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Journal of Virology
Volumn 88, Issue 4, 2014, Pages 2107-2115
Lysis delay and burst shrinkage of coliphage T7 by deletion of terminator Tφ reversed by deletion of early genes
Author keywords

[No Author keywords available]
Indexed keywords

BACTERIOPHAGE T7; BLOTTING, NORTHERN; DIRECTED MOLECULAR EVOLUTION; DNA PRIMERS; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, VIRAL; GENOME, VIRAL; MUTATION; SEQUENCE DELETION; TERMINATOR REGIONS, GENETIC; VIRAL PROTEINS; VIRUS RELEASE;
EID: 84893498616     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.03274-13     Document Type: Article
Times cited : (22)
References (33)
  • 1
    • 21844441735 scopus 로고    scopus 로고
    • The T7 group
    • Calendar R (ed). The Oxford University Press, Oxford, United Kingdom.
    • Molineux I. 2006. The T7 group, p 277-301. In Calendar R (ed), The bacteriophages. The Oxford University Press, Oxford, United Kingdom.
    • (2006) The bacteriophages , pp. 277-301
    • Molineux, I.1
  • 2
    • 54949100000 scopus 로고    scopus 로고
    • The structure of a transcribing T7 RNA polymerase in transition from initiation to elongation
    • Durniak KJ, Bailey S, Steitz TA. 2008. The structure of a transcribing T7 RNA polymerase in transition from initiation to elongation. Science 322: 553-557. http://dx.doi.org/10.1126/science.1163433.
    • (2008) Science , vol.322 , pp. 553-557
    • Durniak, K.J.1    Bailey, S.2    Steitz, T.A.3
  • 3
    • 78049415499 scopus 로고    scopus 로고
    • Tiny abortive initiation transcripts exert antitermination activity on an RNA hairpin-dependent intrinsic terminator
    • Lee S, Nguyen HM, Kang C. 2010. Tiny abortive initiation transcripts exert antitermination activity on an RNA hairpin-dependent intrinsic terminator. Nucleic Acids Res. 38:6045-6053. http://dx.doi.org/10.1093/nar/gkq450.
    • (2010) Nucleic Acids Res. , vol.38 , pp. 6045-6053
    • Lee, S.1    Nguyen, H.M.2    Kang, C.3
  • 4
    • 0028309022 scopus 로고
    • Characterization of two types of termination signal for bacteriophage T7 RNA polymerase
    • Macdonald LE, Durbin RK, Dunn JJ, Mcallister WT. 1994. Characterization of two types of termination signal for bacteriophage T7 RNA polymerase. J. Mol. Biol. 238:145-158. http://dx.doi.org/10.1006/jmbi.1994.1277.
    • (1994) J. Mol. Biol. , vol.238 , pp. 145-158
    • Macdonald, L.E.1    Durbin, R.K.2    Dunn, J.J.3    Mcallister, W.T.4
  • 5
    • 0035830827 scopus 로고    scopus 로고
    • Two site contact of elongating transcripts to phage T7RNApolymerase at C-terminal regions
    • Shen H, Kang C. 2001. Two site contact of elongating transcripts to phage T7RNApolymerase at C-terminal regions. J. Biol. Chem. 276:4080-4084. http://dx.doi.org/10.1074/jbc.M008616200.
    • (2001) J. Biol. Chem. , vol.276 , pp. 4080-4084
    • Shen, H.1    Kang, C.2
  • 7
    • 0030445322 scopus 로고    scopus 로고
    • Increased stability of phage T7g10 mRNA is mediated by either a 5'-or a 3'-terminal stem-loop structure
    • Mertens N, Remaut E, Fiers W. 1996. Increased stability of phage T7g10 mRNA is mediated by either a 5'-or a 3'-terminal stem-loop structure. Biol. Chem. 377:811-817.
    • (1996) Biol. Chem. , vol.377 , pp. 811-817
    • Mertens, N.1    Remaut, E.2    Fiers, W.3
  • 9
    • 0026048052 scopus 로고
    • An analysis of sequences stimulating frameshifting in the decoding of gene 10 of bacteriophage T7
    • Condron BG, Gesteland RF, Atkins JF. 1991. An analysis of sequences stimulating frameshifting in the decoding of gene 10 of bacteriophage T7. Nucleic Acids Res. 19:5607-5612. http://dx.doi.org/10.1093/nar/19.20.5607.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 5607-5612
    • Condron, B.G.1    Gesteland, R.F.2    Atkins, J.F.3
  • 10
    • 24744451431 scopus 로고    scopus 로고
    • Evolutionary robustness of an optimal phenotype: re-evolution of lysis in a bacteriophage deleted for its lysin gene
    • Heineman RH, Molineux IJ, Bull JJ. 2005. Evolutionary robustness of an optimal phenotype: re-evolution of lysis in a bacteriophage deleted for its lysin gene. J. Mol. Evol. 61:181-191. http://dx.doi.org/10.1007/s00239-004-0304-4.
    • (2005) J. Mol. Evol. , vol.61 , pp. 181-191
    • Heineman, R.H.1    Molineux, I.J.2    Bull, J.J.3
  • 11
    • 35048873167 scopus 로고    scopus 로고
    • Rz/Rz1 lysis gene equivalents in phages of Gram-negative hosts
    • Summer EJ, Berry J, Tran TA, Niu L, Struck DK, Young R. 2007. Rz/Rz1 lysis gene equivalents in phages of Gram-negative hosts. J. Mol. Biol. 373: 1098-1112. http://dx.doi.org/10.1016/j.jmb.2007.08.045.
    • (2007) J. Mol. Biol. , vol.373 , pp. 1098-1112
    • Summer, E.J.1    Berry, J.2    Tran, T.A.3    Niu, L.4    Struck, D.K.5    Young, R.6
  • 13
    • 28544433105 scopus 로고    scopus 로고
    • Refactoring bacteriophage T7
    • Chan LY, Kosuri S, Endy D. 2005. Refactoring bacteriophage T7. Mol. Syst. Biol. 1:2005.0018. http://dx.doi.org/10.1038/msb4100025.
    • (2005) Mol. Syst. Biol. , vol.1
    • Chan, L.Y.1    Kosuri, S.2    Endy, D.3
  • 14
    • 66249122082 scopus 로고    scopus 로고
    • Layers of evolvability in a bacteriophage life history trait
    • Heineman RH, Bull JJ, Molineux IJ. 2009. Layers of evolvability in a bacteriophage life history trait. Mol. Biol. Evol. 26:1289-1298. http://dx.doi.org/10.1093/molbev/msp037.
    • (2009) Mol. Biol. Evol. , vol.26 , pp. 1289-1298
    • Heineman, R.H.1    Bull, J.J.2    Molineux, I.J.3
  • 15
    • 0030633107 scopus 로고    scopus 로고
    • Differential screening of differential display cDNA products by reverse northern
    • Zhang H, Zhang R, Liang P. 1997. Differential screening of differential display cDNA products by reverse northern. Methods Mol. Biol. 85:87-93.
    • (1997) Methods Mol. Biol. , vol.85 , pp. 87-93
    • Zhang, H.1    Zhang, R.2    Liang, P.3
  • 16
    • 0035461237 scopus 로고    scopus 로고
    • Bacteriophage latent-period evolution as a response to resource availability
    • Abedon ST, Herschler TD, Stopar D. 2001. Bacteriophage latent-period evolution as a response to resource availability. Appl. Environ. Microbiol. 67:4233-4241. http://dx.doi.org/10.1128/AEM.67.9.4233-4241.2001.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 4233-4241
    • Abedon, S.T.1    Herschler, T.D.2    Stopar, D.3
  • 17
    • 2142693752 scopus 로고    scopus 로고
    • Experimental examination of bacteriophage latent-period evolution as a response to bacterial availability
    • Abedon ST, Hyman P, Thomas C. 2003. Experimental examination of bacteriophage latent-period evolution as a response to bacterial availability. Appl. Environ. Microbiol. 69:7499-7506. http://dx.doi.org/10.1128/AEM.69.12.7499-7506.2003.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 7499-7506
    • Abedon, S.T.1    Hyman, P.2    Thomas, C.3
  • 18
    • 34347354221 scopus 로고    scopus 로고
    • Testing optimality with experimental evo-lution: lysis time in a bacteriophage
    • Heineman RH, Bull JJ. 2007. Testing optimality with experimental evo-lution: lysis time in a bacteriophage. Evolution 61:1695-1709. http://dx.doi.org/10.1111/j.1558-5646.2007.00132.x.
    • (2007) Evolution , vol.61 , pp. 1695-1709
    • Heineman, R.H.1    Bull, J.J.2
  • 19
    • 33644778734 scopus 로고    scopus 로고
    • Lysis timing and bacteriophage fitness
    • Wang IN. 2006. Lysis timing and bacteriophage fitness. Genetics 172:17-26. http://dx.doi.org/10.1534/genetics.105.045922.
    • (2006) Genetics , vol.172 , pp. 17-26
    • Wang, I.N.1
  • 20
    • 0029911008 scopus 로고    scopus 로고
    • The evolution of phage lysis timing
    • Wang IN, Dykhuizen DE, Slobodkin LB. 1996. The evolution of phage lysis timing. Evol. Ecol. 10:545-558. http://dx.doi.org/10.1007/BF01237884.
    • (1996) Evol. Ecol. , vol.10 , pp. 545-558
    • Wang, I.N.1    Dykhuizen, D.E.2    Slobodkin, L.B.3
  • 21
    • 56049107073 scopus 로고    scopus 로고
    • Bacteriophage adsorption rate and optimal lysis time
    • Shao Y, Wang IN. 2008. Bacteriophage adsorption rate and optimal lysis time. Genetics 180:471-482. http://dx.doi.org/10.1534/genetics.108.090100.
    • (2008) Genetics , vol.180 , pp. 471-482
    • Shao, Y.1    Wang, I.N.2
  • 22
    • 0026800935 scopus 로고
    • Bacteriophage lysis: mechanism and regulation
    • Young R. 1992. Bacteriophage lysis: mechanism and regulation. Microbiol. Rev. 56:430-481.
    • (1992) Microbiol. Rev. , vol.56 , pp. 430-481
    • Young, R.1
  • 23
    • 34347407385 scopus 로고    scopus 로고
    • Clocking out: modeling phage-induced lysis of Escherichia coli
    • Ryan GL, Rutenberg AD. 2007. Clocking out: modeling phage-induced lysis of Escherichia coli. J. Bacteriol. 189:4749-4755. http://dx.doi.org/10.1128/JB.00392-07.
    • (2007) J. Bacteriol. , vol.189 , pp. 4749-4755
    • Ryan, G.L.1    Rutenberg, A.D.2
  • 24
    • 0034654341 scopus 로고    scopus 로고
    • Functional analysis of heterologous holin proteins in a lambdaDeltaS genetic background
    • Vukov N, Scherer S, Hibbert E, Loessner MJ. 2000. Functional analysis of heterologous holin proteins in a lambdaDeltaS genetic background. FEMS Microbiol. Lett. 184:179-186. http://dx.doi.org/10.1016/S0378-1097(00)00041-0.
    • (2000) FEMS Microbiol. Lett. , vol.184 , pp. 179-186
    • Vukov, N.1    Scherer, S.2    Hibbert, E.3    Loessner, M.J.4
  • 25
    • 0037310365 scopus 로고    scopus 로고
    • Sizing the holin lesion with an endolysin-beta-galactosidase fusion
    • Wang IN, Deaton J, Young R. 2003. Sizing the holin lesion with an endolysin-beta-galactosidase fusion. J. Bacteriol. 185:779-787. http://dx.doi.org/10.1128/JB.185.3.779-787.2003.
    • (2003) J. Bacteriol. , vol.185 , pp. 779-787
    • Wang, I.N.1    Deaton, J.2    Young, R.3
  • 26
    • 0023645010 scopus 로고
    • Lysis gene of bacteriophage MS2 is activated by translation termination at the overlapping coat gene
    • Berkhout B, van Strien SBA, van Boom J, van Westrenen J, van Duin J. 1987. Lysis gene of bacteriophage MS2 is activated by translation termination at the overlapping coat gene. J. Mol. Biol. 195:517-524. http://dx.doi.org/10.1016/0022-2836(87)90180-X.
    • (1987) J. Mol. Biol. , vol.195 , pp. 517-524
    • Berkhout, B.1    van Strien, S.B.A.2    van Boom, J.3    van Westrenen, J.4    van Duin, J.5
  • 27
    • 0031591384 scopus 로고    scopus 로고
    • Mechanism of inhibition of bacteriophage T7 RNA polymerase by T7 lysozyme
    • Zhang X, Studier FW. 1997. Mechanism of inhibition of bacteriophage T7 RNA polymerase by T7 lysozyme. J. Mol. Biol. 269:10-27. http://dx.doi.org/10.1006/jmbi.1997.1016.
    • (1997) J. Mol. Biol. , vol.269 , pp. 10-27
    • Zhang, X.1    Studier, F.W.2
  • 28
    • 0030842451 scopus 로고    scopus 로고
    • Forced evolution of a regulatory RNAhelix in the HIV-1 genome
    • Berkhout B, Klaver B, Das AT. 1997. Forced evolution of a regulatory RNAhelix in the HIV-1 genome. Nucleic Acids Res. 25:940-947. http://dx.doi.org/10.1093/nar/25.5.940.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 940-947
    • Berkhout, B.1    Klaver, B.2    Das, A.T.3
  • 29
    • 0028201045 scopus 로고
    • Leeway and constraints in the forced evolution of a regulatory RNA helix
    • Olsthoorn RC, Licis N, van Duin J. 1994. Leeway and constraints in the forced evolution of a regulatory RNA helix. EMBO J. 13:2660-2668.
    • (1994) EMBO J. , vol.13 , pp. 2660-2668
    • Olsthoorn, R.C.1    Licis, N.2    van Duin, J.3
  • 30
    • 0028178649 scopus 로고
    • Optimality models and the test of adaptationism
    • Orzack SHES. 1994. Optimality models and the test of adaptationism. Am. Nat. 143:361-380. http://dx.doi.org/10.1086/285608.
    • (1994) Am. Nat. , vol.143 , pp. 361-380
    • Orzack, S.H.E.S.1
  • 31
    • 0035445792 scopus 로고    scopus 로고
    • A relationship between gene expression and protein interactions on the proteome scale: analysis of the bacteriophage T7 and the yeast Saccharomyces cerevisiae
    • Grigoriev A. 2001. A relationship between gene expression and protein interactions on the proteome scale: analysis of the bacteriophage T7 and the yeast Saccharomyces cerevisiae. Nucleic Acids Res. 29:3513-3519. http://dx.doi.org/10.1093/nar/29.17.3513.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 3513-3519
    • Grigoriev, A.1
  • 32
    • 0035172545 scopus 로고    scopus 로고
    • Bacteriophage T7 protein kinase phosphorylates RNase E and stabilizes mRNAs synthesized by T7 RNA polymerase
    • Marchand I, Nicholson AW, Dreyfus M. 2001. Bacteriophage T7 protein kinase phosphorylates RNase E and stabilizes mRNAs synthesized by T7 RNA polymerase. Mol. Microbiol. 42:767-776. http://dx.doi.org/10.1046/j.1365-2958.2001.02668.x.
    • (2001) Mol. Microbiol. , vol.42 , pp. 767-776
    • Marchand, I.1    Nicholson, A.W.2    Dreyfus, M.3
  • 33
    • 0026650807 scopus 로고
    • Phosphorylation of Escherichia coli translation initiation factors by the bacteriophage T7 protein kinase
    • Robertson ES, Nicholson AW. 1992. Phosphorylation of Escherichia coli translation initiation factors by the bacteriophage T7 protein kinase. Biochemistry 31:4822-4827. http://dx.doi.org/10.1021/bi00135a012.
    • (1992) Biochemistry , vol.31 , pp. 4822-4827
    • Robertson, E.S.1    Nicholson, A.W.2

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