메뉴 건너뛰기




Volumn 89, Issue , 2014, Pages 58-66

Characterization of hydrocarbon-degrading bacteria isolated from oil-contaminated sediments in the Sultanate of Oman and evaluation of bioaugmentation and biostimulation approaches in microcosm experiments

Author keywords

16S rRNA; Alkanes; Bacterial consortia; Bioaugmentation; Bioremediation; Nutrients

Indexed keywords


EID: 84893838768     PISSN: 09648305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ibiod.2014.01.006     Document Type: Article
Times cited : (83)

References (57)
  • 1
    • 0035194375 scopus 로고    scopus 로고
    • Long-term compositional changes after transplant in a microbial mat cyanobacterial community revealed using a polyphasic approach
    • Abed R.M.M., Garcia-Pichel F. Long-term compositional changes after transplant in a microbial mat cyanobacterial community revealed using a polyphasic approach. Environ. Microbiol. 2001, 3:53-62.
    • (2001) Environ. Microbiol. , vol.3 , pp. 53-62
    • Abed, R.M.M.1    Garcia-Pichel, F.2
  • 2
    • 34248383663 scopus 로고    scopus 로고
    • Phylogenetic diversity and activity of aerobic heterotrophic bacteria from a hypersaline oil-polluted microbial mat
    • Abed R.M.M., Zein B., Al-Thukair A., de Beer D. Phylogenetic diversity and activity of aerobic heterotrophic bacteria from a hypersaline oil-polluted microbial mat. Syst. Appl. Microbiol. 2007, 30:319-330.
    • (2007) Syst. Appl. Microbiol. , vol.30 , pp. 319-330
    • Abed, R.M.M.1    Zein, B.2    Al-Thukair, A.3    de Beer, D.4
  • 3
    • 35348926280 scopus 로고    scopus 로고
    • Alkaliphilic and halophilic hydrocarbon-utilizing bacteria from Kuwaiti coasts of the Arabian Gulf
    • Al-Awadhi H., Sulaiman R.H.D., Mahmoud H.M., Radwan S.S. Alkaliphilic and halophilic hydrocarbon-utilizing bacteria from Kuwaiti coasts of the Arabian Gulf. Appl. Microbiol. Biotechnol. 2007, 77:183-186.
    • (2007) Appl. Microbiol. Biotechnol. , vol.77 , pp. 183-186
    • Al-Awadhi, H.1    Sulaiman, R.H.D.2    Mahmoud, H.M.3    Radwan, S.S.4
  • 5
    • 0015333841 scopus 로고
    • Degradation and mineralization of petroleum by two bacterial isolates from coastal waters
    • Atlas R.M., Bartha R. Degradation and mineralization of petroleum by two bacterial isolates from coastal waters. Biotechnol. Bioeng. 1972, 14:297-308.
    • (1972) Biotechnol. Bioeng. , vol.14 , pp. 297-308
    • Atlas, R.M.1    Bartha, R.2
  • 6
    • 0015337078 scopus 로고
    • Degradation and mineralization of petroleum in sea water: limitation by nitrogen and phosphorus
    • Atlas R.M., Bartha R. Degradation and mineralization of petroleum in sea water: limitation by nitrogen and phosphorus. Biotechnol. Bioeng. 1972, 14:309-318.
    • (1972) Biotechnol. Bioeng. , vol.14 , pp. 309-318
    • Atlas, R.M.1    Bartha, R.2
  • 7
    • 12844274394 scopus 로고    scopus 로고
    • Comparative bioremediation of soils contaminated with diesel oil by natural attenuation, biostimulation, and bioaugmentation
    • Bento F.M., Camargo F.A.O., Okeke B.C., Frankenberger W.T. Comparative bioremediation of soils contaminated with diesel oil by natural attenuation, biostimulation, and bioaugmentation. Bioresour. Technol. 2005, 96:1049-1055.
    • (2005) Bioresour. Technol. , vol.96 , pp. 1049-1055
    • Bento, F.M.1    Camargo, F.A.O.2    Okeke, B.C.3    Frankenberger, W.T.4
  • 9
    • 0028183819 scopus 로고
    • Effectiveness of bioremediation for the Exxon Valdez oil spill
    • Bragg G.R., Prince R.C., Harner E.J., Atlas R.M. Effectiveness of bioremediation for the Exxon Valdez oil spill. Nature 1994, 368:413-418.
    • (1994) Nature , vol.368 , pp. 413-418
    • Bragg, G.R.1    Prince, R.C.2    Harner, E.J.3    Atlas, R.M.4
  • 11
    • 84868276811 scopus 로고    scopus 로고
    • Role of natural attenuation, phytoremediation and hybrid technologies in the remediation of a refinery soil with old/recent petroleum hydrocarbons contamination
    • Couto M.N.P.F.S., Pinto D., Basto M.C.P., Vasconcelos T.S.D. Role of natural attenuation, phytoremediation and hybrid technologies in the remediation of a refinery soil with old/recent petroleum hydrocarbons contamination. Environ. Technol. 2012, 33:2097-2104.
    • (2012) Environ. Technol. , vol.33 , pp. 2097-2104
    • Couto, M.N.P.F.S.1    Pinto, D.2    Basto, M.C.P.3    Vasconcelos, T.S.D.4
  • 12
    • 67349112111 scopus 로고    scopus 로고
    • Isolation, biodegradation ability and molecular detection of hydrocarbon degrading bacteria in petroleum samples from a Brazilian offshore basin
    • de Vasconcellos S.P., Crespim E., Cruz G.F.da, Senatore D.B., Simioni K.C.M., Neto E.V.dos, Marsaioli A.J., Oliveira V.M.de Isolation, biodegradation ability and molecular detection of hydrocarbon degrading bacteria in petroleum samples from a Brazilian offshore basin. Org. Geochem. 2009, 40:574-588.
    • (2009) Org. Geochem. , vol.40 , pp. 574-588
    • de Vasconcellos, S.P.1    Crespim, E.2    Cruz, G.3    Senatore, D.B.4    Simioni, K.C.M.5    Neto, E.6    Marsaioli, A.J.7    Oliveira, V.8
  • 13
    • 0034947785 scopus 로고    scopus 로고
    • Influence of n-alkane and petroleum of fatty acid composition of a hydrocarbonoclasticus bacterium: Marinobacter hydrocarbonoclasticus strain 617
    • Doumenq P., Aries E., Asia L., Acquaviva M., Artaud J., Gilewicz M., Mille G., Bertrand J.C. Influence of n-alkane and petroleum of fatty acid composition of a hydrocarbonoclasticus bacterium: Marinobacter hydrocarbonoclasticus strain 617. Chemosphere 2001, 44:519-528.
    • (2001) Chemosphere , vol.44 , pp. 519-528
    • Doumenq, P.1    Aries, E.2    Asia, L.3    Acquaviva, M.4    Artaud, J.5    Gilewicz, M.6    Mille, G.7    Bertrand, J.C.8
  • 14
    • 0342723204 scopus 로고
    • Removal of pentachlorophenol from soil by Arthrobacter strain ATCC 33790
    • Battelle Press, Columbus, R.E. Hinchee, J. Fredrickson, B.C. Alleman (Eds.)
    • Edgehill R.U. Removal of pentachlorophenol from soil by Arthrobacter strain ATCC 33790. Bioaugmentation for Site Remediation 1995, 85-90. Battelle Press, Columbus. R.E. Hinchee, J. Fredrickson, B.C. Alleman (Eds.).
    • (1995) Bioaugmentation for Site Remediation , pp. 85-90
    • Edgehill, R.U.1
  • 16
  • 17
    • 0033153161 scopus 로고    scopus 로고
    • Bioremediation of petroleum hydrocarbon contaminants in marine habitats
    • Head I.M., Swannell R.P.J. Bioremediation of petroleum hydrocarbon contaminants in marine habitats. Curr. Opin. Biotechnol. 1999, 10:234-239.
    • (1999) Curr. Opin. Biotechnol. , vol.10 , pp. 234-239
    • Head, I.M.1    Swannell, R.P.J.2
  • 18
    • 0002594949 scopus 로고
    • Interspecies hydrogen transfer in co-cultures of methanol-utilizing acidogens and sulfate-reducing or methanogenic bacteria
    • Heijthuijsen J., Hansen T.A. Interspecies hydrogen transfer in co-cultures of methanol-utilizing acidogens and sulfate-reducing or methanogenic bacteria. FEMS Microbiol. Ecol. 1986, 38:57-64.
    • (1986) FEMS Microbiol. Ecol. , vol.38 , pp. 57-64
    • Heijthuijsen, J.1    Hansen, T.A.2
  • 19
    • 0032935779 scopus 로고    scopus 로고
    • Marinobacter aquaeolei sp. nov., a halophilic bacterium isolated from a Vietnamese oil producing well
    • Huu N.B., Denner E.B.M., Ha D.T.C., Wanner G., Stan-Lotter H. Marinobacter aquaeolei sp. nov., a halophilic bacterium isolated from a Vietnamese oil producing well. Int. J. Syst. Bacteriol. 1999, 49:367-375.
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 367-375
    • Huu, N.B.1    Denner, E.B.M.2    Ha, D.T.C.3    Wanner, G.4    Stan-Lotter, H.5
  • 20
    • 0000860563 scopus 로고    scopus 로고
    • Ion chromatography in environmental analysis
    • John Wiley & Sons Ltd., Chichester, R.A. Meyers (Ed.)
    • Jackson P.E. Ion chromatography in environmental analysis. Encyclopedia of Analytical Chemistry 2000, 2779-2801. John Wiley & Sons Ltd., Chichester. R.A. Meyers (Ed.).
    • (2000) Encyclopedia of Analytical Chemistry , pp. 2779-2801
    • Jackson, P.E.1
  • 21
    • 79960715769 scopus 로고    scopus 로고
    • Polyphasic approach for assessing changes in an autochthonous marine bacterial community in the presence pf prestige fuel oil and its biodegradation potential
    • Jimenez N., Vinas M., Guiu-Aragones C., Bayona J.M., Albaiges J., Solanas A.M. Polyphasic approach for assessing changes in an autochthonous marine bacterial community in the presence pf prestige fuel oil and its biodegradation potential. Appl. Microbiol. Biotechnol. 2011, 91:823-834.
    • (2011) Appl. Microbiol. Biotechnol. , vol.91 , pp. 823-834
    • Jimenez, N.1    Vinas, M.2    Guiu-Aragones, C.3    Bayona, J.M.4    Albaiges, J.5    Solanas, A.M.6
  • 22
    • 0031865126 scopus 로고    scopus 로고
    • Practical applications of marine bioremediation
    • Jones W.R. Practical applications of marine bioremediation. Curr. Opin. Biotechnol. 1998, 9:300-304.
    • (1998) Curr. Opin. Biotechnol. , vol.9 , pp. 300-304
    • Jones, W.R.1
  • 23
    • 0035208305 scopus 로고    scopus 로고
    • Molecular detection of marine bacterial populations on beaches contaminated by Nakhodka tanker oil-spill accident
    • Kasai Y., Kishira H., Syutsubo K., Harayama S. Molecular detection of marine bacterial populations on beaches contaminated by Nakhodka tanker oil-spill accident. Environ. Microbiol. 2001, 3:1-10.
    • (2001) Environ. Microbiol. , vol.3 , pp. 1-10
    • Kasai, Y.1    Kishira, H.2    Syutsubo, K.3    Harayama, S.4
  • 24
    • 79951576601 scopus 로고    scopus 로고
    • Enhancing bioremediation of diesel fuel-contaminated soil in a boreal climate: comparison of biostimulation and bioaugmentation
    • Kauppi S., Sinkkonen A., Romantschuk M. Enhancing bioremediation of diesel fuel-contaminated soil in a boreal climate: comparison of biostimulation and bioaugmentation. Int. Biodeterior. Biodegrad. 2011, 65:359-368.
    • (2011) Int. Biodeterior. Biodegrad. , vol.65 , pp. 359-368
    • Kauppi, S.1    Sinkkonen, A.2    Romantschuk, M.3
  • 25
    • 16244371776 scopus 로고    scopus 로고
    • Evaluation of bioremediation effectiveness on crude oil-contaminated sand
    • Kim S.-J., Choi D.H., Sim D.S., Oh Y.-S. Evaluation of bioremediation effectiveness on crude oil-contaminated sand. Chemosphere 2005, 59:845-852.
    • (2005) Chemosphere , vol.59 , pp. 845-852
    • Kim, S.-J.1    Choi, D.H.2    Sim, D.S.3    Oh, Y.-S.4
  • 27
    • 0032765667 scopus 로고    scopus 로고
    • Effect of a mixed culture on co-oxidation during the degradation of saturated hydrocarbon mixture
    • Ko S.H., Lebeault L. Effect of a mixed culture on co-oxidation during the degradation of saturated hydrocarbon mixture. J.Appl. Microbiol. 1999, 87:72-79.
    • (1999) J.Appl. Microbiol. , vol.87 , pp. 72-79
    • Ko, S.H.1    Lebeault, L.2
  • 28
    • 0007857629 scopus 로고    scopus 로고
    • Bioremediation of oil on shoreline environments: development of techniques and guidelines
    • Lee K., Merlin F.X. Bioremediation of oil on shoreline environments: development of techniques and guidelines. Pure Appl. Chem. 1999, 71:161-171.
    • (1999) Pure Appl. Chem. , vol.71 , pp. 161-171
    • Lee, K.1    Merlin, F.X.2
  • 29
    • 0017800467 scopus 로고
    • Apreliminary study on growth yields in relation to the carbon and energy content of various organic growth substrates
    • Linton J.D., Stephenson R.J. Apreliminary study on growth yields in relation to the carbon and energy content of various organic growth substrates. FEMS Microbiol. Lett. 1978, 3:95-98.
    • (1978) FEMS Microbiol. Lett. , vol.3 , pp. 95-98
    • Linton, J.D.1    Stephenson, R.J.2
  • 31
    • 0034840415 scopus 로고    scopus 로고
    • Biodegradation and bioremediation of hydrocarbons in extreme environments
    • Margesin R., Schinner F. Biodegradation and bioremediation of hydrocarbons in extreme environments. Appl. Microbiol. Biotechnol. 2001, 56:650-663.
    • (2001) Appl. Microbiol. Biotechnol. , vol.56 , pp. 650-663
    • Margesin, R.1    Schinner, F.2
  • 32
    • 0031545629 scopus 로고    scopus 로고
    • Cleaning oil shores: putting bioremediation to the test
    • Mearns A.J. Cleaning oil shores: putting bioremediation to the test. Spill Sci. Technol. Bull. 1997, 4:209-217.
    • (1997) Spill Sci. Technol. Bull. , vol.4 , pp. 209-217
    • Mearns, A.J.1
  • 33
    • 77953268043 scopus 로고    scopus 로고
    • Biodegradation of oil refinery residues using mixed-cultures of microorganisms isolated from a landfarming
    • Morais E.B., Tauk-Tornisielo S.M. Biodegradation of oil refinery residues using mixed-cultures of microorganisms isolated from a landfarming. Braz. Arch. Biol. Technol. 2009, 52:1571-1578.
    • (2009) Braz. Arch. Biol. Technol. , vol.52 , pp. 1571-1578
    • Morais, E.B.1    Tauk-Tornisielo, S.M.2
  • 34
    • 0029097821 scopus 로고
    • Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments
    • Muyzer G., Teske A., Wirsen C.O., Jannasch H.W. Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments. Arch. Microbiol. 1995, 164:165-172.
    • (1995) Arch. Microbiol. , vol.164 , pp. 165-172
    • Muyzer, G.1    Teske, A.2    Wirsen, C.O.3    Jannasch, H.W.4
  • 40
    • 0004791104 scopus 로고
    • Biodegradation of trinitrotoluene (TNT) by a strain of Clostridium bifermentans
    • Battelle Press, Columbus, R.E. Hinchee, J. Fredrickson, B.C. Alleman (Eds.)
    • Shin C.Y., Crawford D.L. Biodegradation of trinitrotoluene (TNT) by a strain of Clostridium bifermentans. Bioaugmentation for Site Remediation 1995, 57-69. Battelle Press, Columbus. R.E. Hinchee, J. Fredrickson, B.C. Alleman (Eds.).
    • (1995) Bioaugmentation for Site Remediation , pp. 57-69
    • Shin, C.Y.1    Crawford, D.L.2
  • 41
    • 26244452974 scopus 로고    scopus 로고
    • Genomovars 11 to 18 of Pseudomonas stutzeri, identified among isolates from soil and marine sediment
    • Sikorski J., Lalucat J., Wackernagel W. Genomovars 11 to 18 of Pseudomonas stutzeri, identified among isolates from soil and marine sediment. Int. J. Syst. Evol. Microbiol. 2005, 55:1767-1770.
    • (2005) Int. J. Syst. Evol. Microbiol. , vol.55 , pp. 1767-1770
    • Sikorski, J.1    Lalucat, J.2    Wackernagel, W.3
  • 42
    • 33846613087 scopus 로고    scopus 로고
    • Hydrocarbon concentrations in two intertidal areas of Saudi Arabia following remediation with mechanical clean-up techniques after Gulf War oil spill
    • Riyad and Senckenberg research institute, Frankfurt, F. Krupp, A.H. Abuzinada, I.A. Nader (Eds.)
    • Smith G.C. Hydrocarbon concentrations in two intertidal areas of Saudi Arabia following remediation with mechanical clean-up techniques after Gulf War oil spill. AMarine Wildlife Sanctuary for the Arabian Gulf: Environmental Research and Conservation Following the 1991 Gulf War Oil Spill 1996, 85-95. Riyad and Senckenberg research institute, Frankfurt. F. Krupp, A.H. Abuzinada, I.A. Nader (Eds.).
    • (1996) AMarine Wildlife Sanctuary for the Arabian Gulf: Environmental Research and Conservation Following the 1991 Gulf War Oil Spill , pp. 85-95
    • Smith, G.C.1
  • 43
    • 0029973076 scopus 로고    scopus 로고
    • Field evaluation of marine oil spill bioremediation
    • Swannell R.P.J., Lee K., McDonagh M. Field evaluation of marine oil spill bioremediation. Microbiol. Rev. 1996, 60:342-365.
    • (1996) Microbiol. Rev. , vol.60 , pp. 342-365
    • Swannell, R.P.J.1    Lee, K.2    McDonagh, M.3
  • 44
    • 0035210375 scopus 로고    scopus 로고
    • Development of specific oligonucleotide probes for the identification and in situ detection of hydrocarbon-degrading Alcanivorax strains
    • Syutsubo K., Kishira H., Harayama S. Development of specific oligonucleotide probes for the identification and in situ detection of hydrocarbon-degrading Alcanivorax strains. Environ. Microbiol. 2001, 3:371-379.
    • (2001) Environ. Microbiol. , vol.3 , pp. 371-379
    • Syutsubo, K.1    Kishira, H.2    Harayama, S.3
  • 45
    • 14644422261 scopus 로고    scopus 로고
    • Marinobacter alkaliphilus sp. nov., a novel alkaliphilic bacterium isolated from subseafloor serpentine mud from Ocean Drilling Program Site 1200 at South Chamorro Seamount, Mariana Forearc
    • Takai K., Moyer C.L., Miyazaki M., Nogi Y., Nealson H.H.K.H., Horikoshi K. Marinobacter alkaliphilus sp. nov., a novel alkaliphilic bacterium isolated from subseafloor serpentine mud from Ocean Drilling Program Site 1200 at South Chamorro Seamount, Mariana Forearc. Extremophiles 2005, 9:17-27.
    • (2005) Extremophiles , vol.9 , pp. 17-27
    • Takai, K.1    Moyer, C.L.2    Miyazaki, M.3    Nogi, Y.4    Nealson, H.H.K.H.5    Horikoshi, K.6
  • 46
    • 84856077165 scopus 로고    scopus 로고
    • Aging effect of petroleum hydrocarbons in soil under different attenuation conditions
    • Tang J., Lu X., Sun Q., Zhu W. Aging effect of petroleum hydrocarbons in soil under different attenuation conditions. Agric. Ecosyst. Environ. 2012, 149:109-117.
    • (2012) Agric. Ecosyst. Environ. , vol.149 , pp. 109-117
    • Tang, J.1    Lu, X.2    Sun, Q.3    Zhu, W.4
  • 48
    • 0032795933 scopus 로고    scopus 로고
    • Bacteria designed for bioremediation
    • Timmis K.N., Pieper D.H. Bacteria designed for bioremediation. Trends Biotechnol. 1999, 17:201-204.
    • (1999) Trends Biotechnol. , vol.17 , pp. 201-204
    • Timmis, K.N.1    Pieper, D.H.2
  • 49
    • 77954405374 scopus 로고    scopus 로고
    • Microbial community structure of a heavy fuel oil-degrading marine consortium: linking microbial dynamics with polycyclic aromatic hydrocarbon utilization
    • Vila J., Nieto J.M., Mertens J., Springael D., Grifoll M. Microbial community structure of a heavy fuel oil-degrading marine consortium: linking microbial dynamics with polycyclic aromatic hydrocarbon utilization. FEMS Microbiol. Ecol. 2010, 73:349-362.
    • (2010) FEMS Microbiol. Ecol. , vol.73 , pp. 349-362
    • Vila, J.1    Nieto, J.M.2    Mertens, J.3    Springael, D.4    Grifoll, M.5
  • 50
    • 0029973418 scopus 로고    scopus 로고
    • Bioaugmentation as a soil bioremediation approach
    • Vogel T.M. Bioaugmentation as a soil bioremediation approach. Curr. Opin. Biotechnol. 1996, 7(3):311-316.
    • (1996) Curr. Opin. Biotechnol. , vol.7 , Issue.3 , pp. 311-316
    • Vogel, T.M.1
  • 51
    • 0017809515 scopus 로고
    • Hydrocarbon biodegradation in hypersaline environments
    • Ward D.M., Brock T.D. Hydrocarbon biodegradation in hypersaline environments. Appl. Environ. Microbiol. 1978, 35:353-359.
    • (1978) Appl. Environ. Microbiol. , vol.35 , pp. 353-359
    • Ward, D.M.1    Brock, T.D.2
  • 53
    • 0001614970 scopus 로고
    • Gram-negative mesophilic sulfate-reducing bacteria
    • Springer-Verlag, New York, A. Balows, H.G. Trüper, M. Dworkin, W. Harder, K.H. Schleifer (Eds.)
    • Widdel F., Bak F. Gram-negative mesophilic sulfate-reducing bacteria. The Prokaryotes 1992, 3353-3378. Springer-Verlag, New York. A. Balows, H.G. Trüper, M. Dworkin, W. Harder, K.H. Schleifer (Eds.).
    • (1992) The Prokaryotes , pp. 3353-3378
    • Widdel, F.1    Bak, F.2
  • 54
    • 0342288105 scopus 로고
    • Bioaugmentation and transformation of carbon tetrachloride in a model aquifer
    • Battelle Press, Columbus, R.E. Hinchee, J. Fredrickson, B.C. Alleman (Eds.)
    • Witt M.E., Dybas M.J., Heine R.L., Nair S., Criddle C.S., Wiggert D.C. Bioaugmentation and transformation of carbon tetrachloride in a model aquifer. Bioaugmentation for Site Remediation 1995, 221-227. Battelle Press, Columbus. R.E. Hinchee, J. Fredrickson, B.C. Alleman (Eds.).
    • (1995) Bioaugmentation for Site Remediation , pp. 221-227
    • Witt, M.E.1    Dybas, M.J.2    Heine, R.L.3    Nair, S.4    Criddle, C.S.5    Wiggert, D.C.6
  • 55
    • 77956445488 scopus 로고    scopus 로고
    • Bioremediation of crude oil-contaminated soil: comparison of different biostimulation and bioaugmentation treatments
    • Xu Y., Lu M. Bioremediation of crude oil-contaminated soil: comparison of different biostimulation and bioaugmentation treatments. J.Hazarad. Mater. 2010, 183:395-401.
    • (2010) J.Hazarad. Mater. , vol.183 , pp. 395-401
    • Xu, Y.1    Lu, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.