-
1
-
-
0030801746
-
The structure of amyloid fibrils by electron microscopy and X-ray diffraction
-
Sunde M, Blake C. The structure of amyloid fibrils by electron microscopy and X-ray diffraction. Adv Protein Chem 1997;50:123-159.
-
(1997)
Adv Protein Chem
, vol.50
, pp. 123-159
-
-
Sunde, M.1
Blake, C.2
-
2
-
-
0037168655
-
A structural model for Alzheimer's beta-amyloid fibrils based on experimental constraints from solid state NMR
-
Petkova AT, Ishii Y, Balbach JJ, Antzutkin ON, Leapman RD, Delaglio F, Tycko R. A structural model for Alzheimer's beta-amyloid fibrils based on experimental constraints from solid state NMR. Proc Natl Acad Sci USA 2002;99:16742-16747.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 16742-16747
-
-
Petkova, A.T.1
Ishii, Y.2
Balbach, J.J.3
Antzutkin, O.N.4
Leapman, R.D.5
Delaglio, F.6
Tycko, R.7
-
3
-
-
28444442999
-
3D structure of Alzheimer's amyloid-beta(1-42) fibrils
-
Lührs T, Ritter C, Adrian M, Riek-Loher D, Bohrmann B, Döbeli H, Schubert D, Riek R. 3D structure of Alzheimer's amyloid-beta(1-42) fibrils. Proc Natl Acad Sci USA 2005;102:17342-17347.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 17342-17347
-
-
Lührs, T.1
Ritter, C.2
Adrian, M.3
Riek-Loher, D.4
Bohrmann, B.5
Döbeli, H.6
Schubert, D.7
Riek, R.8
-
4
-
-
62349083169
-
Protein misfolding and aggregation in ageing and disease: molecular processes and therapeutic perspectives
-
Tuite MF, Melki R. Protein misfolding and aggregation in ageing and disease: molecular processes and therapeutic perspectives. Prion 2007;1:116-120.
-
(2007)
Prion
, vol.1
, pp. 116-120
-
-
Tuite, M.F.1
Melki, R.2
-
5
-
-
35148865232
-
On the structural definition of amyloid fibrils and other polypeptide aggregates
-
Fändrich M. On the structural definition of amyloid fibrils and other polypeptide aggregates. Cell Mol Life Sci 2007;64:2066-2078.
-
(2007)
Cell Mol Life Sci
, vol.64
, pp. 2066-2078
-
-
Fändrich, M.1
-
6
-
-
77949848854
-
Prion-like transmission of protein aggregates in neurodegenerative diseases
-
Brundin P, Melki R, Kopito R. Prion-like transmission of protein aggregates in neurodegenerative diseases. Nat Rev Mol Cell Biol 2010;11:301-307.
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, pp. 301-307
-
-
Brundin, P.1
Melki, R.2
Kopito, R.3
-
7
-
-
0030885650
-
The protein product of the het-s heterokaryon incompatibility gene of the fungus podospora anserina behaves as a prion analog
-
Coustou V, Deleu C, Saupe S, Begueret J. The protein product of the het-s heterokaryon incompatibility gene of the fungus podospora anserina behaves as a prion analog. Proc Natl Acad Sci USA 1997;94:9773-9778.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 9773-9778
-
-
Coustou, V.1
Deleu, C.2
Saupe, S.3
Begueret, J.4
-
8
-
-
84871682946
-
The mechanism of toxicity in HET-S/HET-s prion incompatibility
-
Seuring C, Greenwald J, Wasmer C, Wepf R, Saupe SJ, Meier BH, Riek R. The mechanism of toxicity in HET-S/HET-s prion incompatibility. PLoS Biol 2012;10:e1001451.
-
(2012)
PLoS Biol
, vol.10
-
-
Seuring, C.1
Greenwald, J.2
Wasmer, C.3
Wepf, R.4
Saupe, S.J.5
Meier, B.H.6
Riek, R.7
-
9
-
-
40849120669
-
Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core
-
Wasmer C, Lange A, Van Melckebeke H, Siemer AB, Riek R, Meier BH. Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core. Science 2008;319:1523-1526.
-
(2008)
Science
, vol.319
, pp. 1523-1526
-
-
Wasmer, C.1
Lange, A.2
Van Melckebeke, H.3
Siemer, A.B.4
Riek, R.5
Meier, B.H.6
-
10
-
-
70349560022
-
A combined solid-state NMR and MD characterization of the stability and dynamics of the HET-s(218-289) prion in its amyloid conformation
-
Lange A, Gattin Z, Van Melckebeke H, Wasmer C, Soragni A, van Gunsteren WF, Meier BH. A combined solid-state NMR and MD characterization of the stability and dynamics of the HET-s(218-289) prion in its amyloid conformation. Chembiochem 2009;10:1657-1665.
-
(2009)
Chembiochem
, vol.10
, pp. 1657-1665
-
-
Lange, A.1
Gattin, Z.2
Van Melckebeke, H.3
Wasmer, C.4
Soragni, A.5
van Gunsteren, W.F.6
Meier, B.H.7
-
11
-
-
53549129515
-
Infectious and noninfectious amyloids of the HET-s(218-289) prion have different NMR spectra
-
Wasmer C, Soragni A, Sabaté R, Lange A, Riek R, Meier BH. Infectious and noninfectious amyloids of the HET-s(218-289) prion have different NMR spectra. Angew Chem Int Ed Engl 2008;47:5839-5841.
-
(2008)
Angew Chem Int Ed Engl
, vol.47
, pp. 5839-5841
-
-
Wasmer, C.1
Soragni, A.2
Sabaté, R.3
Lange, A.4
Riek, R.5
Meier, B.H.6
-
12
-
-
84893782552
-
-
Halle an der Saale, Germany, P III-25
-
Soragni A, Wasmer C, Saupe SJ, Meier BH, Riek R. Infectious and non-infectious amyloids of the HET-s(218-289) prion: insights into assembly kinetic and structure of non-transmissible conformers. Structure of Amyloid Fibrils and Mechansim of their Formation, Halle an der Saale, Germany, P III-25. 2009.
-
(2009)
Infectious and non-infectious amyloids of the HET-s(218-289) prion: insights into assembly kinetic and structure of non-transmissible conformers. Structure of Amyloid Fibrils and Mechansim of their Formation
-
-
Soragni, A.1
Wasmer, C.2
Saupe, S.J.3
Meier, B.H.4
Riek, R.5
-
13
-
-
0035964342
-
Electrostatics of nanosystems: application to microtubules and the ribosome
-
Baker NA, Sept D, Joseph S, Holst MJ, McCammon JA. Electrostatics of nanosystems: application to microtubules and the ribosome. Proc Natl Acad Sci USA 2001;98:10037-10041.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
15
-
-
27344454932
-
Gromacs: fast, flexible, and free
-
van der Spoel D, Lindahl E, Hess B, Groenhof G, Mark AE, Berendsen HJC. Gromacs: fast, flexible, and free. J Comput Chem 2005;26:1701-1718.
-
(2005)
J Comput Chem
, vol.26
, pp. 1701-1718
-
-
van der Spoel, D.1
Lindahl, E.2
Hess, B.3
Groenhof, G.4
Mark, A.E.5
Berendsen, H.J.C.6
-
16
-
-
0029912748
-
Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids
-
Jorgensen WL, Maxwell DS, Tirado-Rives J. Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids. J Am Chem Soc 1996;118:11225-11236.
-
(1996)
J Am Chem Soc
, vol.118
, pp. 11225-11236
-
-
Jorgensen, W.L.1
Maxwell, D.S.2
Tirado-Rives, J.3
-
17
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen WL, Chandrasekhar J, Madura JD, Impey RW, Klein ML. Comparison of simple potential functions for simulating liquid water. J Chem Phys 1983;79:926-935.
-
(1983)
J Chem Phys
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
18
-
-
0344796204
-
Ion-water interaction potentials derived from free energy perturbation simulations
-
Åqvist J. Ion-water interaction potentials derived from free energy perturbation simulations. J Chem Phys 1990;94:8021-8024.
-
(1990)
J Chem Phys
, vol.94
, pp. 8021-8024
-
-
Åqvist, J.1
-
19
-
-
0021376732
-
Energy component analysis for the hydration of Li+, Na+, F-, and Cl-
-
Chandrasekhar J, Spellmeyer DC, Jorgensen WL. Energy component analysis for the hydration of Li+, Na+, F-, and Cl-. J Am Chem Soc 1984;106:903-910.
-
(1984)
J Am Chem Soc
, vol.106
, pp. 903-910
-
-
Chandrasekhar, J.1
Spellmeyer, D.C.2
Jorgensen, W.L.3
-
21
-
-
84986440341
-
SETTLE: an analytical version of the SHAKE and RATTLE algorithms for rigid water models
-
Miyamoto S, Kollman PA. SETTLE: an analytical version of the SHAKE and RATTLE algorithms for rigid water models. J Comp Chem 1992;13:952-962.
-
(1992)
J Comp Chem
, vol.13
, pp. 952-962
-
-
Miyamoto, S.1
Kollman, P.A.2
-
22
-
-
0001585978
-
Improving efficiency of large time-scale molecular dynamics simulations of hydrogen-rich systems
-
Feenstra KA, Hess B, Berendsen HJC. Improving efficiency of large time-scale molecular dynamics simulations of hydrogen-rich systems. J Comput Chem 1999;20:786-798.
-
(1999)
J Comput Chem
, vol.20
, pp. 786-798
-
-
Feenstra, K.A.1
Hess, B.2
Berendsen, H.J.C.3
-
23
-
-
33846086933
-
Canonical sampling through velocity rescaling
-
Bussi G, Donadio D, Parrinello M. Canonical sampling through velocity rescaling. J Chem Phys 2007;126:014101.
-
(2007)
J Chem Phys
, vol.126
, pp. 014101
-
-
Bussi, G.1
Donadio, D.2
Parrinello, M.3
-
25
-
-
33846823909
-
Particle mesh ewald: an N-log(N) method for ewald sums in large systems
-
Darden T, York D, Pedersen L. Particle mesh ewald: an N-log(N) method for ewald sums in large systems. J Chem Phys 1993;98:10089-10092.
-
(1993)
J Chem Phys
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
26
-
-
0020997912
-
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch W, Sander C. Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 1983;22:2577-2637.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
27
-
-
78650914809
-
Probing water accessibility in HET-s(218-289) amyloid fibrils by solid-state NMR
-
Van Melckebeke H, Schanda P, Gath J, Wasmer C, Verel R, Lange A, Meier BH, Böckmann A. Probing water accessibility in HET-s(218-289) amyloid fibrils by solid-state NMR. J Mol Biol 2011;405:765-772.
-
(2011)
J Mol Biol
, vol.405
, pp. 765-772
-
-
Van Melckebeke, H.1
Schanda, P.2
Gath, J.3
Wasmer, C.4
Verel, R.5
Lange, A.6
Meier, B.H.7
Böckmann, A.8
-
28
-
-
80053943942
-
Fibril elongation mechanisms of HET-s prion-forming domain: topological evidence for growth polarity
-
Baiesi M, Seno F, Trovato A. Fibril elongation mechanisms of HET-s prion-forming domain: topological evidence for growth polarity. Proteins 2011;79:3067-3081.
-
(2011)
Proteins
, vol.79
, pp. 3067-3081
-
-
Baiesi, M.1
Seno, F.2
Trovato, A.3
-
29
-
-
0038219626
-
Domain organization and structure-function relationship of the het-s prion protein of podospora anserina
-
Available at: URL
-
Balguerie A, Dos Reis S, Ritter C, Chaignepain S, Coulary-Salin B, Forge V, Bathany K, Lascu I, Schmitter JM, Riek R, Saupe SJ. Domain organization and structure-function relationship of the het-s prion protein of podospora anserina. EMBO J 2003;22:2071-2081. Available at: URL http://www.hubmed.org/display.cgi?uids=12727874.
-
(2003)
EMBO J
, vol.22
, pp. 2071-2081
-
-
Balguerie, A.1
Dos Reis, S.2
Ritter, C.3
Chaignepain, S.4
Coulary-Salin, B.5
Forge, V.6
Bathany, K.7
Lascu, I.8
Schmitter, J.M.9
Riek, R.10
Saupe, S.J.11
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