메뉴 건너뛰기




Volumn 105, Issue 3, 2014, Pages 571-578

Roseovarius azorensis sp. nov., isolated from seawater at Espalamaca, Azores

Author keywords

Espalamaca; Polyphasic taxonomy; Roseovarius azorensis sp. nov; Seawater

Indexed keywords

AZORES; FATTY ACIDS; MOLECULAR SEQUENCE DATA; PHENOTYPE; PHYLOGENY; RHODOBACTERACEAE; RNA, RIBOSOMAL, 16S; SEAWATER; WATER MICROBIOLOGY;

EID: 84894228041     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-013-0109-9     Document Type: Article
Times cited : (22)

References (34)
  • 1
    • 27844511925 scopus 로고    scopus 로고
    • Roseovarius mucosus sp. nov., a member of the Roseobacter clade with trace amounts of bacteriochlorophyll a
    • 1:CAS:528:DC%2BD2MXhtlWhtLrI 16280500 10.1099/ijs.0.63832-0
    • Biebl H, Allgaier M, Lunsdorf H, Pukall R, Tindall BJ, Wagner-Dobler I (2005) Roseovarius mucosus sp. nov., a member of the Roseobacter clade with trace amounts of bacteriochlorophyll a. Int J Syst Evol Microbiol 55:2377-2383
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 2377-2383
    • Biebl, H.1    Allgaier, M.2    Lunsdorf, H.3    Pukall, R.4    Tindall, B.J.5    Wagner-Dobler, I.6
  • 2
    • 22544441169 scopus 로고    scopus 로고
    • Roseovarius crassostreae sp. nov., a member of the Roseobacter clade and the apparent cause of juvenile oyster disease (JOD) in cultured Eastern oysters
    • 1:CAS:528:DC%2BD2MXovV2nsbg%3D 16014477 10.1099/ijs.0.63620-0
    • Boettcher KJ, Geaghan KK, Maloy AP, Barber BJ (2005) Roseovarius crassostreae sp. nov., a member of the Roseobacter clade and the apparent cause of juvenile oyster disease (JOD) in cultured Eastern oysters. Int J Syst Evol Microbiol 55:1531-1537
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1531-1537
    • Boettcher, K.J.1    Geaghan, K.K.2    Maloy, A.P.3    Barber, B.J.4
  • 4
    • 0019305403 scopus 로고
    • Fatty acid, isoprenoid quinone and polar lipid composition in the classification of Curtobacterium and related taxa
    • 1:CAS:528:DyaL3cXlt1yntrk%3D 6775048
    • Collins MD, Goodfellow M, Minnikin DE (1980) Fatty acid, isoprenoid quinone and polar lipid composition in the classification of Curtobacterium and related taxa. J Gen Microbiol 118:29-37
    • (1980) J Gen Microbiol , vol.118 , pp. 29-37
    • Collins, M.D.1    Goodfellow, M.2    Minnikin, D.E.3
  • 5
    • 84885227083 scopus 로고    scopus 로고
    • Roseovarius lutimaris sp. nov., isolated from a marine tidal flat
    • 1:CAS:528:DC%2BC3sXhvFegurbM 23687056 10.1099/ijs.0.050807-0
    • Choi EJ, Lee HJ, Kim JM, Jeon CO (2013) Roseovarius lutimaris sp. nov., isolated from a marine tidal flat. Int J Syst Evol Microbiol 63:3835-3840
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 3835-3840
    • Choi, E.J.1    Lee, H.J.2    Kim, J.M.3    Jeon, C.O.4
  • 6
    • 0032189023 scopus 로고    scopus 로고
    • Microbial diversity in a hydrocarbon and chlorinated-solvent-contaminated aquifer undergoing intrinsic bioremediation
    • 1:CAS:528:DyaK1cXms1entb4%3D 106571 9758812
    • Dojka MA, Hugenholtz P, Haack SK, Pace NR (1998) Microbial diversity in a hydrocarbon and chlorinated-solvent-contaminated aquifer undergoing intrinsic bioremediation. Appl Environ Microbiol 64:3869-3877
    • (1998) Appl Environ Microbiol , vol.64 , pp. 3869-3877
    • Dojka, M.A.1    Hugenholtz, P.2    Haack, S.K.3    Pace, N.R.4
  • 7
    • 77955556892 scopus 로고    scopus 로고
    • The genera Vibrio and Photobacterium
    • M. Dworkin S. Falkow E. Rosenberg K.H. Schleifer E. Stackebrandt (eds) 3 Springer New York
    • Farmer JJ, Hickman-Brenner FW (2006) The genera Vibrio and Photobacterium. In: Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E (eds) The prokaryotes, a handbook on the biology of bacteria, 3rd edn. Springer, New York, pp 508-563
    • (2006) The Prokaryotes, A Handbook on the Biology of Bacteria , pp. 508-563
    • Farmer, J.J.1    Hickman-Brenner, F.W.2
  • 8
    • 0000461280 scopus 로고
    • Conference limits on phylogenies: An approach using the bootstrap
    • 10.2307/2408678
    • Felsenstein J (1985) Conference limits on phylogenies: an approach using the bootstrap. Evolution 39:783-789
    • (1985) Evolution , vol.39 , pp. 783-789
    • Felsenstein, J.1
  • 9
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for specified tree topology
    • 10.2307/2412116
    • Fitch WM (1971) Toward defining the course of evolution: minimum change for specified tree topology. Syst Zool 20:406-416
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 12
    • 79951633297 scopus 로고    scopus 로고
    • Roseovarius marinus sp. nov., isolated from seawater
    • 1:CAS:528:DC%2BC3MXkt1Sitbw%3D 20348324 10.1099/ijs.0.019828-0
    • Jung YT, Lee JS, Oh KH, Oh TK, Yoon JH (2011) Roseovarius marinus sp. nov., isolated from seawater. Int J Syst Evol Microbiol 61:427-432
    • (2011) Int J Syst Evol Microbiol , vol.61 , pp. 427-432
    • Jung, Y.T.1    Lee, J.S.2    Oh, K.H.3    Oh, T.K.4    Yoon, J.H.5
  • 13
    • 84862847376 scopus 로고    scopus 로고
    • Roseovarius litoreus sp. nov., isolated from seawater of southern coast of Korean peninsula
    • 1:CAS:528:DC%2BC38XntFWqt7Y%3D 22430766 10.1007/s10482-012-9721-3
    • Jung YT, Park S, Yoon JH (2012) Roseovarius litoreus sp. nov., isolated from seawater of southern coast of Korean peninsula. Antonie Van Leeuwenhoek 102:141-148
    • (2012) Antonie Van Leeuwenhoek , vol.102 , pp. 141-148
    • Jung, Y.T.1    Park, S.2    Yoon, J.H.3
  • 14
    • 82955187660 scopus 로고    scopus 로고
    • Phylogenetic diversity of carbohydrate degrading culturable bacteria from Mandovi and Zuari estuaries, Goa, west coast of India
    • 1:CAS:528:DC%2BC3MXhsFahsrzL 10.1016/j.ecss.2011.09.004
    • Khandeparker R, Verma P, Meena RM, Deobagkar DD (2011) Phylogenetic diversity of carbohydrate degrading culturable bacteria from Mandovi and Zuari estuaries, Goa, west coast of India. Estuar Coast Shelf Sci 95:359-366
    • (2011) Estuar Coast Shelf Sci , vol.95 , pp. 359-366
    • Khandeparker, R.1    Verma, P.2    Meena, R.M.3    Deobagkar, D.D.4
  • 17
    • 0032908226 scopus 로고    scopus 로고
    • Roseovarius tolerans gen. nov., sp. nov., a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake
    • 1:CAS:528:DyaK1MXosF2nuw%3D%3D 10028255 10.1099/00207713-49-1-137
    • Labrenz M, Collins MD, Lawson PA, Tindall BJ, Schumann P, Hirsch P (1999) Roseovarius tolerans gen. nov., sp. nov., a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake. Int J Syst Bacteriol 49:137-147
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 137-147
    • Labrenz, M.1    Collins, M.D.2    Lawson, P.A.3    Tindall, B.J.4    Schumann, P.5    Hirsch, P.6
  • 19
    • 84882253789 scopus 로고    scopus 로고
    • Roseovarius marisflavi sp. nov., isolated from an amphioxus breeding zone in the coastal region of the Yellow Sea, China
    • 1:CAS:528:DC%2BC3sXht1yiurbE 23828179 10.1007/s10482-013-9965-6
    • Li Z, Zhao R, Ji S, Shi X, Zhang XH (2013) Roseovarius marisflavi sp. nov., isolated from an amphioxus breeding zone in the coastal region of the Yellow Sea, China. Antonie Van Leeuwenhoek 104:413-421
    • (2013) Antonie Van Leeuwenhoek , vol.104 , pp. 413-421
    • Li, Z.1    Zhao, R.2    Ji, S.3    Shi, X.4    Zhang, X.H.5
  • 20
    • 0000198211 scopus 로고
    • Precise measurement of the G + C content of deoxyribonucleic acid by high-performance liquid chromatography
    • 1:CAS:528:DyaL1MXltFWku7o%3D 10.1099/00207713-39-2-159
    • Mesbah M, Premachandran U, Whitman WB (1989) Precise measurement of the G + C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159-167
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 23
    • 84877849068 scopus 로고    scopus 로고
    • Roseovarius sediminilitoris sp. nov., isolated from seashore sediment
    • 1:CAS:528:DC%2BC3sXhtFOitrjL 22941298 10.1099/ijs.0.043737-0
    • Park S, Yoon JH (2013) Roseovarius sediminilitoris sp. nov., isolated from seashore sediment. Int J Syst Evol Microbiol 63:1741-1745
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 1741-1745
    • Park, S.1    Yoon, J.H.2
  • 24
    • 0023375195 scopus 로고
    • The neighbour-joining method: A new method for reconstructing phylogenetic trees
    • 1:STN:280:DyaL1c7ovFSjsA%3D%3D 3447015
    • Saitou N, Nei M (1987) The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 25
    • 0001859086 scopus 로고
    • Identification of bacteria by gas chromatography of cellular fatty acids
    • MIDI, Newark, DE
    • Sasser M (1990) Identification of bacteria by gas chromatography of cellular fatty acids. MIDI technical note 101. MIDI, Newark, DE
    • (1990) MIDI Technical Note , vol.101
    • Sasser, M.1
  • 26
    • 0018674967 scopus 로고
    • Distribution of aerobic bacteria which contain bacteriochlorophyll a
    • 1:CAS:528:DyaE1MXlt1Sjs7s%3D 243433 16345414
    • Shiba T, Simidu U, Taga N (1979) Distribution of aerobic bacteria which contain bacteriochlorophyll a. Appl Environ Microbiol 38(1):43-45
    • (1979) Appl Environ Microbiol , vol.38 , Issue.1 , pp. 43-45
    • Shiba, T.1    Simidu, U.2    Taga, N.3
  • 27
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • Gerhardt R.G.E. Murray W.A. Wood N.R. Krieg (eds) American Society for Microbiology Washington, DC
    • Smibert RM, Krieg NR (1994) Phenotypic characterization. In: Gerhardt P, Murray RGE, Wood WA, Krieg NR (eds) Methods for general and molecular bacteriology. American Society for Microbiology, Washington, DC, pp 607-654
    • (1994) Methods for General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 28
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • 1:CAS:528:DyaK2MXitFCnsb4%3D 10.1099/00207713-44-4-846
    • Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846-849
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 29
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • 1:CAS:528:DC%2BC3MXht1eiu73K 21546353 10.1093/molbev/msr121
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731-2739
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 30
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • 1:CAS:528:DyaK2MXitlSgu74%3D 308517 7984417 10.1093/nar/22.22.4673
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 31
    • 77953313120 scopus 로고    scopus 로고
    • Roseovarius nanhaiticus sp. nov., a member of the Roseobacter clade isolated from marine sediment
    • 1:CAS:528:DC%2BC3cXpsFSqtbY%3D 19667376 10.1099/ijs.0.012930-0
    • Wang B, Sun F, Lai Q, Du Y, Liu X, Li G, Luo J, Shao Z (2010) Roseovarius nanhaiticus sp. nov., a member of the Roseobacter clade isolated from marine sediment. Int J Syst Evol Microbiol 60:1289-1295
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 1289-1295
    • Wang, B.1    Sun, F.2    Lai, Q.3    Du, Y.4    Liu, X.5    Li, G.6    Luo, J.7    Shao, Z.8
  • 32
    • 67649824107 scopus 로고    scopus 로고
    • Roseovarius pacificus sp. nov., isolated from deep-sea sediment
    • 1:CAS:528:DC%2BD1MXms1Gltrs%3D 19406803 10.1099/ijs.0.002477-0
    • Wang B, Tan T, Shao Z (2009) Roseovarius pacificus sp. nov., isolated from deep-sea sediment. Int J Syst Evol Microbiol 59:1116-1121
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1116-1121
    • Wang, B.1    Tan, T.2    Shao, Z.3
  • 33
    • 47049088165 scopus 로고    scopus 로고
    • Roseovarius aestuarii sp. nov., isolated from a tidal flat of the Yellow Sea in Korea
    • 1:CAS:528:DC%2BD1cXns1amt7k%3D 18450713 10.1099/ijs.0.65657-0
    • Yoon JH, Kang SJ, Oh TK (2008) Roseovarius aestuarii sp. nov., isolated from a tidal flat of the Yellow Sea in Korea. Int J Syst Evol Microbiol 58:1198-1202
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1198-1202
    • Yoon, J.H.1    Kang, S.J.2    Oh, T.K.3
  • 34
    • 9744272402 scopus 로고    scopus 로고
    • Porphyrobacter donghaensis sp. nov., isolated from sea water of the East Sea in Korea
    • 1:CAS:528:DC%2BD2cXhtFGjsL%2FN 15545463 10.1099/ijs.0.63226-0
    • Yoon JH, Lee MH, Oh TK (2004) Porphyrobacter donghaensis sp. nov., isolated from sea water of the East Sea in Korea. Int J Syst Evol Microbiol 54:2231-2235
    • (2004) Int J Syst Evol Microbiol , vol.54 , pp. 2231-2235
    • Yoon, J.H.1    Lee, M.H.2    Oh, T.K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.