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Volumn 8, Issue 1, 2014, Pages 32-

Next Generation Sequencing Reveals Regulation of Distinct Aedes microRNAs during Chikungunya Virus Development

Author keywords

[No Author keywords available]

Indexed keywords

MICRORNA; MICRORNA 281 5P; MICRORNA 2B; MICRORNA 75P; MICRORNA 927; UNCLASSIFIED DRUG;

EID: 84893753522     PISSN: 19352727     EISSN: 19352735     Source Type: Journal    
DOI: 10.1371/journal.pntd.0002616     Document Type: Article
Times cited : (65)

References (40)
  • 4
    • 84879691685 scopus 로고    scopus 로고
    • orco mutant mosquitoes lose strong preference for humans and are not repelled by volatile DEET
    • DeGennaro M, McBride CS, Seeholzer L, Nakagawa T, Dennis EJ, et al. (2013) orco mutant mosquitoes lose strong preference for humans and are not repelled by volatile DEET. Nature 498: 487-491.
    • (2013) Nature , vol.498 , pp. 487-491
    • DeGennaro, M.1    McBride, C.S.2    Seeholzer, L.3    Nakagawa, T.4    Dennis, E.J.5
  • 6
    • 84864027333 scopus 로고    scopus 로고
    • Anopheles gambiae pathogen susceptibility: the intersection of genetics, immunity and ecology
    • Mitri C, Vernick KD, (2012) Anopheles gambiae pathogen susceptibility: the intersection of genetics, immunity and ecology. Curr Opin Microbiol 15: 285-291.
    • (2012) Curr Opin Microbiol , vol.15 , pp. 285-291
    • Mitri, C.1    Vernick, K.D.2
  • 7
    • 64849109588 scopus 로고    scopus 로고
    • Leucine-rich repeat protein complex activates mosquito complement in defense against Plasmodium parasites
    • Povelones M, Waterhouse RM, Kafatos FC, Christophides GK, (2009) Leucine-rich repeat protein complex activates mosquito complement in defense against Plasmodium parasites. Science 324: 258-261.
    • (2009) Science , vol.324 , pp. 258-261
    • Povelones, M.1    Waterhouse, R.M.2    Kafatos, F.C.3    Christophides, G.K.4
  • 8
    • 84878958300 scopus 로고    scopus 로고
    • Vector transmission regulates immune control of Plasmodium virulence
    • Spence PJ, Jarra W, Levy P, Reid AJ, Chappell L, et al. (2013) Vector transmission regulates immune control of Plasmodium virulence. Nature 498: 228-231.
    • (2013) Nature , vol.498 , pp. 228-231
    • Spence, P.J.1    Jarra, W.2    Levy, P.3    Reid, A.J.4    Chappell, L.5
  • 9
    • 37849052513 scopus 로고    scopus 로고
    • A single mutation in chikungunya virus affects vector specificity and epidemic potential
    • Tsetsarkin KA, Vanlandingham DL, McGee CE, Higgs S, (2007) A single mutation in chikungunya virus affects vector specificity and epidemic potential. PLoS Pathog 3: e201.
    • (2007) PLoS Pathog , vol.3
    • Tsetsarkin, K.A.1    Vanlandingham, D.L.2    McGee, C.E.3    Higgs, S.4
  • 10
    • 79953313277 scopus 로고    scopus 로고
    • Mosquito RNAi is the major innate immune pathway controlling arbovirus infection and transmission
    • Blair CD, (2011) Mosquito RNAi is the major innate immune pathway controlling arbovirus infection and transmission. Future Microbiol 6: 265-277.
    • (2011) Future Microbiol , vol.6 , pp. 265-277
    • Blair, C.D.1
  • 11
    • 34547587566 scopus 로고    scopus 로고
    • Antiviral immunity directed by small RNAs
    • Ding SW, Voinnet O, (2007) Antiviral immunity directed by small RNAs. Cell 130: 413-426.
    • (2007) Cell , vol.130 , pp. 413-426
    • Ding, S.W.1    Voinnet, O.2
  • 12
    • 84878201101 scopus 로고    scopus 로고
    • Small RNAs: a new frontier in mosquito biology
    • Lucas KJ, Myles KM, Raikhel AS, (2013) Small RNAs: a new frontier in mosquito biology. Trends Parasitol 29: 295-303.
    • (2013) Trends Parasitol , vol.29 , pp. 295-303
    • Lucas, K.J.1    Myles, K.M.2    Raikhel, A.S.3
  • 13
    • 61449132473 scopus 로고    scopus 로고
    • Dengue virus type 2 infections of Aedes aegypti are modulated by the mosquito's RNA interference pathway
    • Sanchez-Vargas I, Scott JC, Poole-Smith BK, Franz AW, Barbosa-Solomieu V, et al. (2009) Dengue virus type 2 infections of Aedes aegypti are modulated by the mosquito's RNA interference pathway. PLoS Pathog 5: e1000299.
    • (2009) PLoS Pathog , vol.5
    • Sanchez-Vargas, I.1    Scott, J.C.2    Poole-Smith, B.K.3    Franz, A.W.4    Barbosa-Solomieu, V.5
  • 14
    • 58149399344 scopus 로고    scopus 로고
    • Alphavirus-derived small RNAs modulate pathogenesis in disease vector mosquitoes
    • Myles KM, Wiley MR, Morazzani EM, Adelman ZN, (2008) Alphavirus-derived small RNAs modulate pathogenesis in disease vector mosquitoes. Proc Natl Acad Sci U S A 105: 19938-19943.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 19938-19943
    • Myles, K.M.1    Wiley, M.R.2    Morazzani, E.M.3    Adelman, Z.N.4
  • 15
    • 84857468000 scopus 로고    scopus 로고
    • Production of virus-derived ping-pong-dependent piRNA-like small RNAs in the mosquito soma
    • Morazzani EM, Wiley MR, Murreddu MG, Adelman ZN, Myles KM, (2012) Production of virus-derived ping-pong-dependent piRNA-like small RNAs in the mosquito soma. PLoS Pathog 8: e1002470.
    • (2012) PLoS Pathog , vol.8
    • Morazzani, E.M.1    Wiley, M.R.2    Murreddu, M.G.3    Adelman, Z.N.4    Myles, K.M.5
  • 17
    • 79959341707 scopus 로고    scopus 로고
    • Wolbachia uses host microRNAs to manipulate host gene expression and facilitate colonization of the dengue vector Aedes aegypti
    • Hussain M, Frentiu FD, Moreira LA, O'Neill SL, Asgari S, (2011) Wolbachia uses host microRNAs to manipulate host gene expression and facilitate colonization of the dengue vector Aedes aegypti. Proc Natl Acad Sci U S A 108: 9250-9255.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 9250-9255
    • Hussain, M.1    Frentiu, F.D.2    Moreira, L.A.3    O'Neill, S.L.4    Asgari, S.5
  • 18
    • 77957151975 scopus 로고    scopus 로고
    • Impact of microRNAs for pathogenesis and treatment of hepatitis C virus infection
    • Pfeffer S, Baumert TF, (2010) Impact of microRNAs for pathogenesis and treatment of hepatitis C virus infection. Gastroenterol Clin Biol 34: 431-435.
    • (2010) Gastroenterol Clin Biol , vol.34 , pp. 431-435
    • Pfeffer, S.1    Baumert, T.F.2
  • 19
    • 36749036028 scopus 로고    scopus 로고
    • Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion
    • Winter F, Edaye S, Huttenhofer A, Brunel C, (2007) Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion. Nucleic Acids Res 35: 6953-6962.
    • (2007) Nucleic Acids Res , vol.35 , pp. 6953-6962
    • Winter, F.1    Edaye, S.2    Huttenhofer, A.3    Brunel, C.4
  • 20
    • 0038343499 scopus 로고    scopus 로고
    • MicroRNA pathways in flies and worms: Growth, death, fat, stress, and timing
    • Ambros V, (2003) MicroRNA pathways in flies and worms: Growth, death, fat, stress, and timing. Cell 113: 673-676.
    • (2003) Cell , vol.113 , pp. 673-676
    • Ambros, V.1
  • 21
    • 78650729085 scopus 로고    scopus 로고
    • MicroRNAs in Drosophila development
    • Chawla G, Sokol NS, (2011) MicroRNAs in Drosophila development. Int Rev Cell Mol Biol 286: 1-65.
    • (2011) Int Rev Cell Mol Biol , vol.286 , pp. 1-65
    • Chawla, G.1    Sokol, N.S.2
  • 23
    • 84861373536 scopus 로고    scopus 로고
    • Genetic characterization of Chikungunya virus from New Delhi reveal emergence of a new molecular signature in Indian isolates
    • Shrinet J, Jain S, Sharma A, Singh SS, Mathur K, et al. (2012) Genetic characterization of Chikungunya virus from New Delhi reveal emergence of a new molecular signature in Indian isolates. Virol J 9: 100.
    • (2012) Virol J , vol.9 , pp. 100
    • Shrinet, J.1    Jain, S.2    Sharma, A.3    Singh, S.S.4    Mathur, K.5
  • 25
    • 77949601825 scopus 로고    scopus 로고
    • CD-HIT Suite: a web server for clustering and comparing biological sequences
    • Huang Y, Niu B, Gao Y, Fu L, Li W, (2010) CD-HIT Suite: a web server for clustering and comparing biological sequences. Bioinformatics 26: 680-682.
    • (2010) Bioinformatics , vol.26 , pp. 680-682
    • Huang, Y.1    Niu, B.2    Gao, Y.3    Fu, L.4    Li, W.5
  • 26
    • 33846056835 scopus 로고    scopus 로고
    • fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences
    • Kin T, Yamada K, Terai G, Okida H, Yoshinari Y, et al. (2007) fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences. Nucleic Acids Res 35: D145-148.
    • (2007) Nucleic Acids Res , vol.35
    • Kin, T.1    Yamada, K.2    Terai, G.3    Okida, H.4    Yoshinari, Y.5
  • 27
    • 84858286227 scopus 로고    scopus 로고
    • VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics
    • Megy K, Emrich SJ, Lawson D, Campbell D, Dialynas E, et al. (2012) VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics. Nucleic Acids Res 40: D729-734.
    • (2012) Nucleic Acids Res , vol.40
    • Megy, K.1    Emrich, S.J.2    Lawson, D.3    Campbell, D.4    Dialynas, E.5
  • 28
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL, (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25.
    • (2009) Genome Biol , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 30
    • 33747849920 scopus 로고    scopus 로고
    • RNAhybrid: microRNA target prediction easy, fast and flexible
    • Kruger J, Rehmsmeier M, (2006) RNAhybrid: microRNA target prediction easy, fast and flexible. Nucleic Acids Res 34: W451-454.
    • (2006) Nucleic Acids Res , vol.34
    • Kruger, J.1    Rehmsmeier, M.2
  • 31
    • 79959986975 scopus 로고    scopus 로고
    • KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases
    • Xie C, Mao X, Huang J, Ding Y, Wu J, et al. (2011) KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases. Nucleic Acids Res 39: W316-322.
    • (2011) Nucleic Acids Res , vol.39
    • Xie, C.1    Mao, X.2    Huang, J.3    Ding, Y.4    Wu, J.5
  • 32
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2.8: new features for data integration and network visualization
    • Smoot ME, Ono K, Ruscheinski J, Wang PL, Ideker T, (2011) Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics 27: 431-432.
    • (2011) Bioinformatics , vol.27 , pp. 431-432
    • Smoot, M.E.1    Ono, K.2    Ruscheinski, J.3    Wang, P.L.4    Ideker, T.5
  • 33
    • 77949470329 scopus 로고    scopus 로고
    • Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    • Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR, (2010) Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus. BMC Genomics 11: 119.
    • (2010) BMC Genomics , vol.11 , pp. 119
    • Skalsky, R.L.1    Vanlandingham, D.L.2    Scholle, F.3    Higgs, S.4    Cullen, B.R.5
  • 34
    • 67650249494 scopus 로고    scopus 로고
    • miR-184 has multiple roles in Drosophila female germline development
    • Iovino N, Pane A, Gaul U, (2009) miR-184 has multiple roles in Drosophila female germline development. Dev Cell 17: 123-133.
    • (2009) Dev Cell , vol.17 , pp. 123-133
    • Iovino, N.1    Pane, A.2    Gaul, U.3
  • 35
    • 37049037102 scopus 로고    scopus 로고
    • ERK- and JNK-dependent signaling pathways contribute to Bombyx mori nucleopolyhedrovirus infection
    • Katsuma S, Mita K, Shimada T, (2007) ERK- and JNK-dependent signaling pathways contribute to Bombyx mori nucleopolyhedrovirus infection. J Virol 81: 13700-13709.
    • (2007) J Virol , vol.81 , pp. 13700-13709
    • Katsuma, S.1    Mita, K.2    Shimada, T.3
  • 36
    • 0035090589 scopus 로고    scopus 로고
    • Influenza virus propagation is impaired by inhibition of the Raf/MEK/ERK signalling cascade
    • Pleschka S, Wolff T, Ehrhardt C, Hobom G, Planz O, et al. (2001) Influenza virus propagation is impaired by inhibition of the Raf/MEK/ERK signalling cascade. Nat Cell Biol 3: 301-305.
    • (2001) Nat Cell Biol , vol.3 , pp. 301-305
    • Pleschka, S.1    Wolff, T.2    Ehrhardt, C.3    Hobom, G.4    Planz, O.5
  • 37
    • 84883794126 scopus 로고    scopus 로고
    • ERK signaling couples nutrient status to antiviral defense in the insect gut
    • Xu J, Hopkins K, Sabin L, Yasunaga A, Subramanian H, et al. (2013) ERK signaling couples nutrient status to antiviral defense in the insect gut. Proc Natl Acad Sci U S A 110: 15025-15030.
    • (2013) Proc Natl Acad Sci U S A , vol.110 , pp. 15025-15030
    • Xu, J.1    Hopkins, K.2    Sabin, L.3    Yasunaga, A.4    Subramanian, H.5
  • 38
    • 84874368710 scopus 로고    scopus 로고
    • Grb2 controls phosphorylation of FGFR2 by inhibiting receptor kinase and Shp2 phosphatase activity
    • Ahmed Z, Lin CC, Suen KM, Melo FA, Levitt JA, et al. (2013) Grb2 controls phosphorylation of FGFR2 by inhibiting receptor kinase and Shp2 phosphatase activity. J Cell Biol 200: 493-504.
    • (2013) J Cell Biol , vol.200 , pp. 493-504
    • Ahmed, Z.1    Lin, C.C.2    Suen, K.M.3    Melo, F.A.4    Levitt, J.A.5
  • 39
    • 0033545996 scopus 로고    scopus 로고
    • NS5A, a nonstructural protein of hepatitis C virus, binds growth factor receptor-bound protein 2 adaptor protein in a Src homology 3 domain/ligand-dependent manner and perturbs mitogenic signaling
    • Tan SL, Nakao H, He Y, Vijaysri S, Neddermann P, et al. (1999) NS5A, a nonstructural protein of hepatitis C virus, binds growth factor receptor-bound protein 2 adaptor protein in a Src homology 3 domain/ligand-dependent manner and perturbs mitogenic signaling. Proc Natl Acad Sci U S A 96: 5533-5538.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 5533-5538
    • Tan, S.L.1    Nakao, H.2    He, Y.3    Vijaysri, S.4    Neddermann, P.5
  • 40
    • 84863165309 scopus 로고    scopus 로고
    • GRB2 interaction with the ecotropic murine leukemia virus receptor, mCAT-1, controls virus entry and is stimulated by virus binding
    • Chen Z, Kolokoltsov AA, Wang J, Adhikary S, Lorinczi M, et al. (2012) GRB2 interaction with the ecotropic murine leukemia virus receptor, mCAT-1, controls virus entry and is stimulated by virus binding. J Virol 86: 1421-1432.
    • (2012) J Virol , vol.86 , pp. 1421-1432
    • Chen, Z.1    Kolokoltsov, A.A.2    Wang, J.3    Adhikary, S.4    Lorinczi, M.5


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