictive capabilities in water reclamation facilities
-
Costán-Longares A., Montemayor M., Payán A., Méndez J., Jofre J., Mujeriego R., Lucena F. Microbial indicators and pathogens: removal, relationships and predictive capabilities in water reclamation facilities. Water Res. 2008, 42:4439-4448.
-
(2008)
Water Res.
, vol.42
, pp. 4439-4448
-
-
Costán-Longares, A.1
Montemayor, M.2
Payán, A.3
Méndez, J.4
Jofre, J.5
Mujeriego, R.6
Lucena, F.7
-
19
-
-
84863090928
-
The effect of UV-C radiation (254 nm) on candidate microbial source tracking phages infecting a human-specific strain of Bacteroides fragilis (GB-124)
-
Diston D., Ebdon J.E., Taylor H.D. The effect of UV-C radiation (254 nm) on candidate microbial source tracking phages infecting a human-specific strain of Bacteroides fragilis (GB-124). J. Water Health 2012, 10(2):262-270.
-
(2012)
J. Water Health
, vol.10
, Issue.2
, pp. 262-270
-
-
Diston, D.1
Ebdon, J.E.2
Taylor, H.D.3
-
20
-
-
0036164827
-
Removal and inactivation of indicator bacteriophages in fresh waters
-
Durán A.E., Muniesa M., Méndez X., Valero F., Lucena F., Jofre J. Removal and inactivation of indicator bacteriophages in fresh waters. J. Appl. Microbiol. 2002, 92:338-347.
-
(2002)
J. Appl. Microbiol.
, vol.92
, pp. 338-347
-
-
Durán, A.E.1
Muniesa, M.2
Méndez, X.3
Valero, F.4
Lucena, F.5
Jofre, J.6
-
21
-
-
0038048462
-
Usefulness of different groups of bacteriophages as model micro-organisms for evaluating chlorination
-
Durán A.E., Muniesa M., Mocé-Llivina L., Campos C., Jofre J., Lucena F. Usefulness of different groups of bacteriophages as model micro-organisms for evaluating chlorination. J. Appl. Microbiol. 2003, 95:29-37.
-
(2003)
J. Appl. Microbiol.
, vol.95
, pp. 29-37
-
-
Durán, A.E.1
Muniesa, M.2
Mocé-Llivina, L.3
Campos, C.4
Jofre, J.5
Lucena, F.6
-
22
-
-
34547455844
-
The application of a recently isolated strain of Bacteroides (GB-124) to identify human sources of faecal pollution in a temperate river catchment
-
Ebdon J., Muniesa M., Taylor H. The application of a recently isolated strain of Bacteroides (GB-124) to identify human sources of faecal pollution in a temperate river catchment. Water Res. 2007, 41:3683-3690.
-
(2007)
Water Res.
, vol.41
, pp. 3683-3690
-
-
Ebdon, J.1
Muniesa, M.2
Taylor, H.3
-
23
-
-
84855934664
-
Phages of Bacteroides (GB-124): a novel tool for viral waterborne disease control?
-
Ebdon J.E., Sellwood J., Shore J., Taylor H.D. Phages of Bacteroides (GB-124): a novel tool for viral waterborne disease control?. Environ. Sci. Technol. 2012, 46(2):1163-1169.
-
(2012)
Environ. Sci. Technol.
, vol.46
, Issue.2
, pp. 1163-1169
-
-
Ebdon, J.E.1
Sellwood, J.2
Shore, J.3
Taylor, H.D.4
-
24
-
-
40949113443
-
-
Elsevier/Academic Press, London
-
Fauquet C., Mayo M.A., Maniloff J., Desselberger U., Ball L.A. Virus Taxonomy: Eight Report of the International Committee on Taxonomy of Viruses 2005, Elsevier/Academic Press, London.
-
(2005)
Virus Taxonomy: Eight Report of the International Committee on Taxonomy of Viruses
-
-
Fauquet, C.1
Mayo, M.A.2
Maniloff, J.3
Desselberger, U.4
Ball, L.A.5
-
25
-
-
34547531503
-
Faecal source tracking, the indicator paradigm, and managing water quality
-
Field K.G., Samadpour M. Faecal source tracking, the indicator paradigm, and managing water quality. Water Res. 2007, 41:3517-3538.
-
(2007)
Water Res.
, vol.41
, pp. 3517-3538
-
-
Field, K.G.1
Samadpour, M.2
-
26
-
-
34249742034
-
Seasonality of infectious diseases
-
Fisman D.N. Seasonality of infectious diseases. Annu. Rev. Public Helath 2007, 28:127-143.
-
(2007)
Annu. Rev. Public Helath
, vol.28
, pp. 127-143
-
-
Fisman, D.N.1
-
27
-
-
0001856441
-
Distribution of coliphages in the environment: general considerations
-
John Wiley & Sons, New York, S.M. Goyal, C.P. Gerba, G. Bitton (Eds.)
-
Furuse K. Distribution of coliphages in the environment: general considerations. Phage Ecology 1987, John Wiley & Sons, New York. S.M. Goyal, C.P. Gerba, G. Bitton (Eds.).
-
(1987)
Phage Ecology
-
-
Furuse, K.1
-
28
-
-
0031766616
-
Detection of infectious enteroviruses, enterovirus genomes, somatic coliphages, and Bacteroides fragilis phages in treated wastewater
-
Gantzer C., Maul A., Audic J.M., Schwartzbrod L. Detection of infectious enteroviruses, enterovirus genomes, somatic coliphages, and Bacteroides fragilis phages in treated wastewater. Appl. Environ. Microbiol. 1998, 64:4307-4312.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4307-4312
-
-
Gantzer, C.1
Maul, A.2
Audic, J.M.3
Schwartzbrod, L.4
-
30
-
-
79958003752
-
Isolation of bacteriophage host strains of Bacteroides species suitable for tracking sources of animal faecal pollution in water
-
Gómez-Doñate M., Payán A., Cortés I., Blanch A.R., Lucena F., Jofre J., Muniesa M. Isolation of bacteriophage host strains of Bacteroides species suitable for tracking sources of animal faecal pollution in water. Environ. Microbiol. 2011, 13:1622-1631.
-
(2011)
Environ. Microbiol.
, vol.13
, pp. 1622-1631
-
-
Gómez-Doñate, M.1
Payán, A.2
Cortés, I.3
Blanch, A.R.4
Lucena, F.5
Jofre, J.6
Muniesa, M.7
-
31
-
-
0011082483
-
-
Water Research Commission Report n°321/1/93, Water Research Commission, Pretoria. South Africa
-
Grabow W.O.K., Holtzhausen C.S., de Villiers C.J. Research on Bacteriophages as Indicators of Water Quality 1990-1992 1993, Water Research Commission Report n°321/1/93, Water Research Commission, Pretoria. South Africa.
-
(1993)
Research on Bacteriophages as Indicators of Water Quality 1990-1992
-
-
Grabow, W.O.K.1
Holtzhausen, C.S.2
de Villiers, C.J.3
-
32
-
-
36549012275
-
Occurrence and levels of indicators and selected pathogens in different sludges and biosolids
-
Guzmán C., Jofre J., Montemayor M., Lucena F. Occurrence and levels of indicators and selected pathogens in different sludges and biosolids. J. Appl. Microbiol. 2007, 103:2420-2429.
-
(2007)
J. Appl. Microbiol.
, vol.103
, pp. 2420-2429
-
-
Guzmán, C.1
Jofre, J.2
Montemayor, M.3
Lucena, F.4
-
33
-
-
84861571695
-
-
Springer, New York
-
Hagedorn C., Harwood V.J., Blanch A. Microbial Source Tracking: Methods, Applications, and Case Studies 2011, 642. Springer, New York.
-
(2011)
Microbial Source Tracking: Methods, Applications, and Case Studies
, pp. 642
-
-
Hagedorn, C.1
Harwood, V.J.2
Blanch, A.3
-
34
-
-
84861571695
-
Chemical-based faecal source tracking methods
-
Springer, NY, Chapter 8, C. Hagedorn, A.R. Blanch, V.J. Harwood (Eds.)
-
Hagedorn C., Weisberg S.B. Chemical-based faecal source tracking methods. Microbial Source Tracking: Methods, Applications, and Case Studies 2011, Springer, NY, Chapter 8. C. Hagedorn, A.R. Blanch, V.J. Harwood (Eds.).
-
(2011)
Microbial Source Tracking: Methods, Applications, and Case Studies
-
-
Hagedorn, C.1
Weisberg, S.B.2
-
35
-
-
62149141322
-
Escherichia coli populations in great lakes waterfowl exhibit spatial stability and temporal shifting
-
Hansen D.L., Ishii S., Sadowsky M.J., Hicks R.E. Escherichia coli populations in great lakes waterfowl exhibit spatial stability and temporal shifting. Appl. Environ. Microbiol. 2009, 75:1546-1551.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 1546-1551
-
-
Hansen, D.L.1
Ishii, S.2
Sadowsky, M.J.3
Hicks, R.E.4
-
36
-
-
0036628884
-
Geographic variability of Escherichia coli ribotypes from animals in Idaho and Georgia
-
Hartel P.G., Summer J.D., Hill J.L., Collins J.V., Entry J.A., Segars W.I. Geographic variability of Escherichia coli ribotypes from animals in Idaho and Georgia. J. Environ. Qual. 2002, 31(4):1273-1278.
-
(2002)
J. Environ. Qual.
, vol.31
, Issue.4
, pp. 1273-1278
-
-
Hartel, P.G.1
Summer, J.D.2
Hill, J.L.3
Collins, J.V.4
Entry, J.A.5
Segars, W.I.6
-
37
-
-
51649104135
-
Genome sequence of the Bacteroides fragilis ATCC 51477-B1
-
Hawkins S.A., Layton A.C., Ripp S., Williams D., Sayler G.S. Genome sequence of the Bacteroides fragilis ATCC 51477-B1. Virology J. 2008, 5:97-101.
-
(2008)
Virology J.
, vol.5
, pp. 97-101
-
-
Hawkins, S.A.1
Layton, A.C.2
Ripp, S.3
Williams, D.4
Sayler, G.S.5
-
39
-
-
0028839565
-
Genotyping male-specific RNA coliphages by hybridization with oligonucleotide probes
-
Hsu F.C., Shieh Y.S., van Duin J., Beekwilder M.J., Sobsey M.D. Genotyping male-specific RNA coliphages by hybridization with oligonucleotide probes. Appl. Environ. Microbiol. 1995, 61:3960-3966.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 3960-3966
-
-
Hsu, F.C.1
Shieh, Y.S.2
van Duin, J.3
Beekwilder, M.J.4
Sobsey, M.D.5
-
41
-
-
85189254188
-
-
Personnel communication
-
Jebri S., Yahya M. CNSTN, Unité d'application agricole et médicales des technologies nucléaires, TechnopÔle de Sidi Thabet, 2020 Sidi Thabet, Tunisia 2013, Personnel communication.
-
(2013)
CNSTN, Unité d'application agricole et médicales des technologies nucléaires, TechnopÔle de Sidi Thabet, 2020 Sidi Thabet, Tunisia
-
-
Jebri, S.1
Yahya, M.2
-
42
-
-
0029117722
-
Potential usefulness of bacteriophages that infect Bacteroides fragilis as model organisms for monitoring virus removal in drinking water
-
Jofre J., Ollé E., Ribas F., Vidal A., Lucena F. Potential usefulness of bacteriophages that infect Bacteroides fragilis as model organisms for monitoring virus removal in drinking water. Appl. Environ. Microbiol. 1995, 61:3227-3231.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 3227-3231
-
-
Jofre, J.1
Ollé, E.2
Ribas, F.3
Vidal, A.4
Lucena, F.5
-
43
-
-
84868304110
-
Phage methods
-
Springer, NY
-
Jofre J., Stewart J.R., Grabow W. phage methods. Microbial Source Tracking: Methods, Applications, and Case Studies 2011, vol. 6:137-156. Springer, NY.
-
(2011)
Microbial Source Tracking: Methods, Applications, and Case Studies
, vol.6
, pp. 137-156
-
-
Jofre, J.1
Stewart, J.R.2
Grabow, W.3
-
44
-
-
25144460157
-
-
Final Report, Virginia Institute of Marine Sciences, College of Williams, Mary, Gloucester Point, Virginia, USA
-
Kator H., Rhodes M. Evaluation of Bacteroides fragilis Bacteriophages, a Candidate Human-specific Indicator of Faecal Contamination from Shellfish Growing Waters 1992, Final Report, Virginia Institute of Marine Sciences, College of Williams, Mary, Gloucester Point, Virginia, USA.
-
(1992)
Evaluation of Bacteroides fragilis Bacteriophages, a Candidate Human-specific Indicator of Faecal Contamination from Shellfish Growing Waters
-
-
Kator, H.1
Rhodes, M.2
-
45
-
-
0025748153
-
Isolation and characterization of lytic phages from Bacteroides ruminicola ss brevis
-
Klieve A.V., Gregg K., Bauchop T. Isolation and characterization of lytic phages from Bacteroides ruminicola ss brevis. Curr. Microbiol. 1991, 23:183-187.
-
(1991)
Curr. Microbiol.
, vol.23
, pp. 183-187
-
-
Klieve, A.V.1
Gregg, K.2
Bauchop, T.3
-
46
-
-
0022869181
-
Characteristics of Bacteroides fragilis bacteriophages and comparison of their DNAs
-
Kory M.M., Booth S.J. Characteristics of Bacteroides fragilis bacteriophages and comparison of their DNAs. Curr. Microbiol. 1986, 14:199-203.
-
(1986)
Curr. Microbiol.
, vol.14
, pp. 199-203
-
-
Kory, M.M.1
Booth, S.J.2
-
47
-
-
82955205921
-
Comparison of the gut microbiota of healthy adult twins living in South Korea and the United States
-
Lee S., Sung J., Lee J.E., Ko G.P. Comparison of the gut microbiota of healthy adult twins living in South Korea and the United States. Appl. Environ. Microbiol. 2011, 77:7433-7437.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 7433-7437
-
-
Lee, S.1
Sung, J.2
Lee, J.E.3
Ko, G.P.4
-
48
-
-
0030456951
-
Using faecal sterols from humans and animals to distinguish faecal pollution in receiving waters
-
Leeming R., Ball A., Ashbolt N., Nichols P. Using faecal sterols from humans and animals to distinguish faecal pollution in receiving waters. Water Res. 1996, 30:2893-2900.
-
(1996)
Water Res.
, vol.30
, pp. 2893-2900
-
-
Leeming, R.1
Ball, A.2
Ashbolt, N.3
Nichols, P.4
-
49
-
-
46249085739
-
Evolution of mammals and their gut microbes
-
Ley R.E., Hamady M., Lozupone C., Turnbaugh P.J., Ramey R.R., Bircher J.S., Schlegel M.L., Tucker T.A., Schrenzel M.D., Knight R., Gordon J.I. Evolution of mammals and their gut microbes. Science 2008, 320:1647-1651.
-
(2008)
Science
, vol.320
, pp. 1647-1651
-
-
Ley, R.E.1
Hamady, M.2
Lozupone, C.3
Turnbaugh, P.J.4
Ramey, R.R.5
Bircher, J.S.6
Schlegel, M.L.7
Tucker, T.A.8
Schrenzel, M.D.9
Knight, R.10
Gordon, J.I.11
-
50
-
-
6344272639
-
Reduction of bacterial indicators and bacteriophages infecting faecal bacteria in primary and secondary wastewater treatments
-
Lucena F., Durán A.E., Morón A., Calderón E., Campos C., Gantzer C., Skraber S., Jofre J. Reduction of bacterial indicators and bacteriophages infecting faecal bacteria in primary and secondary wastewater treatments. J. Appl. Microbiol. 2004, 97:1069-1076.
-
(2004)
J. Appl. Microbiol.
, vol.97
, pp. 1069-1076
-
-
Lucena, F.1
Durán, A.E.2
Morón, A.3
Calderón, E.4
Campos, C.5
Gantzer, C.6
Skraber, S.7
Jofre, J.8
-
51
-
-
0038216550
-
Occurrence and densities of bacteriophages proposed as indicators and bacterial indicators in river waters from Europe and South America
-
Lucena F., Mendez X., Morón A., Calderón E., Campos C., Guerrero A., Cárdenas M., Gantzer C., Shwartzbrood L., Skraber S., Jofre J. Occurrence and densities of bacteriophages proposed as indicators and bacterial indicators in river waters from Europe and South America. J. Appl. Microbiol. 2003, 94:808-815.
-
(2003)
J. Appl. Microbiol.
, vol.94
, pp. 808-815
-
-
Lucena, F.1
Mendez, X.2
Morón, A.3
Calderón, E.4
Campos, C.5
Guerrero, A.6
Cárdenas, M.7
Gantzer, C.8
Shwartzbrood, L.9
Skraber, S.10
Jofre, J.11
-
52
-
-
0037192525
-
Microbiologists on the trail of polluting bacteria
-
Malakoff D. Microbiologists on the trail of polluting bacteria. Science 2002, 295:2352-2353.
-
(2002)
Science
, vol.295
, pp. 2352-2353
-
-
Malakoff, D.1
-
53
-
-
33745903132
-
Application of Bacteroides fragilis phages as an alternative indicator of sewage pollution in Tampa Bay, Florida
-
McLaughlin M.R., Rose J.B. Application of Bacteroides fragilis phages as an alternative indicator of sewage pollution in Tampa Bay, Florida. Estuaries Coasts 2007, 29:246-256.
-
(2007)
Estuaries Coasts
, vol.29
, pp. 246-256
-
-
McLaughlin, M.R.1
Rose, J.B.2
-
54
-
-
18144436914
-
Standardised evaluation of the performance of a simple membrane filtration-elution method to concentrate bacteriophages from drinking water
-
Méndez J., Audicana A., Isern A., Llaneza J., Moreno B., Tarancón M.L., Jofre J., Lucena F. Standardised evaluation of the performance of a simple membrane filtration-elution method to concentrate bacteriophages from drinking water. J. Virol. Met. 2004, 117:19-25.
-
(2004)
J. Virol. Met.
, vol.117
, pp. 19-25
-
-
Méndez, J.1
Audicana, A.2
Isern, A.3
Llaneza, J.4
Moreno, B.5
Tarancón, M.L.6
Jofre, J.7
Lucena, F.8
-
57
-
-
0037338315
-
Survival of bacterial indicator species and bacteriophages after thermal treatment of sludge and sewage
-
Mocé-Llivina L., Muniesa M., Pimenta-Vale H., Lucena F., Jofre J. Survival of bacterial indicator species and bacteriophages after thermal treatment of sludge and sewage. Appl. Environ. Microbiol. 2003, 69:1452-1456.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 1452-1456
-
-
Mocé-Llivina, L.1
Muniesa, M.2
Pimenta-Vale, H.3
Lucena, F.4
Jofre, J.5
-
58
-
-
84868302661
-
Use of abundance ratios of somatic coliphages and bacteriophages of Bacteroides thetaiotaomicron GA17 for microbial source identification
-
Muniesa M., Lucena F., Blanch A.R., Payán A., Jofre J. Use of abundance ratios of somatic coliphages and bacteriophages of Bacteroides thetaiotaomicron GA17 for microbial source identification. Water Res. 2012, 46:6410-6418.
-
(2012)
Water Res.
, vol.46
, pp. 6410-6418
-
-
Muniesa, M.1
Lucena, F.2
Blanch, A.R.3
Payán, A.4
Jofre, J.5
-
59
-
-
82955227659
-
Lacnospiraceae and Bacteroidales alternative faecal indicators reveal chronic human sewage contamination in an urban harbour. Applied and Environmental
-
Newton R.J., VandeWalle J.L., Borchardt M.A., Gorelick M.H., McLellan S.L. Lacnospiraceae and Bacteroidales alternative faecal indicators reveal chronic human sewage contamination in an urban harbour. Applied and Environmental. Microbiology 2011, 77:6972-6981.
-
(2011)
Microbiology
, vol.77
, pp. 6972-6981
-
-
Newton, R.J.1
VandeWalle, J.L.2
Borchardt, M.A.3
Gorelick, M.H.4
McLellan, S.L.5
-
60
-
-
79951946980
-
Integrated analysis of water quality parameters for cost-effective faecal pollution management in river catchments
-
Nname D.E., Ebdon J.E., Taylor H.D. Integrated analysis of water quality parameters for cost-effective faecal pollution management in river catchments. Water Res. 2011, 45:2235-2246.
-
(2011)
Water Res.
, vol.45
, pp. 2235-2246
-
-
Nname, D.E.1
Ebdon, J.E.2
Taylor, H.D.3
-
61
-
-
84865094411
-
Comparative (meta) genomic analysis and ecological profiling of human gut-specific bacteriophage B124-14
-
Ogilvie L.A., Caplin J., Dedi C., Diston D., Cheek E., Bowler L., Taylor H., Ebdon J., Jones B.V. Comparative (meta) genomic analysis and ecological profiling of human gut-specific bacteriophage B124-14. PLoS One 2012, 7(4):e35053.
-
(2012)
PLoS One
, vol.7
, Issue.4
-
-
Ogilvie, L.A.1
Caplin, J.2
Dedi, C.3
Diston, D.4
Cheek, E.5
Bowler, L.6
Taylor, H.7
Ebdon, J.8
Jones, B.V.9
-
62
-
-
84884239907
-
Genome signature-based dissection of human gut metagenomes to extract subliminal viral sequences
-
Ogilvie L.A., Bowler L.D., Caplin J., Dedi C., Diston D., Cheek E., Taylor H., Ebdon J.M., Jones B.V. Genome signature-based dissection of human gut metagenomes to extract subliminal viral sequences. Nat. Commun. 2013, 10.1038/ncomms3420.
-
(2013)
Nat. Commun.
-
-
Ogilvie, L.A.1
Bowler, L.D.2
Caplin, J.3
Dedi, C.4
Diston, D.5
Cheek, E.6
Taylor, H.7
Ebdon, J.M.8
Jones, B.V.9
-
63
-
-
25144469473
-
Method for isolation of Bacteroides bacteriophages host strains suitable for tracking sources of faecal pollution in water
-
Payán A., Ebdon J., Taylor H., Gantzer C., Ottoson J., Papageorgiou G.T., Blanch A.R., Lucena F., Jofre J., Muniesa M. Method for isolation of Bacteroides bacteriophages host strains suitable for tracking sources of faecal pollution in water. Appl. Environ. Microbiol. 2005, 71:5659-5662.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 5659-5662
-
-
Payán, A.1
Ebdon, J.2
Taylor, H.3
Gantzer, C.4
Ottoson, J.5
Papageorgiou, G.T.6
Blanch, A.R.7
Lucena, F.8
Jofre, J.9
Muniesa, M.10
-
65
-
-
0035135554
-
Identification of cell wall proteins of Bacteroides fragilis to which bacteriophages B40-8 binds specifically
-
Puig A., Araujo R., Jofre J., Frias-Lopez J. Identification of cell wall proteins of Bacteroides fragilis to which bacteriophages B40-8 binds specifically. Microbiology 2001, 147:281-288.
-
(2001)
Microbiology
, vol.147
, pp. 281-288
-
-
Puig, A.1
Araujo, R.2
Jofre, J.3
Frias-Lopez, J.4
-
66
-
-
0032942011
-
Diversity of Bacteroides fragilis strains in their capacity to recover phages from human and animal wastes and from faecally polluted wastewater
-
Puig A., Queralt N., Jofre J., Araujo R. Diversity of Bacteroides fragilis strains in their capacity to recover phages from human and animal wastes and from faecally polluted wastewater. Appl. Environ. Microbiol. 1999, 65:1772-1776.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 1772-1776
-
-
Puig, A.1
Queralt, N.2
Jofre, J.3
Araujo, R.4
-
67
-
-
0032805564
-
Genomic structure of phage B40-8 of Bacteroides fragilis
-
Puig M., Gironés R. Genomic structure of phage B40-8 of Bacteroides fragilis. Microbiology 1999, 145:1661-1670.
-
(1999)
Microbiology
, vol.145
, pp. 1661-1670
-
-
Puig, M.1
Gironés, R.2
-
68
-
-
0033848652
-
Detection of phage infecting Bacteroides fragilis HSP40 using a specific DNA probe
-
Puig M., Jofre J., Gironés R. Detection of phage infecting Bacteroides fragilis HSP40 using a specific DNA probe. J. Virol. Met. 2000, 88:163-173.
-
(2000)
J. Virol. Met.
, vol.88
, pp. 163-173
-
-
Puig, M.1
Jofre, J.2
Gironés, R.3
-
69
-
-
83455170654
-
Bacteriophages lysis of Enterococcus host strains: a tool for microbial source tracking
-
Purnell S.E., Ebdon J.E., Taylor H.D. Bacteriophages lysis of Enterococcus host strains: a tool for microbial source tracking. Environ. Sci. Technol. 2011, 45:10699-10705.
-
(2011)
Environ. Sci. Technol.
, vol.45
, pp. 10699-10705
-
-
Purnell, S.E.1
Ebdon, J.E.2
Taylor, H.D.3
-
70
-
-
0038521360
-
Homogeneity of the morphological groups of bacteriophages infecting Bacteroides fragilis strain HSP40 and strain RYC2056
-
Queralt N., Jofre J., Araujo R., Muniesa M. Homogeneity of the morphological groups of bacteriophages infecting Bacteroides fragilis strain HSP40 and strain RYC2056. Curr. Microbiol. 2003, 46:163-168.
-
(2003)
Curr. Microbiol.
, vol.46
, pp. 163-168
-
-
Queralt, N.1
Jofre, J.2
Araujo, R.3
Muniesa, M.4
-
71
-
-
84881436427
-
Performance characteristics of qPCR assays targeting human-and ruminant-associated Bacteroidetes for microbial source tracking across sixteen countries on six continents
-
Reischer G.H., Ebdon J.E., Bauer J.M., Schuster N., Ahmed W., Aström J., Blanch A.R., Blöschl G., Byamukama D., Coakley T., Ferguson C., Goshu G., Ko G., de Roda Husman A.M., Mushi D., Poma R., Pradhan B., Rajal V., Schade M.A., Sommer R., Taylor H., Toth E.M., Vrajmasu V., Wuertz S., Mach R.L., Farnleitner A.H. Performance characteristics of qPCR assays targeting human-and ruminant-associated Bacteroidetes for microbial source tracking across sixteen countries on six continents. Environ. Sci. Technol. 2013, 47:8548-8556.
-
(2013)
Environ. Sci. Technol.
, vol.47
, pp. 8548-8556
-
-
Reischer, G.H.1
Ebdon, J.E.2
Bauer, J.M.3
Schuster, N.4
Ahmed, W.5
Aström, J.6
Blanch, A.R.7
Blöschl, G.8
Byamukama, D.9
Coakley, T.10
Ferguson, C.11
Goshu, G.12
Ko, G.13
de Roda Husman, A.M.14
Mushi, D.15
Poma, R.16
Pradhan, B.17
Rajal, V.18
Schade, M.A.19
Sommer, R.20
Taylor, H.21
Toth, E.M.22
Vrajmasu, V.23
Wuertz, S.24
Mach, R.L.25
Farnleitner, A.H.26
more..
-
73
-
-
79961038719
-
Influence of environmental and genetic factors linked to celiac disease risk on infant gut colonization by Bacteroides species
-
Sánchez E., De Palma G., Capilla A., Nova E., Pozo T., Castillejo G., Varea V., Marcos A., Garrote J.A., Polanco I., López A., Ribes-Koninckx C., García-Novo M.D., Calvo C., Ortigosa L., Palau F., Sanz Y. Influence of environmental and genetic factors linked to celiac disease risk on infant gut colonization by Bacteroides species. Appl. Environ. Microbiol. 2001, 77:5316-5323.
-
(2001)
Appl. Environ. Microbiol.
, vol.77
, pp. 5316-5323
-
-
Sánchez, E.1
De Palma, G.2
Capilla, A.3
Nova, E.4
Pozo, T.5
Castillejo, G.6
Varea, V.7
Marcos, A.8
Garrote, J.A.9
Polanco, I.10
López, A.11
Ribes-Koninckx, C.12
García-Novo, M.D.13
Calvo, C.14
Ortigosa, L.15
Palau, F.16
Sanz, Y.17
-
74
-
-
84878873239
-
Evaluation of Enterococcus-infecting phages as indices of fecal pollution
-
Santiago-Rodriguez T.M., Marcos P., Monteiro S., Urdaneta M., Santos R., Toranzos G.A. Evaluation of Enterococcus-infecting phages as indices of fecal pollution. J. Water Health 2013, 11(1):51-63.
-
(2013)
J. Water Health
, vol.11
, Issue.1
, pp. 51-63
-
-
Santiago-Rodriguez, T.M.1
Marcos, P.2
Monteiro, S.3
Urdaneta, M.4
Santos, R.5
Toranzos, G.A.6
-
75
-
-
85077951042
-
Detection of the human specific Bacteroides genetic marker provides evidence of widespread sewage contamination of stormwater in the urban environment
-
Sauer E.P., Bower P.A., Bootsma M.J., McLellan S.L. Detection of the human specific Bacteroides genetic marker provides evidence of widespread sewage contamination of stormwater in the urban environment. Water Res. 2011, 45:2358-2394.
-
(2011)
Water Res.
, vol.45
, pp. 2358-2394
-
-
Sauer, E.P.1
Bower, P.A.2
Bootsma, M.J.3
McLellan, S.L.4
-
76
-
-
0036946650
-
Microbial source tracking: current methodology and future directions
-
Scott T.M., Rose J.B., Jenkins T.M., Farrah S.R., Lukasik J. Microbial source tracking: current methodology and future directions. Appl. Environ. Microbiol. 2002, 68:5796-5803.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 5796-5803
-
-
Scott, T.M.1
Rose, J.B.2
Jenkins, T.M.3
Farrah, S.R.4
Lukasik, J.5
-
77
-
-
79955620831
-
Community structures of faecal bacteria in cattle from different animalfeeding operations
-
Shanks O.C., Kelty C.A., Archibeque S., Jenkins M., Newton R.J., McLellan S.L., Huse S.M., Sogin M.L. Community structures of faecal bacteria in cattle from different animalfeeding operations. Appl. Environ. Microbiol. 2011, 77:2992-3001.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 2992-3001
-
-
Shanks, O.C.1
Kelty, C.A.2
Archibeque, S.3
Jenkins, M.4
Newton, R.J.5
McLellan, S.L.6
Huse, S.M.7
Sogin, M.L.8
-
80
-
-
0032423473
-
Time dose reciprocity in UV disinfection of water
-
Sommer R., Haider T., Cabaj A., Pribil W., Lhotsky M. Time dose reciprocity in UV disinfection of water. Water Sci. Technol. 1998, 12:145-150.
-
(1998)
Water Sci. Technol.
, vol.12
, pp. 145-150
-
-
Sommer, R.1
Haider, T.2
Cabaj, A.3
Pribil, W.4
Lhotsky, M.5
-
81
-
-
0034238188
-
Molecular tracer of organic matter sources to surface water resources
-
Standley L.J., Kaplan L.A., Smith D. Molecular tracer of organic matter sources to surface water resources. Environ. Sci. Technol. 2000, 34:3124-3130.
-
(2000)
Environ. Sci. Technol.
, vol.34
, pp. 3124-3130
-
-
Standley, L.J.1
Kaplan, L.A.2
Smith, D.3
-
82
-
-
84865169354
-
CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome
-
Sters A., Mick E., Tirosh I., Sagy O., Sorek R. CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome. Genome Res. 2013, 22:1944-1985.
-
(2013)
Genome Res.
, vol.22
, pp. 1944-1985
-
-
Sters, A.1
Mick, E.2
Tirosh, I.3
Sagy, O.4
Sorek, R.5
-
83
-
-
6344284400
-
Recommendations for microbial source tracking: lessons from a methods comparison study
-
Stewart J.R., Ellender R.D., Gooch J.A., Jiang S., Myod P., Weisberg S.B. Recommendations for microbial source tracking: lessons from a methods comparison study. J. Water Health 2003, 1:225-231.
-
(2003)
J. Water Health
, vol.1
, pp. 225-231
-
-
Stewart, J.R.1
Ellender, R.D.2
Gooch, J.A.3
Jiang, S.4
Myod, P.5
Weisberg, S.B.6
-
84
-
-
84860427695
-
Persistence of host-associated Bacteroidales gene markers and their quantitative detection in an urban and agricultural mixed prairie watershed
-
Tambalo P.D., Fremaux B., Boat T., Yost C.K. Persistence of host-associated Bacteroidales gene markers and their quantitative detection in an urban and agricultural mixed prairie watershed. Ater Res. 2012, 46:2891-2904.
-
(2012)
Ater Res.
, vol.46
, pp. 2891-2904
-
-
Tambalo, P.D.1
Fremaux, B.2
Boat, T.3
Yost, C.K.4
-
85
-
-
0023378298
-
Bacteriophage active against Bacteroides fragilis in sewage polluted waters
-
Tartera C., Jofre J. Bacteriophage active against Bacteroides fragilis in sewage polluted waters. Appl. Environ. Microbiol. 1987, 53:1632-1637.
-
(1987)
Appl. Environ. Microbiol.
, vol.53
, pp. 1632-1637
-
-
Tartera, C.1
Jofre, J.2
-
86
-
-
0024456386
-
Human origin of Bacteroides fragilis bacteriophages present in the environment
-
Tartera C., Lucena F., Jofre J. Human origin of Bacteroides fragilis bacteriophages present in the environment. Appl. Environ. Microbiol. 1989, 55:2696-2701.
-
(1989)
Appl. Environ. Microbiol.
, vol.55
, pp. 2696-2701
-
-
Tartera, C.1
Lucena, F.2
Jofre, J.3
-
88
-
-
2442616728
-
Temporal stability analysis of the microbiota in human feces by denaturing gradient gel electrophoresis using universal and group-specific 16S rRNA gene primers
-
Vanhoutte T., Huys G., De Barnd E., Swings J. Temporal stability analysis of the microbiota in human feces by denaturing gradient gel electrophoresis using universal and group-specific 16S rRNA gene primers. FEMS Microbiol. Ecol. 2004, 48:437-446.
-
(2004)
FEMS Microbiol. Ecol.
, vol.48
, pp. 437-446
-
-
Vanhoutte, T.1
Huys, G.2
De Barnd, E.3
Swings, J.4
-
89
-
-
1942486000
-
Ecology of prokaryotic viruses
-
Weinbauer M.G. Ecology of prokaryotic viruses. FEMS Microbiol. Rev. 2004, 28:127-181.
-
(2004)
FEMS Microbiol. Rev.
, vol.28
, pp. 127-181
-
-
Weinbauer, M.G.1
-
91
-
-
54149090275
-
-
2004 Update, World Health Organization, Geneva, Switzerland, [WWW document]. URL WHO
-
WHO The Global Burden of Disease 2008, 2004 Update, World Health Organization, Geneva, Switzerland, [WWW document]. URL. http://www.who.int/healthinfo/global_burden_disease/en/.
-
(2008)
The Global Burden of Disease
-
-
-
92
-
-
79954561243
-
Novel Bacteroides host strain for detection of human- and animal-specific bacteriophages in water
-
Wicki M., Auckenthaler A., Felleisen R., Tanner M., Baumgartner A. Novel Bacteroides host strain for detection of human- and animal-specific bacteriophages in water. J. Water Health 2011, 9:159-168.
-
(2011)
J. Water Health
, vol.9
, pp. 159-168
-
-
Wicki, M.1
Auckenthaler, A.2
Felleisen, R.3
Tanner, M.4
Baumgartner, A.5
-
93
-
-
84857233352
-
Library-independent source tracking methods
-
Springer, New York, C. Studies, C. Hagedorn, A.R. Blanch, V.J. Harwood (Eds.)
-
Wuertz S., Wang D., Reischer G.H., Farnleitner A.H. Library-independent source tracking methods. Microbial Source Tracking: Methods, Applications 2011, 61-113. Springer, New York. C. Studies, C. Hagedorn, A.R. Blanch, V.J. Harwood (Eds.).
-
(2011)
Microbial Source Tracking: Methods, Applications
, pp. 61-113
-
-
Wuertz, S.1
Wang, D.2
Reischer, G.H.3
Farnleitner, A.H.4
-
94
-
-
0037470975
-
A genomic view of the human-Bacteroides tethaiotaomicron simbiosis
-
Xu J., Bjursell M.K., Himrod J., Deng S., Carmichael L.K., Chiang H.C., Hooper L.V., Gordon J.I. A genomic view of the human-Bacteroides tethaiotaomicron simbiosis. Science 2003, 299:2074-2076.
-
(2003)
Science
, vol.299
, pp. 2074-2076
-
-
Xu, J.1
Bjursell, M.K.2
Himrod, J.3
Deng, S.4
Carmichael, L.K.5
Chiang, H.C.6
Hooper, L.V.7
Gordon, J.I.8
|